EnhancerDB
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  3. vista1349[chr1:42204198-42204327]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1349[chr1:42204198-42204327]
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Tissue distribution of vista1349
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Transcription factor that possibly regulate vista1349[chr1:42204198-42204327]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 42204188 42204200 PROX1 JASPAR yes 28415682
chr1 42204188 42204200 PROX1 JASPAR yes 118279602
chr1 42204201 42204210 PITX3 JASPAR yes 28415683
chr1 42204201 42204210 PITX3 JASPAR yes 118279603
chr1 42204202 42204210 RHOXF1 JASPAR yes 28415684
chr1 42204202 42204210 RHOXF1 JASPAR yes 118279604
chr1 42204205 42204225 RREB1 JASPAR yes 28415685
chr1 42204205 42204225 RREB1 JASPAR yes 118279605
chr1 42204210 42204224 GLIS3 JASPAR yes 28415686
chr1 42204210 42204224 GLIS3 JASPAR yes 118279606
chr1 42204213 42204229 ZNF143 JASPAR yes 28415687
chr1 42204213 42204229 ZNF143 JASPAR yes 118279607
chr1 42204218 42204224 SOX10 JASPAR yes 28415688
chr1 42204218 42204224 SOX10 JASPAR yes 118279608
chr1 42204229 42204235 GATA3 JASPAR yes 28415689
chr1 42204229 42204235 GATA3 JASPAR yes 118279609
chr1 42204248 42204258 SREBF1 JASPAR yes 28415690
chr1 42204248 42204258 SREBF2 JASPAR yes 28415691
chr1 42204248 42204258 TFEC JASPAR yes 28415692
chr1 42204248 42204258 SREBF1 JASPAR yes 118279610
chr1 42204248 42204258 SREBF2 JASPAR yes 118279611
chr1 42204248 42204258 TFEC JASPAR yes 118279612
chr1 42204248 42204259 USF1 JASPAR yes 28415693
chr1 42204248 42204259 USF2 JASPAR yes 28415694
chr1 42204248 42204259 USF1 JASPAR yes 118279613
chr1 42204248 42204259 USF2 JASPAR yes 118279614
chr1 42204262 42204279 RXRA JASPAR yes 28415695
chr1 42204262 42204279 RXRA JASPAR yes 118279615
chr1 42204267 42204283 ZNF143 JASPAR yes 28415696
chr1 42204267 42204283 ZNF143 JASPAR yes 118279616
chr1 42204279 42204289 SREBF1 JASPAR yes 28415697
chr1 42204279 42204289 SREBF2 JASPAR yes 28415698
chr1 42204279 42204289 SREBF1 JASPAR yes 118279617
chr1 42204279 42204289 SREBF2 JASPAR yes 118279618
chr1 42204317 42204332 RUNX2 JASPAR yes 28415699
chr1 42204317 42204332 RUNX2 JASPAR yes 118279619
chr1 42204320 42204326 SOX10 JASPAR yes 28415700
chr1 42204320 42204326 SOX10 JASPAR yes 118279620
chr1 42204321 42204331 RUNX3 JASPAR yes 28415701
chr1 42204321 42204331 RUNX3 JASPAR yes 118279621
chr1 42204321 42204336 RFX5 JASPAR yes 28415702
chr1 42204321 42204336 RFX5 JASPAR yes 118279622
chr1 42204325 42204340 ESR2 JASPAR yes 28415703
chr1 42204325 42204340 ESR2 JASPAR yes 118279623
chr1 42204325 42204345 ESR1 JASPAR yes 28415704
chr1 42204325 42204345 ESR1 JASPAR yes 118279624
chr1 42204326 42204330 ESR1 TRANSFAC yes 28415705
chr1 42204326 42204330 ESR1 TRANSFAC yes 118279625
SNP sites on vista1349[chr1:42204198-42204327]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 42204247 rs145080185 G A no 264205
chr1 42204270 rs116755774 C A
RXRA ZNF143
264206
Genes possibly regulated by vista1349[chr1:42204198-42204327]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista1349[chr1:42204198-42204327]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results