EnhancerDB
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  3. vista1354[chr1:42230841-42231100]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1354[chr1:42230841-42231100]
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Tissue distribution of vista1354
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Transcription factor that possibly regulate vista1354[chr1:42230841-42231100]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 42230837 42230852 AR JASPAR yes 28419413
chr1 42230837 42230852 AR JASPAR yes 118279904
chr1 42230844 42230859 HNF4A JASPAR yes 28419414
chr1 42230844 42230859 HNF4A JASPAR yes 118279905
chr1 42230845 42230860 HNF4G JASPAR yes 28419415
chr1 42230845 42230860 HNF4G JASPAR yes 118279906
chr1 42230855 42230867 POU2F1 JASPAR yes 28419416
chr1 42230855 42230867 POU2F1 JASPAR yes 118279907
chr1 42230855 42230868 POU3F3 JASPAR yes 28419417
chr1 42230855 42230868 POU3F3 JASPAR yes 118279908
chr1 42230855 42230869 POU1F1 JASPAR yes 28419418
chr1 42230855 42230869 POU1F1 JASPAR yes 118279909
chr1 42230856 42230868 POU3F1 JASPAR yes 28419419
chr1 42230856 42230868 POU3F2 JASPAR yes 28419420
chr1 42230856 42230868 POU3F1 JASPAR yes 118279910
chr1 42230856 42230868 POU3F2 JASPAR yes 118279911
chr1 42230857 42230861 YY1 TRANSFAC yes 28419421
chr1 42230857 42230861 YY1 TRANSFAC yes 118279912
chr1 42230857 42230868 PROP1 JASPAR yes 28419422
chr1 42230857 42230868 PROP1 JASPAR yes 118279913
chr1 42230860 42230870 ALX3 JASPAR yes 28419423
chr1 42230860 42230870 GSX1 JASPAR yes 28419424
chr1 42230860 42230870 GSX2 JASPAR yes 28419425
chr1 42230860 42230870 LHX6 JASPAR yes 28419426
chr1 42230860 42230870 MIXL1 JASPAR yes 28419427
chr1 42230860 42230870 MNX1 JASPAR yes 28419428
chr1 42230860 42230870 NOTO JASPAR yes 28419429
chr1 42230860 42230870 POU6F1 JASPAR yes 28419430
chr1 42230860 42230870 RAX JASPAR yes 28419431
chr1 42230860 42230870 ALX3 JASPAR yes 118279914
chr1 42230860 42230870 GSX1 JASPAR yes 118279915
chr1 42230860 42230870 GSX2 JASPAR yes 118279916
chr1 42230860 42230870 LHX6 JASPAR yes 118279917
chr1 42230860 42230870 MIXL1 JASPAR yes 118279918
chr1 42230860 42230870 MNX1 JASPAR yes 118279919
chr1 42230860 42230870 NOTO JASPAR yes 118279920
chr1 42230860 42230870 POU6F1 JASPAR yes 118279921
chr1 42230860 42230870 RAX JASPAR yes 118279922
chr1 42230860 42230875 HNF1A JASPAR yes 28419432
chr1 42230860 42230875 HNF1A JASPAR yes 118279923
chr1 42230861 42230869 ISX JASPAR yes 28419433
chr1 42230861 42230869 LMX1A JASPAR yes 28419434
chr1 42230861 42230869 LMX1B JASPAR yes 28419435
chr1 42230861 42230869 NKX6-1 JASPAR yes 28419436
chr1 42230861 42230869 NKX6-2 JASPAR yes 28419437
chr1 42230861 42230869 PRRX1 JASPAR yes 28419438
chr1 42230861 42230869 RAX2 JASPAR yes 28419439
chr1 42230861 42230869 SHOX JASPAR yes 28419440
chr1 42230861 42230869 UNCX JASPAR yes 28419441
chr1 42230861 42230869 VAX1 JASPAR yes 28419442
chr1 42230861 42230869 ISX JASPAR yes 118279924
chr1 42230861 42230869 LMX1A JASPAR yes 118279925
chr1 42230861 42230869 LMX1B JASPAR yes 118279926
chr1 42230861 42230869 NKX6-1 JASPAR yes 118279927
chr1 42230861 42230869 NKX6-2 JASPAR yes 118279928
chr1 42230861 42230869 PRRX1 JASPAR yes 118279929
chr1 42230861 42230869 RAX2 JASPAR yes 118279930
chr1 42230861 42230869 SHOX JASPAR yes 118279931
chr1 42230861 42230869 UNCX JASPAR yes 118279932
chr1 42230861 42230869 VAX1 JASPAR yes 118279933
chr1 42230861 42230872 PHOX2A JASPAR yes 28419443
chr1 42230861 42230872 PROP1 JASPAR yes 28419444
chr1 42230861 42230872 PHOX2A JASPAR yes 118279934
chr1 42230861 42230872 PROP1 JASPAR yes 118279935
chr1 42230861 42230874 HNF1B JASPAR yes 28419445
chr1 42230861 42230874 HNF1B JASPAR yes 118279936
chr1 42230861 42230875 POU4F1 JASPAR yes 28419446
chr1 42230861 42230875 POU4F1 JASPAR yes 118279937
chr1 42230862 42230872 PAX3 JASPAR yes 28419447
chr1 42230862 42230872 PAX7 JASPAR yes 28419448
chr1 42230862 42230872 PAX3 JASPAR yes 118279938
chr1 42230862 42230872 PAX7 JASPAR yes 118279939
chr1 42230862 42230873 PHOX2A JASPAR yes 28419449
chr1 42230862 42230873 PROP1 JASPAR yes 28419450
chr1 42230862 42230873 PHOX2A JASPAR yes 118279940
chr1 42230862 42230873 PROP1 JASPAR yes 118279941
chr1 42230864 42230874 EMX1 JASPAR yes 28419451
chr1 42230864 42230874 EMX2 JASPAR yes 28419452
chr1 42230864 42230874 ESX1 JASPAR yes 28419453
chr1 42230864 42230874 GSX1 JASPAR yes 28419454
chr1 42230864 42230874 GSX2 JASPAR yes 28419455
chr1 42230864 42230874 HESX1 JASPAR yes 28419456
chr1 42230864 42230874 HOXB2 JASPAR yes 28419457
chr1 42230864 42230874 HOXB3 JASPAR yes 28419458
chr1 42230864 42230874 LBX2 JASPAR yes 28419459
chr1 42230864 42230874 LHX2 JASPAR yes 28419460
chr1 42230864 42230874 LHX6 JASPAR yes 28419461
chr1 42230864 42230874 MIXL1 JASPAR yes 28419462
chr1 42230864 42230874 MNX1 JASPAR yes 28419463
chr1 42230864 42230874 NOTO JASPAR yes 28419464
chr1 42230864 42230874 POU6F1 JASPAR yes 28419465
chr1 42230864 42230874 RAX JASPAR yes 28419466
chr1 42230864 42230874 EMX1 JASPAR yes 118279942
chr1 42230864 42230874 EMX2 JASPAR yes 118279943
chr1 42230864 42230874 ESX1 JASPAR yes 118279944
chr1 42230864 42230874 GSX1 JASPAR yes 118279945
chr1 42230864 42230874 GSX2 JASPAR yes 118279946
chr1 42230864 42230874 HESX1 JASPAR yes 118279947
chr1 42230864 42230874 HOXB2 JASPAR yes 118279948
chr1 42230864 42230874 HOXB3 JASPAR yes 118279949
chr1 42230864 42230874 LBX2 JASPAR yes 118279950
chr1 42230864 42230874 LHX2 JASPAR yes 118279951
chr1 42230864 42230874 LHX6 JASPAR yes 118279952
chr1 42230864 42230874 MIXL1 JASPAR yes 118279953
chr1 42230864 42230874 MNX1 JASPAR yes 118279954
chr1 42230864 42230874 NOTO JASPAR yes 118279955
chr1 42230864 42230874 POU6F1 JASPAR yes 118279956
chr1 42230864 42230874 RAX JASPAR yes 118279957
chr1 42230865 42230873 ISX JASPAR yes 28419467
chr1 42230865 42230873 LMX1A JASPAR yes 28419468
chr1 42230865 42230873 LMX1B JASPAR yes 28419469
chr1 42230865 42230873 NKX6-1 JASPAR yes 28419470
chr1 42230865 42230873 NKX6-2 JASPAR yes 28419471
chr1 42230865 42230873 PRRX1 JASPAR yes 28419472
chr1 42230865 42230873 RAX2 JASPAR yes 28419473
chr1 42230865 42230873 SHOX JASPAR yes 28419474
chr1 42230865 42230873 UNCX JASPAR yes 28419475
chr1 42230865 42230873 VAX1 JASPAR yes 28419476
chr1 42230865 42230873 ISX JASPAR yes 118279958
chr1 42230865 42230873 LMX1A JASPAR yes 118279959
chr1 42230865 42230873 LMX1B JASPAR yes 118279960
chr1 42230865 42230873 NKX6-1 JASPAR yes 118279961
chr1 42230865 42230873 NKX6-2 JASPAR yes 118279962
chr1 42230865 42230873 PRRX1 JASPAR yes 118279963
chr1 42230865 42230873 RAX2 JASPAR yes 118279964
chr1 42230865 42230873 SHOX JASPAR yes 118279965
chr1 42230865 42230873 UNCX JASPAR yes 118279966
chr1 42230865 42230873 VAX1 JASPAR yes 118279967
chr1 42230865 42230879 POU1F1 JASPAR yes 28419477
chr1 42230865 42230879 POU1F1 JASPAR yes 118279968
chr1 42230870 42230873 MYB TRANSFAC yes 28419478
chr1 42230870 42230873 MYB TRANSFAC yes 118279969
chr1 42230875 42230886 E2F6 JASPAR yes 28419479
chr1 42230875 42230886 E2F6 JASPAR yes 118279970
chr1 42230896 42230917 IRF1 JASPAR yes 28419480
chr1 42230896 42230917 IRF1 JASPAR yes 118279971
chr1 42230902 42230907 ETS2 TRANSFAC yes 28419481
chr1 42230902 42230907 ETS2 TRANSFAC yes 118279972
chr1 42230913 42230924 ELF5 JASPAR yes 28419482
chr1 42230913 42230924 ELF5 JASPAR yes 118279973
chr1 42230913 42230926 ELF1 JASPAR yes 28419483
chr1 42230913 42230926 ELF1 JASPAR yes 118279974
chr1 42230913 42230927 SPI1 JASPAR yes 28419484
chr1 42230913 42230927 SPIC JASPAR yes 28419485
chr1 42230913 42230927 SPI1 JASPAR yes 118279975
chr1 42230913 42230927 SPIC JASPAR yes 118279976
chr1 42230914 42230921 SPI1 JASPAR yes 28419486
chr1 42230914 42230921 SPI1 JASPAR yes 118279977
chr1 42230914 42230922 EHF JASPAR yes 28419487
chr1 42230914 42230922 EHF JASPAR yes 118279978
chr1 42230925 42230931 MZF1 JASPAR yes 28419488
chr1 42230925 42230931 MZF1 JASPAR yes 118279979
chr1 42230929 42230944 MEF2A JASPAR yes 28419489
chr1 42230929 42230944 MEF2A JASPAR yes 118279980
chr1 42230930 42230945 MEF2C JASPAR yes 28419490
chr1 42230930 42230945 MEF2C JASPAR yes 118279981
chr1 42230931 42230943 MEF2A JASPAR yes 28419491
chr1 42230931 42230943 MEF2B JASPAR yes 28419492
chr1 42230931 42230943 MEF2D JASPAR yes 28419493
chr1 42230931 42230943 MEF2A JASPAR yes 118279982
chr1 42230931 42230943 MEF2B JASPAR yes 118279983
chr1 42230931 42230943 MEF2D JASPAR yes 118279984
chr1 42230932 42230942 MEF2A JASPAR yes 28419494
chr1 42230932 42230942 MEF2A JASPAR yes 118279985
chr1 42230933 42230937 YY1 TRANSFAC yes 28419495
chr1 42230933 42230937 YY1 TRANSFAC yes 118279986
chr1 42230937 42230941 TEAD2 TRANSFAC yes 28419496
chr1 42230937 42230941 TEAD2 TRANSFAC yes 118279987
chr1 42230937 42230942 TBP TRANSFAC yes 28419497
chr1 42230937 42230942 TBP TRANSFAC yes 118279988
chr1 42230953 42230960 E2F1 TRANSFAC yes 28419498
chr1 42230953 42230960 E2F1 TRANSFAC yes 118279989
chr1 42230961 42230976 LEF1 JASPAR yes 28419499
chr1 42230961 42230976 LEF1 JASPAR yes 118279990
chr1 42230965 42230971 LEF1 TRANSFAC yes 28419500
chr1 42230965 42230971 SOX10 JASPAR yes 28419501
chr1 42230965 42230971 LEF1 TRANSFAC yes 118279991
chr1 42230965 42230971 SOX10 JASPAR yes 118279992
chr1 42230970 42230975 ETS2 TRANSFAC yes 28419502
chr1 42230970 42230975 ETS2 TRANSFAC yes 118279993
chr1 42231006 42231017 EBF1 JASPAR yes 28419503
chr1 42231006 42231017 EBF1 JASPAR yes 118279994
chr1 42231007 42231013 MZF1 JASPAR yes 28419504
chr1 42231007 42231013 MZF1 JASPAR yes 118279995
chr1 42231013 42231024 E2F6 JASPAR yes 28419505
chr1 42231013 42231024 E2F6 JASPAR yes 118279996
chr1 42231016 42231029 NFKB1 JASPAR yes 28419506
chr1 42231016 42231029 NFKB1 JASPAR yes 118279997
chr1 42231017 42231027 NFKB1 JASPAR yes 28419507
chr1 42231017 42231027 NFKB1 JASPAR yes 118279998
chr1 42231017 42231028 NFKB1 JASPAR yes 28419508
chr1 42231017 42231028 NFKB1 JASPAR yes 118279999
chr1 42231021 42231025 H4TF2 TRANSFAC yes 28419509
chr1 42231021 42231025 H4TF2 TRANSFAC yes 118280000
chr1 42231023 42231029 MZF1 JASPAR yes 28419510
chr1 42231023 42231029 MZF1 JASPAR yes 118280001
chr1 42231027 42231031 YY1 TRANSFAC yes 28419511
chr1 42231027 42231031 YY1 TRANSFAC yes 118280002
chr1 42231058 42231061 MYB TRANSFAC yes 28419512
chr1 42231058 42231061 MYB TRANSFAC yes 118280003
chr1 42231058 42231075 RARA JASPAR yes 28419513
chr1 42231058 42231075 RARA JASPAR yes 118280004
chr1 42231078 42231088 NFIA JASPAR yes 28419514
chr1 42231078 42231088 NFIA JASPAR yes 118280005
chr1 42231080 42231086 NFIC JASPAR yes 28419515
chr1 42231080 42231086 NFIC JASPAR yes 118280006
SNP sites on vista1354[chr1:42230841-42231100]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 42231046 rs543912870 G A,C no 264557
chr1 42231051 rs6679227 A G no 264558
Genes possibly regulated by vista1354[chr1:42230841-42231100]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista1354[chr1:42230841-42231100]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results