EnhancerDB
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  3. vista13575[chr12:54752421-54752649]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13575[chr12:54752421-54752649]
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Tissue distribution of vista13575
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Transcription factor that possibly regulate vista13575[chr12:54752421-54752649]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 54751779 54752523 POLR2A UCSC Txn Factor no Conserved 108037447
chr12 54752416 54752421 GATA2 JASPAR yes 82412201
chr12 54752416 54752421 GATA2 JASPAR yes 121036695
chr12 54752429 54752440 NFKB1 JASPAR yes 82412202
chr12 54752429 54752440 NFKB1 JASPAR yes 121036696
chr12 54752430 54752440 NFKB1 JASPAR yes 82412203
chr12 54752430 54752440 REL JASPAR yes 82412204
chr12 54752430 54752440 NFKB1 JASPAR yes 121036697
chr12 54752430 54752440 REL JASPAR yes 121036698
chr12 54752453 54752458 H4TF1 TRANSFAC yes 82412205
chr12 54752453 54752458 H4TF1 TRANSFAC yes 121036699
chr12 54752489 54752510 ZNF263 JASPAR yes 82412206
chr12 54752489 54752510 ZNF263 JASPAR yes 121036700
chr12 54752490 54752505 PRDM1 JASPAR yes 82412207
chr12 54752490 54752505 PRDM1 JASPAR yes 121036701
chr12 54752493 54752514 ZNF263 JASPAR yes 82412208
chr12 54752493 54752514 ZNF263 JASPAR yes 121036702
chr12 54752496 54752517 ZNF263 JASPAR yes 82412209
chr12 54752496 54752517 ZNF263 JASPAR yes 121036703
chr12 54752497 54752518 ZNF263 JASPAR yes 82412210
chr12 54752497 54752518 ZNF263 JASPAR yes 121036704
chr12 54752500 54752521 ZNF263 JASPAR yes 82412211
chr12 54752500 54752521 ZNF263 JASPAR yes 121036705
chr12 54752536 54752546 CEBPB JASPAR yes 82412212
chr12 54752536 54752546 CEBPE JASPAR yes 82412213
chr12 54752536 54752546 CEBPG JASPAR yes 82412214
chr12 54752536 54752546 CEBPB JASPAR yes 121036706
chr12 54752536 54752546 CEBPE JASPAR yes 121036707
chr12 54752536 54752546 CEBPG JASPAR yes 121036708
chr12 54752539 54752549 SP1 JASPAR yes 82412215
chr12 54752539 54752549 SP1 JASPAR yes 121036709
chr12 54752543 54752553 ZNF740 JASPAR yes 82412216
chr12 54752543 54752553 ZNF740 JASPAR yes 121036710
chr12 54752543 54752557 GLIS2 JASPAR yes 82412217
chr12 54752543 54752557 GLIS3 JASPAR yes 82412218
chr12 54752543 54752557 GLIS2 JASPAR yes 121036711
chr12 54752543 54752557 GLIS3 JASPAR yes 121036712
chr12 54752547 54752561 PLAG1 JASPAR yes 82412219
chr12 54752547 54752561 PLAG1 JASPAR yes 121036713
chr12 54752550 54752554 YY1 TRANSFAC yes 82412220
chr12 54752550 54752554 YY1 TRANSFAC yes 121036714
chr12 54752559 54752580 ZNF263 JASPAR yes 82412221
chr12 54752559 54752580 ZNF263 JASPAR yes 121036715
chr12 54752561 54752582 ZNF263 JASPAR yes 82412222
chr12 54752561 54752582 ZNF263 JASPAR yes 121036716
chr12 54752562 54752565 MYB TRANSFAC yes 82412223
chr12 54752562 54752565 MYB TRANSFAC yes 121036717
chr12 54752562 54752583 ZNF263 JASPAR yes 82412224
chr12 54752562 54752583 ZNF263 JASPAR yes 121036718
chr12 54752567 54752588 ZNF263 JASPAR yes 82412225
chr12 54752567 54752588 ZNF263 JASPAR yes 121036719
chr12 54752568 54752589 ZNF263 JASPAR yes 82412226
chr12 54752568 54752589 ZNF263 JASPAR yes 121036720
chr12 54752571 54752592 ZNF263 JASPAR yes 82412227
chr12 54752571 54752592 ZNF263 JASPAR yes 121036721
chr12 54752572 54752593 ZNF263 JASPAR yes 82412228
chr12 54752572 54752593 ZNF263 JASPAR yes 121036722
chr12 54752575 54752596 ZNF263 JASPAR yes 82412229
chr12 54752575 54752596 ZNF263 JASPAR yes 121036723
chr12 54752576 54752597 ZNF263 JASPAR yes 82412230
chr12 54752576 54752597 ZNF263 JASPAR yes 121036724
chr12 54752583 54752604 ZNF263 JASPAR yes 82412231
chr12 54752583 54752604 ZNF263 JASPAR yes 121036725
chr12 54752584 54752592 EHF JASPAR yes 82412232
chr12 54752584 54752592 EHF JASPAR yes 121036726
chr12 54752586 54752591 ETS2 TRANSFAC yes 82412233
chr12 54752586 54752591 ETS2 TRANSFAC yes 121036727
chr12 54752586 54752607 ZNF263 JASPAR yes 82412234
chr12 54752586 54752607 ZNF263 JASPAR yes 121036728
chr12 54752590 54752611 ZNF263 JASPAR yes 82412235
chr12 54752590 54752611 ZNF263 JASPAR yes 121036729
chr12 54752595 54752616 ZNF263 JASPAR yes 82412236
chr12 54752595 54752616 ZNF263 JASPAR yes 121036730
chr12 54752602 54752610 EHF JASPAR yes 82412237
chr12 54752602 54752610 EHF JASPAR yes 121036731
chr12 54752603 54752624 ZNF263 JASPAR yes 82412238
chr12 54752603 54752624 ZNF263 JASPAR yes 121036732
chr12 54752604 54752609 ETS2 TRANSFAC yes 82412239
chr12 54752604 54752609 ETS2 TRANSFAC yes 121036733
chr12 54752606 54752627 ZNF263 JASPAR yes 82412240
chr12 54752606 54752627 ZNF263 JASPAR yes 121036734
chr12 54752615 54752619 NFE TRANSFAC yes 82412241
chr12 54752615 54752619 NFE TRANSFAC yes 121036735
chr12 54752626 54752647 IRF1 JASPAR yes 82412242
chr12 54752626 54752647 IRF1 JASPAR yes 121036736
chr12 54752634 54752649 PRDM1 JASPAR yes 82412243
chr12 54752634 54752649 STAT2 JASPAR yes 82412244
chr12 54752634 54752649 PRDM1 JASPAR yes 121036737
chr12 54752634 54752649 STAT2 JASPAR yes 121036738
chr12 54752635 54752649 STAT1 JASPAR yes 82412245
chr12 54752635 54752649 STAT1 JASPAR yes 121036739
SNP sites on vista13575[chr12:54752421-54752649]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 54752480 rs115459891 C T
POLR2A
2651945
chr12 54752537 rs149193372 A T
CEBPB CEBPE CEBPG
2651946
chr12 54752545 rs538187487 A AC
CEBPB CEBPE CEBPG GLIS2 GLIS3 SP1 ZNF740
2651947
chr12 54752553 rs2007755 T C
GLIS2 GLIS3 PLAG1 YY1 ZNF740
2651948
chr12 54752572 rs144917615 C CT
ZNF263
2651949
chr12 54752585 rs533118293 C A
EHF ZNF263
2651950
chr12 54752602 rs1881931 A C,G
EHF ZNF263
2651951
Genes possibly regulated by vista13575[chr12:54752421-54752649]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 54624724 54673886 - CBX5 ENSG00000094916.9 54673886 0.79 0.98 12145 21465
chr12 54673977 54680872 + HNRNPA1 ENSG00000135486.13 54673977 0.83 0.98 12146 21556
chr12 54685895 54694905 - NFE2 ENSG00000123405.9 54694905 0.97 0.95 12147 42484
chr12 54694986 54745633 + COPZ1 ENSG00000111481.5 54694986 0.64 1.0 12148 42565
chr12 54756229 54758271 - GPR84 ENSG00000139572.3 54758271 0.88 1.0 12149 94378
chr12 54762917 54785082 - ZNF385A ENSG00000161642.13 54785082 0.83 1.0 12150 67567
chr12 54789045 54813244 - ITGA5 ENSG00000161638.6 54813244 0.79 1.0 12151 39405
Expression level of Genes
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miRNAs possibly regulated by vista13575[chr12:54752421-54752649]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results