EnhancerDB
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  3. vista13578[chr12:54770417-54770796]
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13578[chr12:54770417-54770796]
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Tissue distribution of vista13578
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Transcription factor that possibly regulate vista13578[chr12:54770417-54770796]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 54770451 54770455 LFA1 TRANSFAC yes 82412527
chr12 54770451 54770455 LFA1 TRANSFAC yes 121038353
chr12 54770469 54770474 SP1 TRANSFAC yes 82412528
chr12 54770469 54770474 SP1 TRANSFAC yes 121038354
chr12 54770470 54770475 SP1 TRANSFAC yes 82412529
chr12 54770470 54770475 SP1 TRANSFAC yes 121038355
chr12 54770472 54770482 GSC2 JASPAR yes 82412530
chr12 54770472 54770482 GSC JASPAR yes 82412531
chr12 54770472 54770482 GSC2 JASPAR yes 121038356
chr12 54770472 54770482 GSC JASPAR yes 121038357
chr12 54770473 54770481 OTX1 JASPAR yes 82412532
chr12 54770473 54770481 OTX1 JASPAR yes 121038358
chr12 54770473 54770482 PITX3 JASPAR yes 82412533
chr12 54770473 54770482 PITX3 JASPAR yes 121038359
chr12 54770488 54770498 SP1 JASPAR yes 82412534
chr12 54770488 54770498 SP1 JASPAR yes 121038360
chr12 54770490 54770494 NFE TRANSFAC yes 82412535
chr12 54770490 54770494 NFE TRANSFAC yes 121038361
chr12 54770493 54770499 MZF1 JASPAR yes 82412536
chr12 54770493 54770499 MZF1 JASPAR yes 121038362
chr12 54770500 54770518 MAFF JASPAR yes 82412537
chr12 54770500 54770518 MAFF JASPAR yes 121038363
chr12 54770501 54770516 MAFK JASPAR yes 82412538
chr12 54770501 54770516 MAFK JASPAR yes 121038364
chr12 54770502 54770508 ESR1 TRANSFAC yes 82412539
chr12 54770502 54770508 ESR1 TRANSFAC yes 121038365
chr12 54770504 54770508 ESR1 TRANSFAC yes 82412540
chr12 54770504 54770508 ESR1 TRANSFAC yes 121038366
chr12 54770505 54770516 NRL JASPAR yes 82412541
chr12 54770505 54770516 NRL JASPAR yes 121038367
chr12 54770509 54770521 PROX1 JASPAR yes 82412542
chr12 54770509 54770521 PROX1 JASPAR yes 121038368
chr12 54770530 54770536 NFIC JASPAR yes 82412543
chr12 54770530 54770536 NFIC JASPAR yes 121038369
chr12 54770545 54770551 JUN TRANSFAC yes 82412544
chr12 54770545 54770551 JUN TRANSFAC yes 121038370
chr12 54770547 54770562 PRDM1 JASPAR yes 82412545
chr12 54770547 54770562 PRDM1 JASPAR yes 121038371
chr12 54770562 54770573 NFKB1 JASPAR yes 82412546
chr12 54770562 54770573 NFKB1 JASPAR yes 121038372
chr12 54770585 54770589 NFE TRANSFAC yes 82412547
chr12 54770585 54770589 NFE TRANSFAC yes 121038373
chr12 54770605 54770619 PLAG1 JASPAR yes 82412548
chr12 54770605 54770619 PLAG1 JASPAR yes 121038374
chr12 54770613 54770623 TBX21 JASPAR yes 82412549
chr12 54770613 54770623 TBX21 JASPAR yes 121038375
chr12 54770613 54770624 TBX20 JASPAR yes 82412550
chr12 54770613 54770624 TBX2 JASPAR yes 82412551
chr12 54770613 54770624 TBX20 JASPAR yes 121038376
chr12 54770613 54770624 TBX2 JASPAR yes 121038377
chr12 54770613 54770626 EOMES JASPAR yes 82412552
chr12 54770613 54770626 EOMES JASPAR yes 121038378
chr12 54770614 54770622 MGA JASPAR yes 82412553
chr12 54770614 54770622 TBX15 JASPAR yes 82412554
chr12 54770614 54770622 TBX1 JASPAR yes 82412555
chr12 54770614 54770622 TBX4 JASPAR yes 82412556
chr12 54770614 54770622 TBX5 JASPAR yes 82412557
chr12 54770614 54770622 MGA JASPAR yes 121038379
chr12 54770614 54770622 TBX15 JASPAR yes 121038380
chr12 54770614 54770622 TBX1 JASPAR yes 121038381
chr12 54770614 54770622 TBX4 JASPAR yes 121038382
chr12 54770614 54770622 TBX5 JASPAR yes 121038383
chr12 54770614 54770624 TBR1 JASPAR yes 82412558
chr12 54770614 54770624 TBR1 JASPAR yes 121038384
chr12 54770629 54770650 ZNF263 JASPAR yes 82412559
chr12 54770629 54770650 ZNF263 JASPAR yes 121038385
chr12 54770641 54770662 ZNF263 JASPAR yes 82412560
chr12 54770641 54770662 ZNF263 JASPAR yes 121038386
chr12 54770647 54770661 PLAG1 JASPAR yes 82412561
chr12 54770647 54770661 PLAG1 JASPAR yes 121038387
chr12 54770653 54770667 TLX1 JASPAR yes 82412562
chr12 54770653 54770667 TLX1 JASPAR yes 121038388
chr12 54770674 54770681 SPIB JASPAR yes 82412563
chr12 54770674 54770681 SPIB JASPAR yes 121038389
chr12 54770677 54770694 BCL6B JASPAR yes 82412564
chr12 54770677 54770694 BCL6B JASPAR yes 121038390
chr12 54770682 54770694 TEAD1 JASPAR yes 82412565
chr12 54770682 54770694 TEAD1 JASPAR yes 121038391
chr12 54770684 54770694 TEAD1 JASPAR yes 82412566
chr12 54770684 54770694 TEAD4 JASPAR yes 82412567
chr12 54770684 54770694 TEAD1 JASPAR yes 121038392
chr12 54770684 54770694 TEAD4 JASPAR yes 121038393
chr12 54770685 54770693 TEAD3 JASPAR yes 82412568
chr12 54770685 54770693 TEAD3 JASPAR yes 121038394
chr12 54770689 54770701 NHLH1 JASPAR yes 82412569
chr12 54770689 54770701 NHLH1 JASPAR yes 121038395
chr12 54770703 54770720 ZNF410 JASPAR yes 82412570
chr12 54770703 54770720 ZNF410 JASPAR yes 121038396
chr12 54770706 54770711 NFY TRANSFAC yes 82412571
chr12 54770706 54770711 NFY TRANSFAC yes 121038397
chr12 54770714 54770720 YY1 JASPAR yes 82412572
chr12 54770714 54770720 YY1 JASPAR yes 121038398
chr12 54770755 54770769 GATA2 JASPAR yes 82412573
chr12 54770755 54770769 GATA2 JASPAR yes 121038399
chr12 54770759 54770767 GATA3 JASPAR yes 82412574
chr12 54770759 54770767 GATA5 JASPAR yes 82412575
chr12 54770759 54770767 GATA3 JASPAR yes 121038400
chr12 54770759 54770767 GATA5 JASPAR yes 121038401
chr12 54770771 54770792 ZNF263 JASPAR yes 82412576
chr12 54770771 54770792 ZNF263 JASPAR yes 121038402
chr12 54770777 54770785 RHOXF1 JASPAR yes 82412577
chr12 54770777 54770785 RHOXF1 JASPAR yes 121038403
chr12 54770792 54770807 RFX5 JASPAR yes 82412578
chr12 54770792 54770807 RFX5 JASPAR yes 121038404
SNP sites on vista13578[chr12:54770417-54770796]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 54770475 rs145372604 G A
GSC GSC2 OTX1 PITX3 SP1
2652096
Genes possibly regulated by vista13578[chr12:54770417-54770796]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 54624724 54673886 - CBX5 ENSG00000094916.9 54673886 0.79 0.98 12145 3469
chr12 54673977 54680872 + HNRNPA1 ENSG00000135486.13 54673977 0.83 0.98 12146 3560
chr12 54685895 54694905 - NFE2 ENSG00000123405.9 54694905 0.97 0.95 12147 24488
chr12 54694986 54745633 + COPZ1 ENSG00000111481.5 54694986 0.64 1.0 12148 24569
chr12 54756229 54758271 - GPR84 ENSG00000139572.3 54758271 0.88 1.0 12149 87854
chr12 54762917 54785082 - ZNF385A ENSG00000161642.13 54785082 0.83 1.0 12150 85714
chr12 54789045 54813244 - ITGA5 ENSG00000161638.6 54813244 0.79 1.0 12151 57552
chr12 54849734 54867386 - GTSF1 ENSG00000170627.5 54867386 1.0 1.0 12152 3410
Expression level of Genes
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miRNAs possibly regulated by vista13578[chr12:54770417-54770796]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results