EnhancerDB
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  3. vista13594[chr12:55350184-55350446]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13594[chr12:55350184-55350446]
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Tissue distribution of vista13594
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Transcription factor that possibly regulate vista13594[chr12:55350184-55350446]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 55350165 55350186 IRF1 JASPAR yes 82413379
chr12 55350165 55350186 IRF1 JASPAR yes 121062457
chr12 55350189 55350201 IRF1 JASPAR yes 82413380
chr12 55350189 55350201 IRF1 JASPAR yes 121062459
chr12 55350189 55350204 STAT2 JASPAR yes 82413381
chr12 55350189 55350204 STAT2 JASPAR yes 121062460
chr12 55350197 55350212 PRDM1 JASPAR yes 82413382
chr12 55350197 55350212 PRDM1 JASPAR yes 121062461
chr12 55350222 55350226 TEAD2 TRANSFAC yes 82413383
chr12 55350222 55350226 TEAD2 TRANSFAC yes 121062462
chr12 55350224 55350234 TBX21 JASPAR yes 82413384
chr12 55350224 55350234 TBX21 JASPAR yes 121062463
chr12 55350224 55350235 TBX20 JASPAR yes 82413385
chr12 55350224 55350235 TBX2 JASPAR yes 82413386
chr12 55350224 55350235 TBX20 JASPAR yes 121062464
chr12 55350224 55350235 TBX2 JASPAR yes 121062465
chr12 55350224 55350237 EOMES JASPAR yes 82413387
chr12 55350224 55350237 EOMES JASPAR yes 121062466
chr12 55350225 55350233 MGA JASPAR yes 82413388
chr12 55350225 55350233 TBX15 JASPAR yes 82413389
chr12 55350225 55350233 TBX1 JASPAR yes 82413390
chr12 55350225 55350233 TBX4 JASPAR yes 82413391
chr12 55350225 55350233 TBX5 JASPAR yes 82413392
chr12 55350225 55350233 MGA JASPAR yes 121062467
chr12 55350225 55350233 TBX15 JASPAR yes 121062468
chr12 55350225 55350233 TBX1 JASPAR yes 121062469
chr12 55350225 55350233 TBX4 JASPAR yes 121062470
chr12 55350225 55350233 TBX5 JASPAR yes 121062471
chr12 55350225 55350235 TBR1 JASPAR yes 82413393
chr12 55350225 55350235 TBR1 JASPAR yes 121062472
chr12 55350232 55350242 RORA JASPAR yes 82413394
chr12 55350232 55350242 RORA JASPAR yes 121062473
chr12 55350233 55350244 ESRRA JASPAR yes 82413395
chr12 55350233 55350244 ESRRB JASPAR yes 82413396
chr12 55350233 55350244 ESRRA JASPAR yes 121062474
chr12 55350233 55350244 ESRRB JASPAR yes 121062475
chr12 55350233 55350246 NR2F1 JASPAR yes 82413397
chr12 55350233 55350246 NR2F1 JASPAR yes 121062476
chr12 55350235 55350243 NR4A2 JASPAR yes 82413398
chr12 55350235 55350243 NR4A2 JASPAR yes 121062477
chr12 55350237 55350241 ESR1 TRANSFAC yes 82413399
chr12 55350237 55350241 ESR1 TRANSFAC yes 121062478
chr12 55350238 55350247 NKX2-8 JASPAR yes 82413400
chr12 55350238 55350247 NKX2-8 JASPAR yes 121062479
chr12 55350238 55350248 NKX2-3 JASPAR yes 82413401
chr12 55350238 55350248 NKX2-3 JASPAR yes 121062480
chr12 55350244 55350258 RXRB JASPAR yes 82413402
chr12 55350244 55350258 RXRG JASPAR yes 82413403
chr12 55350244 55350258 RXRB JASPAR yes 121062481
chr12 55350244 55350258 RXRG JASPAR yes 121062482
chr12 55350250 55350261 FOXA1 JASPAR yes 82413404
chr12 55350250 55350261 FOXA1 JASPAR yes 121062483
chr12 55350250 55350265 FOXA1 JASPAR yes 82413405
chr12 55350250 55350265 FOXA1 JASPAR yes 121062484
chr12 55350251 55350262 FOXB1 JASPAR yes 82413406
chr12 55350251 55350262 FOXC1 JASPAR yes 82413407
chr12 55350251 55350262 FOXB1 JASPAR yes 121062485
chr12 55350251 55350262 FOXC1 JASPAR yes 121062486
chr12 55350251 55350263 FOXC2 JASPAR yes 82413408
chr12 55350251 55350263 FOXC2 JASPAR yes 121062487
chr12 55350262 55350276 ONECUT3 JASPAR yes 82413409
chr12 55350262 55350276 ONECUT3 JASPAR yes 121062488
chr12 55350268 55350272 H1TF2 TRANSFAC yes 82413410
chr12 55350268 55350272 NFE TRANSFAC yes 82413411
chr12 55350268 55350272 SRF TRANSFAC yes 82413412
chr12 55350268 55350272 H1TF2 TRANSFAC yes 121062489
chr12 55350268 55350272 NFE TRANSFAC yes 121062490
chr12 55350268 55350272 SRF TRANSFAC yes 121062491
chr12 55350268 55350274 NFYC TRANSFAC yes 82413413
chr12 55350268 55350274 NFYC TRANSFAC yes 121062492
chr12 55350293 55350297 YY1 TRANSFAC yes 82413414
chr12 55350293 55350297 YY1 TRANSFAC yes 121062493
chr12 55350298 55350314 ZNF143 JASPAR yes 82413415
chr12 55350298 55350314 ZNF143 JASPAR yes 121062494
chr12 55350323 55350337 RORA JASPAR yes 82413416
chr12 55350323 55350337 RORA JASPAR yes 121062495
chr12 55350326 55350336 RORA JASPAR yes 82413417
chr12 55350326 55350336 RORA JASPAR yes 121062496
chr12 55350328 55350348 PPARG JASPAR yes 82413418
chr12 55350328 55350348 PPARG JASPAR yes 121062497
chr12 55350329 55350335 ESR1 TRANSFAC yes 82413419
chr12 55350329 55350335 ESR1 TRANSFAC yes 121062498
chr12 55350331 55350335 ESR1 TRANSFAC yes 82413420
chr12 55350331 55350335 ESR1 TRANSFAC yes 121062499
chr12 55350353 55350359 PEA3 TRANSFAC yes 82413421
chr12 55350353 55350359 PEA3 TRANSFAC yes 121062500
chr12 55350372 55350383 STAT1 JASPAR yes 82413422
chr12 55350372 55350383 STAT3 JASPAR yes 82413423
chr12 55350372 55350383 STAT1 JASPAR yes 121062501
chr12 55350372 55350383 STAT3 JASPAR yes 121062502
chr12 55350394 55350415 ZNF263 JASPAR yes 82413424
chr12 55350394 55350415 ZNF263 JASPAR yes 121062503
chr12 55350410 55350420 MSC JASPAR yes 82413425
chr12 55350410 55350420 MSC JASPAR yes 121062504
chr12 55350418 55350432 TLX1 JASPAR yes 82413426
chr12 55350418 55350432 TLX1 JASPAR yes 121062505
chr12 55350419 55350433 TLX1 JASPAR yes 82413427
chr12 55350419 55350433 TLX1 JASPAR yes 121062506
chr12 55350424 55350439 HNF4G JASPAR yes 82413428
chr12 55350424 55350439 HNF4G JASPAR yes 121062507
chr12 55350424 55350442 ESR2 JASPAR yes 82413429
chr12 55350424 55350442 ESR2 JASPAR yes 121062508
chr12 55350425 55350440 HNF4A JASPAR yes 82413430
chr12 55350425 55350440 HNF4A JASPAR yes 121062509
chr12 55350427 55350431 ESR1 TRANSFAC yes 82413431
chr12 55350427 55350431 ESR1 TRANSFAC yes 121062510
chr12 55350431 55350445 SPI1 JASPAR yes 82413432
chr12 55350431 55350445 SPI1 JASPAR yes 121062511
chr12 55350433 55350437 H4TF2 TRANSFAC yes 82413433
chr12 55350433 55350437 H4TF2 TRANSFAC yes 121062512
chr12 55350438 55350450 MEF2A JASPAR yes 82413434
chr12 55350438 55350450 MEF2B JASPAR yes 82413435
chr12 55350438 55350450 MEF2D JASPAR yes 82413436
chr12 55350438 55350450 MEF2A JASPAR yes 121062513
chr12 55350438 55350450 MEF2B JASPAR yes 121062514
chr12 55350438 55350450 MEF2D JASPAR yes 121062515
chr12 55350439 55350449 MEF2A JASPAR yes 82413437
chr12 55350439 55350449 MEF2A JASPAR yes 121062516
SNP sites on vista13594[chr12:55350184-55350446]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 55350224 rs74092410 A G,T
EOMES TBX2 TBX20 TBX21 TEAD2
2654618
chr12 55350426 rs11829907 C G,T
ESR2 HNF4A HNF4G TLX1
2654619
chr12 55350431 rs150593595 CA C
ESR1 ESR2 HNF4A HNF4G SPI1 TLX1
2654620
chr12 55350435 rs34614777 G T
ESR2 H4TF2 HNF4A HNF4G SPI1
2654621
Genes possibly regulated by vista13594[chr12:55350184-55350446]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 55341802 55378530 - TESPA1 ENSG00000135426.10 55378530 0.96 0.92 12159 71916
chr12 55413729 55423798 + NEUROD4 ENSG00000123307.3 55413729 0.96 0.0 12160 36717
Expression level of Genes
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miRNAs possibly regulated by vista13594[chr12:55350184-55350446]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results