EnhancerDB
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  3. vista13608[chr12:56043236-56043637]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13608[chr12:56043236-56043637]
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Tissue distribution of vista13608
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Transcription factor that possibly regulate vista13608[chr12:56043236-56043637]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 56043227 56043236 VENTX JASPAR yes 82413988
chr12 56043227 56043236 VENTX JASPAR yes 121070222
chr12 56043238 56043252 POU4F1 JASPAR yes 82413989
chr12 56043238 56043252 POU4F1 JASPAR yes 121070223
chr12 56043238 56043254 POU4F2 JASPAR yes 82413990
chr12 56043238 56043254 POU4F3 JASPAR yes 82413991
chr12 56043238 56043254 POU4F2 JASPAR yes 121070224
chr12 56043238 56043254 POU4F3 JASPAR yes 121070225
chr12 56043243 56043249 TBP TRANSFAC yes 82413992
chr12 56043243 56043249 TBP TRANSFAC yes 121070226
chr12 56043255 56043259 H4TF2 TRANSFAC yes 82413993
chr12 56043255 56043259 H4TF2 TRANSFAC yes 121070227
chr12 56043258 56043275 ZNF410 JASPAR yes 82413994
chr12 56043258 56043275 ZNF410 JASPAR yes 121070228
chr12 56043260 56043272 HNF1B JASPAR yes 82413995
chr12 56043260 56043272 HNF1B JASPAR yes 121070229
chr12 56043286 56043292 MZF1 JASPAR yes 82413996
chr12 56043286 56043292 MZF1 JASPAR yes 121070230
chr12 56043295 56043306 DUX4 JASPAR yes 82413997
chr12 56043295 56043306 DUX4 JASPAR yes 121070231
chr12 56043308 56043319 RUNX1 JASPAR yes 82413998
chr12 56043308 56043319 RUNX1 JASPAR yes 121070232
chr12 56043328 56043335 USF1 JASPAR yes 82413999
chr12 56043328 56043335 USF1 JASPAR yes 121070233
chr12 56043329 56043334 MYC TRANSFAC yes 82414000
chr12 56043329 56043334 USF1 TRANSFAC yes 82414001
chr12 56043329 56043334 USF2 TRANSFAC yes 82414002
chr12 56043329 56043334 MYC TRANSFAC yes 121070234
chr12 56043329 56043334 USF1 TRANSFAC yes 121070235
chr12 56043329 56043334 USF2 TRANSFAC yes 121070236
chr12 56043336 56043341 SP1 TRANSFAC yes 82414003
chr12 56043336 56043341 SP1 TRANSFAC yes 121070237
chr12 56043339 56043345 MAZ TRANSFAC yes 82414004
chr12 56043339 56043345 MAZ TRANSFAC yes 121070238
chr12 56043343 56043357 PLAG1 JASPAR yes 82414005
chr12 56043343 56043357 PLAG1 JASPAR yes 121070239
chr12 56043348 56043352 H1TF2 TRANSFAC yes 82414006
chr12 56043348 56043352 NFE TRANSFAC yes 82414007
chr12 56043348 56043352 SRF TRANSFAC yes 82414008
chr12 56043348 56043352 H1TF2 TRANSFAC yes 121070240
chr12 56043348 56043352 NFE TRANSFAC yes 121070241
chr12 56043348 56043352 SRF TRANSFAC yes 121070242
chr12 56043353 56043358 ETS2 TRANSFAC yes 82414009
chr12 56043353 56043358 ETS2 TRANSFAC yes 121070243
chr12 56043358 56043371 DUXA JASPAR yes 82414010
chr12 56043358 56043371 DUXA JASPAR yes 121070244
chr12 56043359 56043370 DUX4 JASPAR yes 82414011
chr12 56043359 56043370 PHOX2A JASPAR yes 82414012
chr12 56043359 56043370 PROP1 JASPAR yes 82414013
chr12 56043359 56043370 DUX4 JASPAR yes 121070245
chr12 56043359 56043370 PHOX2A JASPAR yes 121070246
chr12 56043359 56043370 PROP1 JASPAR yes 121070247
chr12 56043361 56043366 MYB TRANSFAC yes 82414014
chr12 56043361 56043366 MYB TRANSFAC yes 121070248
chr12 56043363 56043369 JUN TRANSFAC yes 82414015
chr12 56043363 56043369 JUN TRANSFAC yes 121070249
chr12 56043373 56043386 NFKB1 JASPAR yes 82414016
chr12 56043373 56043386 NFKB2 JASPAR yes 82414017
chr12 56043373 56043386 NFKB1 JASPAR yes 121070250
chr12 56043373 56043386 NFKB2 JASPAR yes 121070251
chr12 56043427 56043437 HOXA13 JASPAR yes 82414018
chr12 56043427 56043437 HOXB13 JASPAR yes 82414019
chr12 56043427 56043437 HOXD13 JASPAR yes 82414020
chr12 56043427 56043437 HOXA13 JASPAR yes 121070252
chr12 56043427 56043437 HOXB13 JASPAR yes 121070253
chr12 56043427 56043437 HOXD13 JASPAR yes 121070254
chr12 56043427 56043438 HOXC13 JASPAR yes 82414021
chr12 56043427 56043438 HOXC13 JASPAR yes 121070255
chr12 56043431 56043435 TEAD2 TRANSFAC yes 82414022
chr12 56043431 56043435 TEAD2 TRANSFAC yes 121070256
chr12 56043435 56043446 NFKB1 JASPAR yes 82414023
chr12 56043435 56043446 NFKB1 JASPAR yes 121070257
chr12 56043435 56043448 NFKB1 JASPAR yes 82414024
chr12 56043435 56043448 NFKB1 JASPAR yes 121070258
chr12 56043436 56043446 NFKB1 JASPAR yes 82414025
chr12 56043436 56043446 RELA JASPAR yes 82414026
chr12 56043436 56043446 NFKB1 JASPAR yes 121070259
chr12 56043436 56043446 RELA JASPAR yes 121070260
chr12 56043436 56043447 NFKB1 JASPAR yes 82414027
chr12 56043436 56043447 NFKB1 JASPAR yes 121070261
chr12 56043444 56043448 H1TF2 TRANSFAC yes 82414028
chr12 56043444 56043448 NFE TRANSFAC yes 82414029
chr12 56043444 56043448 SRF TRANSFAC yes 82414030
chr12 56043444 56043448 H1TF2 TRANSFAC yes 121070262
chr12 56043444 56043448 NFE TRANSFAC yes 121070263
chr12 56043444 56043448 SRF TRANSFAC yes 121070264
chr12 56043492 56043504 FOXI1 JASPAR yes 82414031
chr12 56043492 56043504 FOXI1 JASPAR yes 121070265
chr12 56043497 56043512 STAT2 JASPAR yes 82414032
chr12 56043497 56043512 STAT2 JASPAR yes 121070266
chr12 56043538 56043544 MZF1 JASPAR yes 82414033
chr12 56043538 56043544 MZF1 JASPAR yes 121070267
chr12 56043558 56043569 BATF JASPAR yes 82414034
chr12 56043558 56043569 BATF JASPAR yes 121070268
chr12 56043572 56043577 ETS2 TRANSFAC yes 82414035
chr12 56043572 56043577 ETS2 TRANSFAC yes 121070269
chr12 56043578 56043582 TEAD2 TRANSFAC yes 82414036
chr12 56043578 56043582 TEAD2 TRANSFAC yes 121070270
chr12 56043578 56043583 TBP TRANSFAC yes 82414037
chr12 56043578 56043583 TBP TRANSFAC yes 121070271
chr12 56043578 56043584 TMF TRANSFAC yes 82414038
chr12 56043578 56043584 TMF TRANSFAC yes 121070272
chr12 56043596 56043601 GATA2 JASPAR yes 82414039
chr12 56043596 56043601 GATA2 JASPAR yes 121070273
chr12 56043603 56043613 HOXA13 JASPAR yes 82414040
chr12 56043603 56043613 HOXD13 JASPAR yes 82414041
chr12 56043603 56043613 HOXA13 JASPAR yes 121070274
chr12 56043603 56043613 HOXD13 JASPAR yes 121070275
SNP sites on vista13608[chr12:56043236-56043637]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 56043253 rs146974092 G A
POU4F2 POU4F3
2655816
chr12 56043266 rs78913317 A G
HNF1B ZNF410
2655817
chr12 56043311 rs79281641 T C
RUNX1
2655818
chr12 56043445 rs112378702 C T
H1TF2 NFE NFKB1 RELA SRF
2655819
chr12 56043485 rs143472992 G T no 2655820
Genes possibly regulated by vista13608[chr12:56043236-56043637]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 55944983 55946028 + OR6C4 ENSG00000179626.3 55944983 0.0 0.0 12173 1747
chr12 55968199 55969128 + OR2AP1 ENSG00000179615.1 55968199 0.0 0.0 12174 24963
chr12 56030644 56031638 + OR10P1 ENSG00000175398.2 56030644 1.0 0.0 12175 87408
chr12 56075330 56078395 + METTL7B ENSG00000170439.5 56075330 0.98 1.0 12176 68307
chr12 56078352 56109827 - ITGA7 ENSG00000135424.11 56109827 0.81 1.0 12177 33810
chr12 56109820 56113871 + BLOC1S1 ENSG00000135441.3 56109820 0.63 0.95 12179 33817
chr12 56109820 56118487 + RP11-644F5.10 ENSG00000258311.1 56109820 0.87 0.93 12178 33817
chr12 56114151 56118489 + RDH5 ENSG00000135437.5 56114151 0.87 0.99 12180 29486
chr12 56119107 56123491 - CD63 ENSG00000135404.7 56123491 0.56 0.99 12181 20146
chr12 56137064 56150911 + GDF11 ENSG00000135414.5 56137064 0.76 0.99 12182 6573
Expression level of Genes
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miRNAs possibly regulated by vista13608[chr12:56043236-56043637]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results