EnhancerDB
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  3. vista13654[chr12:57512672-57512926]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13654[chr12:57512672-57512926]
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Tissue distribution of vista13654
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Transcription factor that possibly regulate vista13654[chr12:57512672-57512926]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 57512679 57512691 TFAP2A JASPAR yes 82415845
chr12 57512679 57512691 TFAP2B JASPAR yes 82415846
chr12 57512679 57512691 TFAP2C JASPAR yes 82415847
chr12 57512679 57512691 TFAP2A JASPAR yes 121121251
chr12 57512679 57512691 TFAP2B JASPAR yes 121121252
chr12 57512679 57512691 TFAP2C JASPAR yes 121121253
chr12 57512679 57512694 TFAP2A JASPAR yes 82415848
chr12 57512679 57512694 TFAP2C JASPAR yes 82415849
chr12 57512679 57512694 TFAP2A JASPAR yes 121121254
chr12 57512679 57512694 TFAP2C JASPAR yes 121121255
chr12 57512689 57512693 NFE TRANSFAC yes 82415850
chr12 57512689 57512693 NFE TRANSFAC yes 121121256
chr12 57512743 57512749 YY1 JASPAR yes 82415851
chr12 57512743 57512749 YY1 JASPAR yes 121121257
chr12 57512755 57512770 HNF4G JASPAR yes 82415852
chr12 57512755 57512770 HNF4G JASPAR yes 121121258
chr12 57512758 57512762 LFA1 TRANSFAC yes 82415853
chr12 57512758 57512762 LFA1 TRANSFAC yes 121121259
chr12 57512761 57512779 ESR2 JASPAR yes 82415854
chr12 57512761 57512779 ESR2 JASPAR yes 121121260
chr12 57512785 57512795 TFAP4 JASPAR yes 82415855
chr12 57512785 57512795 TFAP4 JASPAR yes 121121261
chr12 57512785 57512800 RUNX2 JASPAR yes 82415856
chr12 57512785 57512800 RUNX2 JASPAR yes 121121262
chr12 57512794 57512798 ESR1 TRANSFAC yes 82415857
chr12 57512794 57512798 ESR1 TRANSFAC yes 121121263
chr12 57512814 57512819 ETS2 TRANSFAC yes 82415858
chr12 57512814 57512819 ETS2 TRANSFAC yes 121121264
chr12 57512814 57512822 FEV JASPAR yes 82415859
chr12 57512814 57512822 FEV JASPAR yes 121121265
chr12 57512830 57512840 ALX3 JASPAR yes 82415860
chr12 57512830 57512840 EMX1 JASPAR yes 82415861
chr12 57512830 57512840 EMX2 JASPAR yes 82415862
chr12 57512830 57512840 EVX1 JASPAR yes 82415863
chr12 57512830 57512840 EVX2 JASPAR yes 82415864
chr12 57512830 57512840 GBX2 JASPAR yes 82415865
chr12 57512830 57512840 GSX1 JASPAR yes 82415866
chr12 57512830 57512840 GSX2 JASPAR yes 82415867
chr12 57512830 57512840 HOXB2 JASPAR yes 82415868
chr12 57512830 57512840 HOXB3 JASPAR yes 82415869
chr12 57512830 57512840 LHX6 JASPAR yes 82415870
chr12 57512830 57512840 MEOX2 JASPAR yes 82415871
chr12 57512830 57512840 MNX1 JASPAR yes 82415872
chr12 57512830 57512840 ALX3 JASPAR yes 121121266
chr12 57512830 57512840 EMX1 JASPAR yes 121121267
chr12 57512830 57512840 EMX2 JASPAR yes 121121268
chr12 57512830 57512840 EVX1 JASPAR yes 121121269
chr12 57512830 57512840 EVX2 JASPAR yes 121121270
chr12 57512830 57512840 GBX2 JASPAR yes 121121271
chr12 57512830 57512840 GSX1 JASPAR yes 121121272
chr12 57512830 57512840 GSX2 JASPAR yes 121121273
chr12 57512830 57512840 HOXB2 JASPAR yes 121121274
chr12 57512830 57512840 HOXB3 JASPAR yes 121121275
chr12 57512830 57512840 LHX6 JASPAR yes 121121276
chr12 57512830 57512840 MEOX2 JASPAR yes 121121277
chr12 57512830 57512840 MNX1 JASPAR yes 121121278
chr12 57512831 57512839 DLX6 JASPAR yes 82415873
chr12 57512831 57512839 EN1 JASPAR yes 82415874
chr12 57512831 57512839 LBX1 JASPAR yes 82415875
chr12 57512831 57512839 PAX4 JASPAR yes 82415876
chr12 57512831 57512839 PDX1 JASPAR yes 82415877
chr12 57512831 57512839 VAX1 JASPAR yes 82415878
chr12 57512831 57512839 VAX2 JASPAR yes 82415879
chr12 57512831 57512839 VSX1 JASPAR yes 82415880
chr12 57512831 57512839 VSX2 JASPAR yes 82415881
chr12 57512831 57512839 DLX6 JASPAR yes 121121279
chr12 57512831 57512839 EN1 JASPAR yes 121121280
chr12 57512831 57512839 LBX1 JASPAR yes 121121281
chr12 57512831 57512839 PAX4 JASPAR yes 121121282
chr12 57512831 57512839 PDX1 JASPAR yes 121121283
chr12 57512831 57512839 VAX1 JASPAR yes 121121284
chr12 57512831 57512839 VAX2 JASPAR yes 121121285
chr12 57512831 57512839 VSX1 JASPAR yes 121121286
chr12 57512831 57512839 VSX2 JASPAR yes 121121287
chr12 57512833 57512841 HOXA5 JASPAR yes 82415882
chr12 57512833 57512841 HOXA5 JASPAR yes 121121288
chr12 57512838 57512842 NFE TRANSFAC yes 82415883
chr12 57512838 57512842 NFE TRANSFAC yes 121121289
chr12 57512886 57512898 POU2F1 JASPAR yes 82415884
chr12 57512886 57512898 POU2F1 JASPAR yes 121121290
chr12 57512901 57512922 ZNF263 JASPAR yes 82415885
chr12 57512901 57512922 ZNF263 JASPAR yes 121121291
chr12 57512902 57512923 ZNF263 JASPAR yes 82415886
chr12 57512902 57512923 ZNF263 JASPAR yes 121121292
chr12 57512905 57512926 ZNF263 JASPAR yes 82415887
chr12 57512905 57512926 ZNF263 JASPAR yes 121121293
chr12 57512908 57512913 ETS2 TRANSFAC yes 82415888
chr12 57512908 57512913 ETS2 TRANSFAC yes 121121294
chr12 57512912 57512925 ELF3 JASPAR yes 82415889
chr12 57512912 57512925 ELF3 JASPAR yes 121121295
chr12 57512913 57512923 ETV6 JASPAR yes 82415890
chr12 57512913 57512923 ETV6 JASPAR yes 121121296
chr12 57512913 57512924 ELF5 JASPAR yes 82415891
chr12 57512913 57512924 ELF5 JASPAR yes 121121297
chr12 57512913 57512925 EHF JASPAR yes 82415892
chr12 57512913 57512925 ELF4 JASPAR yes 82415893
chr12 57512913 57512925 EHF JASPAR yes 121121298
chr12 57512913 57512925 ELF4 JASPAR yes 121121299
chr12 57512913 57512926 ELF1 JASPAR yes 82415894
chr12 57512913 57512926 ELF1 JASPAR yes 121121300
chr12 57512913 57512927 SPI1 JASPAR yes 82415895
chr12 57512913 57512927 SPIC JASPAR yes 82415896
chr12 57512913 57512927 SPI1 JASPAR yes 121121301
chr12 57512913 57512927 SPIC JASPAR yes 121121302
chr12 57512914 57512921 SPI1 JASPAR yes 82415897
chr12 57512914 57512921 SPI1 JASPAR yes 121121303
chr12 57512914 57512922 EHF JASPAR yes 82415898
chr12 57512914 57512922 EHF JASPAR yes 121121304
chr12 57512917 57512927 POU6F2 JASPAR yes 82415899
chr12 57512917 57512927 POU6F2 JASPAR yes 121121305
chr12 57512921 57512925 YY1 TRANSFAC yes 82415900
chr12 57512921 57512925 YY1 TRANSFAC yes 121121306
SNP sites on vista13654[chr12:57512672-57512926]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 57512795 rs370609699 G A
ESR1 RUNX2 TFAP4
2661782
chr12 57512832 rs74428418 C T
ALX3 DLX6 EMX1 EMX2 EN1 EVX1 EVX2 GBX2 GSX1 GSX2 HOXB2 HOXB3 LBX1 LHX6 MEOX2 MNX1 PAX4 PDX1 VAX1 VAX2 VSX1 VSX2
2661783
chr12 57512859 rs114439996 C G no 2661784
chr12 57512875 rs11172106 C G no 2661785
chr12 57512918 rs143743631 T G
EHF ELF1 ELF3 ELF4 ELF5 ETV6 POU6F2 SPI1 SPIC ZNF263
2661786
Genes possibly regulated by vista13654[chr12:57512672-57512926]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 57403784 57422667 - TAC3 ENSG00000166863.7 57422667 0.89 0.98 12233 9995
chr12 57422301 57444982 - MYO1A ENSG00000166866.8 57444982 0.99 0.98 12234 32310
chr12 57449426 57481846 - TMEM194A ENSG00000166881.5 57481846 0.76 0.99 12235 69174
chr12 57482677 57489259 + NAB2 ENSG00000166886.8 57482677 0.8 1.0 12236 70005
chr12 57489191 57525922 - STAT6 ENSG00000166888.6 57525922 0.59 1.0 12237 87004
chr12 57522276 57607134 + LRP1 ENSG00000123384.9 57522276 0.78 1.0 12238 90650
chr12 57610578 57620232 + NXPH4 ENSG00000182379.9 57610578 0.84 1.0 12239 2348
Expression level of Genes
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miRNAs possibly regulated by vista13654[chr12:57512672-57512926]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results