EnhancerDB
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  3. vista13677[chr12:58259163-58259391]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13677[chr12:58259163-58259391]
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Tissue distribution of vista13677
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Transcription factor that possibly regulate vista13677[chr12:58259163-58259391]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 58258706 58259599 E2F1 UCSC Txn Factor no Conserved 108040625
chr12 58258774 58259631 POLR2A UCSC Txn Factor no Conserved 108040626
chr12 58258928 58259301 PHF8 UCSC Txn Factor no Conserved 108040635
chr12 58259084 58259323 CEBPB UCSC Txn Factor no Conserved 108040658
chr12 58259152 58259163 E2F1 JASPAR yes 82416937
chr12 58259152 58259163 E2F1 JASPAR yes 121144230
chr12 58259165 58259171 SP1 TRANSFAC yes 82416938
chr12 58259165 58259171 SP1 TRANSFAC yes 121144231
chr12 58259175 58259186 NRF1 JASPAR yes 82416939
chr12 58259175 58259186 NRF1 JASPAR yes 121144232
chr12 58259185 58259195 TEAD1 JASPAR yes 82416940
chr12 58259185 58259195 TEAD4 JASPAR yes 82416941
chr12 58259185 58259195 TEAD1 JASPAR yes 121144233
chr12 58259185 58259195 TEAD4 JASPAR yes 121144234
chr12 58259185 58259197 TEAD1 JASPAR yes 82416942
chr12 58259185 58259197 TEAD1 JASPAR yes 121144235
chr12 58259186 58259194 TEAD3 JASPAR yes 82416943
chr12 58259186 58259194 TEAD3 JASPAR yes 121144236
chr12 58259197 58259208 CEBPA JASPAR yes 82416944
chr12 58259197 58259208 CEBPA JASPAR yes 121144237
chr12 58259198 58259208 CEBPG JASPAR yes 82416945
chr12 58259198 58259208 CEBPG JASPAR yes 121144238
chr12 58259198 58259209 CEBPB JASPAR yes 82416946
chr12 58259198 58259209 CEBPB JASPAR yes 121144239
chr12 58259201 58259214 SCRT2 JASPAR yes 82416947
chr12 58259201 58259214 SCRT2 JASPAR yes 121144240
chr12 58259205 58259215 MSC JASPAR yes 82416948
chr12 58259205 58259215 MSC JASPAR yes 121144241
chr12 58259221 58259227 SP1 TRANSFAC yes 82416949
chr12 58259221 58259227 SP1 TRANSFAC yes 121144242
chr12 58259222 58259227 SP1 TRANSFAC yes 82416950
chr12 58259222 58259227 SP1 TRANSFAC yes 121144243
chr12 58259234 58259238 LFA1 TRANSFAC yes 82416951
chr12 58259234 58259238 LFA1 TRANSFAC yes 121144244
chr12 58259239 58259244 SP1 TRANSFAC yes 82416952
chr12 58259239 58259244 SP1 TRANSFAC yes 121144245
chr12 58259240 58259245 SP1 TRANSFAC yes 82416953
chr12 58259240 58259245 SP1 TRANSFAC yes 121144246
chr12 58259240 58259246 SP1 TRANSFAC yes 82416954
chr12 58259240 58259246 SP1 TRANSFAC yes 121144247
chr12 58259243 58259248 SP1 TRANSFAC yes 82416955
chr12 58259243 58259248 SP1 TRANSFAC yes 121144248
chr12 58259258 58259263 SP1 TRANSFAC yes 82416956
chr12 58259258 58259263 SP1 TRANSFAC yes 121144249
chr12 58259258 58259272 PLAG1 JASPAR yes 82416957
chr12 58259258 58259272 PLAG1 JASPAR yes 121144250
chr12 58259259 58259274 ZBTB33 JASPAR yes 82416958
chr12 58259259 58259274 ZBTB33 JASPAR yes 121144251
chr12 58259262 58259277 ZBTB33 JASPAR yes 82416959
chr12 58259262 58259277 ZBTB33 JASPAR yes 121144252
chr12 58259279 58259297 ESR1 JASPAR yes 82416960
chr12 58259279 58259297 ESR1 JASPAR yes 121144253
chr12 58259289 58259294 SP1 TRANSFAC yes 82416961
chr12 58259289 58259294 SP1 TRANSFAC yes 121144254
chr12 58259312 58259321 NKX2-8 JASPAR yes 82416962
chr12 58259312 58259321 NKX2-8 JASPAR yes 121144255
chr12 58259312 58259322 NKX2-3 JASPAR yes 82416963
chr12 58259312 58259322 NKX2-3 JASPAR yes 121144256
chr12 58259313 58259321 ISL2 JASPAR yes 82416964
chr12 58259313 58259321 ISL2 JASPAR yes 121144257
chr12 58259313 58259322 NKX3-2 JASPAR yes 82416965
chr12 58259313 58259322 NKX3-2 JASPAR yes 121144258
chr12 58259337 58259351 EBF1 JASPAR yes 82416966
chr12 58259337 58259351 EBF1 JASPAR yes 121144259
chr12 58259358 58259368 SP1 JASPAR yes 82416967
chr12 58259358 58259368 SP1 JASPAR yes 121144260
chr12 58259365 58259370 SP1 TRANSFAC yes 82416968
chr12 58259365 58259370 SP1 TRANSFAC yes 121144261
chr12 58259376 58259396 TP63 JASPAR yes 82416969
chr12 58259376 58259396 TP63 JASPAR yes 121144262
SNP sites on vista13677[chr12:58259163-58259391]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 58259310 rs556486685 G A,C
CEBPB E2F1 POLR2A
2664601
Genes possibly regulated by vista13677[chr12:58259163-58259391]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 58156117 58162769 - CYP27B1 ENSG00000111012.5 58162769 0.95 1.0 12266 3606
chr12 58162254 58166576 - METTL1 ENSG00000037897.12 58166576 0.79 1.0 12267 7413
chr12 58165275 58176324 + METTL21B ENSG00000123427.11 58165275 0.67 0.99 12268 6112
chr12 58166811 58180829 + RP11-571M6.15 ENSG00000257921.1 58166811 0.96 0.96 12269 7648
chr12 58176372 58201854 + TSFM ENSG00000123297.12 58176372 0.78 0.98 12270 17209
chr12 58191159 58212487 - AVIL ENSG00000135407.6 58212487 0.83 1.0 12271 53324
chr12 58213710 58240522 - CTDSP2 ENSG00000175215.5 58240522 0.65 1.0 12272 81359
chr12 58335324 58351052 + XRCC6BP1 ENSG00000166896.3 58335324 0.8 0.99 12273 24067
Expression level of Genes
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miRNAs possibly regulated by vista13677[chr12:58259163-58259391]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr12 58218403 58218424 - hsa-miR-26a-2-3p MIMAT0004681 58240493 0.0068070965321327115 0.537666 0.501351 306
Expression level of miRNAs
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