EnhancerDB
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  3. vista1374[chr1:42512214-42512486]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1374[chr1:42512214-42512486]
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Tissue distribution of vista1374
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Transcription factor that possibly regulate vista1374[chr1:42512214-42512486]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 42512202 42512214 FOXC2 JASPAR yes 28444701
chr1 42512202 42512214 FOXC2 JASPAR yes 118280972
chr1 42512210 42512216 TCF4 TRANSFAC yes 28444702
chr1 42512210 42512216 TCF4 TRANSFAC yes 118280973
chr1 42512212 42512233 IRF1 JASPAR yes 28444703
chr1 42512212 42512233 IRF1 JASPAR yes 118280974
chr1 42512215 42512229 ONECUT3 JASPAR yes 28444704
chr1 42512215 42512229 ONECUT3 JASPAR yes 118280975
chr1 42512217 42512221 YY1 TRANSFAC yes 28444705
chr1 42512217 42512221 YY1 TRANSFAC yes 118280976
chr1 42512217 42512238 IRF1 JASPAR yes 28444706
chr1 42512217 42512238 IRF1 JASPAR yes 118280977
chr1 42512219 42512231 FOXC2 JASPAR yes 28444707
chr1 42512219 42512231 FOXC2 JASPAR yes 118280978
chr1 42512221 42512225 YY1 TRANSFAC yes 28444708
chr1 42512221 42512225 YY1 TRANSFAC yes 118280979
chr1 42512223 42512238 FOXP1 JASPAR yes 28444709
chr1 42512223 42512238 FOXP1 JASPAR yes 118280980
chr1 42512228 42512249 MAFG JASPAR yes 28444710
chr1 42512228 42512249 MAFG JASPAR yes 118280981
chr1 42512233 42512251 MAFF JASPAR yes 28444711
chr1 42512233 42512251 MAFF JASPAR yes 118280982
chr1 42512234 42512245 NFE2L2 JASPAR yes 28444712
chr1 42512234 42512245 NFE2L2 JASPAR yes 118280983
chr1 42512234 42512249 MAFK JASPAR yes 28444713
chr1 42512234 42512249 MAFK JASPAR yes 118280984
chr1 42512253 42512261 EHF JASPAR yes 28444714
chr1 42512253 42512261 EHF JASPAR yes 118280985
chr1 42512257 42512273 GLIS1 JASPAR yes 28444715
chr1 42512257 42512273 GLIS1 JASPAR yes 118280986
chr1 42512263 42512268 TFAP2A TRANSFAC yes 28444716
chr1 42512263 42512268 TFAP2A TRANSFAC yes 118280987
chr1 42512263 42512269 MZF1 JASPAR yes 28444717
chr1 42512263 42512269 MZF1 JASPAR yes 118280988
chr1 42512277 42512287 SP1 JASPAR yes 28444718
chr1 42512277 42512287 SP1 JASPAR yes 118280989
chr1 42512279 42512285 MAZ TRANSFAC yes 28444719
chr1 42512279 42512285 MAZ TRANSFAC yes 118280990
chr1 42512285 42512289 H4TF2 TRANSFAC yes 28444720
chr1 42512285 42512289 H4TF2 TRANSFAC yes 118280991
chr1 42512292 42512298 LEF1 TRANSFAC yes 28444721
chr1 42512292 42512298 SOX10 JASPAR yes 28444722
chr1 42512292 42512298 LEF1 TRANSFAC yes 118280992
chr1 42512292 42512298 SOX10 JASPAR yes 118280993
chr1 42512309 42512327 NR3C1 JASPAR yes 28444723
chr1 42512309 42512327 NR3C1 JASPAR yes 118280994
chr1 42512335 42512339 NFE TRANSFAC yes 28444724
chr1 42512335 42512339 NFE TRANSFAC yes 118280995
chr1 42512338 42512358 RREB1 JASPAR yes 28444725
chr1 42512338 42512358 RREB1 JASPAR yes 118280996
chr1 42512342 42512352 ZNF740 JASPAR yes 28444726
chr1 42512342 42512352 ZNF740 JASPAR yes 118280997
chr1 42512344 42512364 RREB1 JASPAR yes 28444727
chr1 42512344 42512364 RREB1 JASPAR yes 118280998
chr1 42512345 42512365 RREB1 JASPAR yes 28444728
chr1 42512345 42512365 RREB1 JASPAR yes 118280999
chr1 42512346 42512355 ZEB1 JASPAR yes 28444729
chr1 42512346 42512355 ZEB1 JASPAR yes 118281000
chr1 42512347 42512357 TCF4 JASPAR yes 28444730
chr1 42512347 42512357 TCF4 JASPAR yes 118281001
chr1 42512348 42512357 SNAI2 JASPAR yes 28444731
chr1 42512348 42512357 SNAI2 JASPAR yes 118281002
chr1 42512349 42512354 USF2 TRANSFAC yes 28444732
chr1 42512349 42512354 USF2 TRANSFAC yes 118281003
chr1 42512353 42512359 NFIC JASPAR yes 28444733
chr1 42512353 42512359 NFIC JASPAR yes 118281004
chr1 42512363 42512383 PPARG JASPAR yes 28444734
chr1 42512363 42512383 PPARG JASPAR yes 118281005
chr1 42512380 42512383 MYB TRANSFAC yes 28444735
chr1 42512380 42512383 MYB TRANSFAC yes 118281006
chr1 42512382 42512392 SP1 JASPAR yes 28444736
chr1 42512382 42512392 SP1 JASPAR yes 118281007
chr1 42512394 42512397 MYB TRANSFAC yes 28444737
chr1 42512394 42512397 MYB TRANSFAC yes 118281008
chr1 42512404 42512409 ETS2 TRANSFAC yes 28444738
chr1 42512404 42512409 ETS2 TRANSFAC yes 118281009
chr1 42512436 42512442 TCF4 TRANSFAC yes 28444739
chr1 42512436 42512442 TCF4 TRANSFAC yes 118281010
chr1 42512454 42512469 PRDM1 JASPAR yes 28444740
chr1 42512454 42512469 PRDM1 JASPAR yes 118281011
chr1 42512456 42512465 ZEB1 JASPAR yes 28444741
chr1 42512456 42512465 ZEB1 JASPAR yes 118281012
chr1 42512472 42512484 NHLH1 JASPAR yes 28444742
chr1 42512472 42512484 NHLH1 JASPAR yes 118281013
chr1 42512473 42512483 MSC JASPAR yes 28444743
chr1 42512473 42512483 NHLH1 JASPAR yes 28444744
chr1 42512473 42512483 TFAP4 JASPAR yes 28444745
chr1 42512473 42512483 MSC JASPAR yes 118281014
chr1 42512473 42512483 NHLH1 JASPAR yes 118281015
chr1 42512473 42512483 TFAP4 JASPAR yes 118281016
SNP sites on vista1374[chr1:42512214-42512486]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 42512223 rs112628267 A AT,ATT
FOXC2 FOXP1 IRF1 ONECUT3 YY1
266688
chr1 42512223 rs397862102 A AT
FOXC2 FOXP1 IRF1 ONECUT3 YY1
266689
chr1 42512223 rs561279284 A AT,ATT
FOXC2 FOXP1 IRF1 ONECUT3 YY1
266690
chr1 42512225 rs201528615 T TTA
FOXC2 FOXP1 IRF1 ONECUT3 YY1
266691
chr1 42512261 rs144137132 A T
EHF GLIS1
266692
chr1 42512361 rs11799411 C T
RREB1
266693
chr1 42512379 rs547653766 T A
PPARG
266694
Genes possibly regulated by vista1374[chr1:42512214-42512486]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 41972036 42501596 - HIVEP3 ENSG00000127124.9 42501596 0.92 1.0 577 89382
Expression level of Genes
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miRNAs possibly regulated by vista1374[chr1:42512214-42512486]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results