EnhancerDB
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  3. vista1377[chr1:42934748-42935131]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1377[chr1:42934748-42935131]
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Tissue distribution of vista1377
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Transcription factor that possibly regulate vista1377[chr1:42934748-42935131]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 42934748 42934763 FOXP1 JASPAR yes 118281067
chr1 42934749 42934760 FOXA1 JASPAR yes 118281068
chr1 42934749 42934764 FOXA1 JASPAR yes 118281069
chr1 42934750 42934762 FOXC2 JASPAR yes 118281070
chr1 42934751 42934763 FOXI1 JASPAR yes 118281071
chr1 42934858 42934862 LFA1 TRANSFAC yes 118281072
chr1 42934866 42934870 TEAD2 TRANSFAC yes 118281073
chr1 42934883 42934889 TBP TRANSFAC yes 118281074
chr1 42934883 42934894 FOXC1 JASPAR yes 118281075
chr1 42934883 42934895 FOXC2 JASPAR yes 118281076
chr1 42934893 42934908 MEF2C JASPAR yes 118281077
chr1 42934894 42934909 MEF2A JASPAR yes 118281078
chr1 42934895 42934907 MEF2A JASPAR yes 118281079
chr1 42934896 42934906 MEF2A JASPAR yes 118281080
chr1 42934906 42934915 HIC2 JASPAR yes 118281081
chr1 42934909 42934913 LFA1 TRANSFAC yes 118281082
chr1 42934909 42934929 TP63 JASPAR yes 118281083
chr1 42934910 42934925 FOXA1 JASPAR yes 118281084
chr1 42934910 42934928 TP53 JASPAR yes 118281085
chr1 42934910 42934928 TP73 JASPAR yes 118281086
chr1 42934914 42934924 NFIA JASPAR yes 118281087
chr1 42934914 42934925 FOXA1 JASPAR yes 118281088
chr1 42934915 42934924 NFIX JASPAR yes 118281089
chr1 42934916 42934922 NFIC JASPAR yes 118281090
chr1 42934922 42934926 YY1 TRANSFAC yes 118281091
chr1 42934945 42934966 MAFG JASPAR yes 118281092
chr1 42934946 42934960 JUN JASPAR yes 118281093
chr1 42934948 42934959 BATF JASPAR yes 118281094
chr1 42934949 42934960 FOSL2 JASPAR yes 118281095
chr1 42934949 42934960 JUNB JASPAR yes 118281096
chr1 42934949 42934960 NFE2L2 JASPAR yes 118281097
chr1 42934950 42934961 FOS JASPAR yes 118281098
chr1 42934950 42934961 FOSL1 JASPAR yes 118281099
chr1 42934950 42934961 JUND JASPAR yes 118281100
chr1 42934951 42934969 ESR1 JASPAR yes 118281101
chr1 42934952 42934959 JUN TRANSFAC yes 118281102
chr1 42935003 42935008 GATA2 JASPAR yes 118281103
chr1 42935011 42935015 YY1 TRANSFAC yes 118281104
chr1 42935021 42935036 FOXA1 JASPAR yes 118281105
chr1 42935023 42935035 FOXC2 JASPAR yes 118281106
chr1 42935024 42935032 FOXO3 JASPAR yes 118281107
chr1 42935039 42935060 REST JASPAR yes 118281108
chr1 42935043 42935052 SOX9 JASPAR yes 118281109
SNP sites on vista1377[chr1:42934748-42935131]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 42934837 rs189078541 C T no 268397
chr1 42934840 rs540841241 C T no 268398
chr1 42934841 rs560609522 G A no 268399
chr1 42934884 rs551294001 T TA
FOXC1 FOXC2 TBP
268400
chr1 42934906 rs140696984 A G
HIC2 MEF2A MEF2C
268401
Genes possibly regulated by vista1377[chr1:42934748-42935131]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 42846466 42888249 + RIMKLA ENSG00000177181.10 42846466 0.84 1.0 581 11718
chr1 42896000 42921938 - ZMYND12 ENSG00000066185.8 42921938 0.83 1.0 582 87190
chr1 42921788 42939056 + PPCS ENSG00000127125.7 42921788 0.65 0.99 583 87040
chr1 42929001 43120335 + CCDC30 ENSG00000186409.10 42929001 0.91 1.0 584 94253
Expression level of Genes
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miRNAs possibly regulated by vista1377[chr1:42934748-42935131]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results