EnhancerDB
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  3. vista1390[chr1:43428386-43429108]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1390[chr1:43428386-43429108]
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Tissue distribution of vista1390
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Transcription factor that possibly regulate vista1390[chr1:43428386-43429108]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 43428235 43430315 POLR2A UCSC Txn Factor no Conserved 107803010
chr1 43428369 43428389 TP63 JASPAR yes 28471038
chr1 43428369 43428389 TP63 JASPAR yes 118281989
chr1 43428389 43428395 PEA3 TRANSFAC yes 28471039
chr1 43428389 43428395 PEA3 TRANSFAC yes 118281990
chr1 43428416 43428432 T JASPAR yes 28471040
chr1 43428416 43428432 T JASPAR yes 118281991
chr1 43428424 43428432 TBX15 JASPAR yes 28471041
chr1 43428424 43428432 TBX1 JASPAR yes 28471042
chr1 43428424 43428432 TBX4 JASPAR yes 28471043
chr1 43428424 43428432 TBX5 JASPAR yes 28471044
chr1 43428424 43428432 TBX15 JASPAR yes 118281992
chr1 43428424 43428432 TBX1 JASPAR yes 118281993
chr1 43428424 43428432 TBX4 JASPAR yes 118281994
chr1 43428424 43428432 TBX5 JASPAR yes 118281995
chr1 43428427 43428439 HES7 JASPAR yes 28471045
chr1 43428427 43428439 PKNOX1 JASPAR yes 28471046
chr1 43428427 43428439 PKNOX2 JASPAR yes 28471047
chr1 43428427 43428439 TGIF2 JASPAR yes 28471048
chr1 43428427 43428439 HES7 JASPAR yes 118281996
chr1 43428427 43428439 PKNOX1 JASPAR yes 118281997
chr1 43428427 43428439 PKNOX2 JASPAR yes 118281998
chr1 43428427 43428439 TGIF2 JASPAR yes 118281999
chr1 43428429 43428444 RFX5 JASPAR yes 28471049
chr1 43428429 43428444 RFX5 JASPAR yes 118282000
chr1 43428431 43428444 SMAD2 JASPAR yes 28471050
chr1 43428431 43428444 SMAD2 JASPAR yes 118282001
chr1 43428438 43428443 SP1 TRANSFAC yes 28471051
chr1 43428438 43428443 SP1 TRANSFAC yes 118282002
chr1 43428478 43428498 RREB1 JASPAR yes 28471052
chr1 43428478 43428498 RREB1 JASPAR yes 118282003
chr1 43428479 43428489 SP1 JASPAR yes 28471053
chr1 43428479 43428489 SP1 JASPAR yes 118282004
chr1 43428480 43428500 RREB1 JASPAR yes 28471054
chr1 43428480 43428500 RREB1 JASPAR yes 118282005
chr1 43428481 43428501 RREB1 JASPAR yes 28471055
chr1 43428481 43428501 RREB1 JASPAR yes 118282006
chr1 43428482 43428487 SP1 TRANSFAC yes 28471056
chr1 43428482 43428487 SP1 TRANSFAC yes 118282007
chr1 43428483 43428493 ZNF740 JASPAR yes 28471057
chr1 43428483 43428493 ZNF740 JASPAR yes 118282008
chr1 43428483 43428497 PLAG1 JASPAR yes 28471058
chr1 43428483 43428497 PLAG1 JASPAR yes 118282009
chr1 43428485 43428494 SP1 TRANSFAC yes 28471059
chr1 43428485 43428494 SP1 TRANSFAC yes 118282010
chr1 43428485 43428495 SP1 JASPAR yes 28471060
chr1 43428485 43428495 SP1 JASPAR yes 118282011
chr1 43428485 43428505 RREB1 JASPAR yes 28471061
chr1 43428485 43428505 RREB1 JASPAR yes 118282012
chr1 43428485 43428506 ZNF263 JASPAR yes 28471062
chr1 43428485 43428506 ZNF263 JASPAR yes 118282013
chr1 43428486 43428506 RREB1 JASPAR yes 28471063
chr1 43428486 43428506 RREB1 JASPAR yes 118282014
chr1 43428487 43428493 MAZ TRANSFAC yes 28471064
chr1 43428487 43428493 MAZ TRANSFAC yes 118282015
chr1 43428491 43428511 RREB1 JASPAR yes 28471065
chr1 43428491 43428511 RREB1 JASPAR yes 118282016
chr1 43428492 43428512 RREB1 JASPAR yes 28471066
chr1 43428492 43428512 RREB1 JASPAR yes 118282017
chr1 43428493 43428505 ZBTB7C JASPAR yes 28471067
chr1 43428493 43428505 ZBTB7C JASPAR yes 118282018
chr1 43428494 43428514 RREB1 JASPAR yes 28471068
chr1 43428494 43428514 RREB1 JASPAR yes 118282019
chr1 43428505 43428517 ZBTB7C JASPAR yes 28471069
chr1 43428505 43428517 ZBTB7C JASPAR yes 118282020
chr1 43428508 43428520 ZBTB7C JASPAR yes 28471070
chr1 43428508 43428520 ZBTB7C JASPAR yes 118282021
chr1 43428530 43428536 SP1 TRANSFAC yes 28471071
chr1 43428530 43428536 SP1 TRANSFAC yes 118282022
chr1 43428531 43428536 SP1 TRANSFAC yes 28471072
chr1 43428531 43428536 SP1 TRANSFAC yes 118282023
chr1 43428532 43428537 SP1 TRANSFAC yes 28471073
chr1 43428532 43428537 SP1 TRANSFAC yes 118282024
chr1 43428536 43428540 H4TF2 TRANSFAC yes 28471074
chr1 43428536 43428540 H4TF2 TRANSFAC yes 118282025
chr1 43428556 43428570 JUN JASPAR yes 28471075
chr1 43428556 43428570 JUN JASPAR yes 118282026
chr1 43428559 43428570 FOSL2 JASPAR yes 28471076
chr1 43428559 43428570 JUNB JASPAR yes 28471077
chr1 43428559 43428570 FOSL2 JASPAR yes 118282027
chr1 43428559 43428570 JUNB JASPAR yes 118282028
chr1 43428560 43428571 FOSL1 JASPAR yes 28471078
chr1 43428560 43428571 FOSL1 JASPAR yes 118282029
chr1 43428562 43428568 JUN TRANSFAC yes 28471079
chr1 43428562 43428568 JUN TRANSFAC yes 118282030
chr1 43428568 43428573 SP1 TRANSFAC yes 28471080
chr1 43428568 43428573 SP1 TRANSFAC yes 118282031
chr1 43428569 43428574 SP1 TRANSFAC yes 28471081
chr1 43428569 43428574 SP1 TRANSFAC yes 118282032
chr1 43428589 43428607 SRF JASPAR yes 28471082
chr1 43428589 43428607 SRF JASPAR yes 118282033
chr1 43428591 43428609 SRF JASPAR yes 28471083
chr1 43428591 43428609 SRF JASPAR yes 118282034
chr1 43428623 43428629 PEA3 TRANSFAC yes 28471084
chr1 43428623 43428629 PEA3 TRANSFAC yes 118282035
chr1 43428630 43428648 MAFF JASPAR yes 28471085
chr1 43428630 43428648 MAFF JASPAR yes 118282036
chr1 43428632 43428643 NRL JASPAR yes 28471086
chr1 43428632 43428643 NRL JASPAR yes 118282037
chr1 43428632 43428647 MAFK JASPAR yes 28471087
chr1 43428632 43428647 MAFK JASPAR yes 118282038
chr1 43428632 43428653 MAFG JASPAR yes 28471088
chr1 43428632 43428653 MAFG JASPAR yes 118282039
chr1 43428635 43428646 BATF JASPAR yes 28471089
chr1 43428635 43428646 BATF JASPAR yes 118282040
chr1 43428636 43428647 JUNB JASPAR yes 28471090
chr1 43428636 43428647 NFE2L2 JASPAR yes 28471091
chr1 43428636 43428647 JUNB JASPAR yes 118282041
chr1 43428636 43428647 NFE2L2 JASPAR yes 118282042
chr1 43428637 43428648 FOS JASPAR yes 28471092
chr1 43428637 43428648 FOSL1 JASPAR yes 28471093
chr1 43428637 43428648 JUND JASPAR yes 28471094
chr1 43428637 43428648 FOS JASPAR yes 118282043
chr1 43428637 43428648 FOSL1 JASPAR yes 118282044
chr1 43428637 43428648 JUND JASPAR yes 118282045
chr1 43428637 43428655 MAFF JASPAR yes 28471095
chr1 43428637 43428655 MAFF JASPAR yes 118282046
chr1 43428638 43428649 JUNB JASPAR yes 28471096
chr1 43428638 43428649 JUNB JASPAR yes 118282047
chr1 43428638 43428652 JUN JASPAR yes 28471097
chr1 43428638 43428652 JUN JASPAR yes 118282048
chr1 43428638 43428653 MAFK JASPAR yes 28471098
chr1 43428638 43428653 MAFK JASPAR yes 118282049
chr1 43428639 43428646 JUN TRANSFAC yes 28471099
chr1 43428639 43428646 JUN TRANSFAC yes 118282050
chr1 43428639 43428650 BATF JASPAR yes 28471100
chr1 43428639 43428650 BATF JASPAR yes 118282051
chr1 43428666 43428671 GATA2 JASPAR yes 28471101
chr1 43428666 43428671 GATA2 JASPAR yes 118282052
chr1 43428674 43428684 SP1 JASPAR yes 28471102
chr1 43428674 43428684 SP1 JASPAR yes 118282053
chr1 43428684 43428690 ETS1 JASPAR yes 28471103
chr1 43428684 43428690 SPI1 JASPAR yes 28471104
chr1 43428684 43428690 ETS1 JASPAR yes 118282054
chr1 43428684 43428690 SPI1 JASPAR yes 118282055
chr1 43428685 43428696 NFKB1 JASPAR yes 28471105
chr1 43428685 43428696 NFKB1 JASPAR yes 118282056
chr1 43428694 43428703 PITX3 JASPAR yes 28471106
chr1 43428694 43428703 PITX3 JASPAR yes 118282057
chr1 43428694 43428704 GSC2 JASPAR yes 28471107
chr1 43428694 43428704 GSC JASPAR yes 28471108
chr1 43428694 43428704 GSC2 JASPAR yes 118282058
chr1 43428694 43428704 GSC JASPAR yes 118282059
chr1 43428708 43428719 CEBPA JASPAR yes 28471109
chr1 43428708 43428719 CEBPA JASPAR yes 118282060
chr1 43428709 43428720 CEBPB JASPAR yes 28471110
chr1 43428709 43428720 CEBPB JASPAR yes 118282061
chr1 43428735 43428749 FOXF2 JASPAR yes 28471111
chr1 43428735 43428749 FOXF2 JASPAR yes 118282062
chr1 43428735 43428750 FOXP1 JASPAR yes 28471112
chr1 43428735 43428750 FOXP1 JASPAR yes 118282063
chr1 43428738 43428749 FOXP2 JASPAR yes 28471113
chr1 43428738 43428749 FOXP2 JASPAR yes 118282064
chr1 43428739 43428747 FOXO3 JASPAR yes 28471114
chr1 43428739 43428747 FOXO3 JASPAR yes 118282065
chr1 43428740 43428747 FOXD2 JASPAR yes 28471115
chr1 43428740 43428747 FOXI1 JASPAR yes 28471116
chr1 43428740 43428747 FOXL1 JASPAR yes 28471117
chr1 43428740 43428747 FOXO4 JASPAR yes 28471118
chr1 43428740 43428747 FOXO6 JASPAR yes 28471119
chr1 43428740 43428747 FOXP3 JASPAR yes 28471120
chr1 43428740 43428747 FOXD2 JASPAR yes 118282066
chr1 43428740 43428747 FOXI1 JASPAR yes 118282067
chr1 43428740 43428747 FOXL1 JASPAR yes 118282068
chr1 43428740 43428747 FOXO4 JASPAR yes 118282069
chr1 43428740 43428747 FOXO6 JASPAR yes 118282070
chr1 43428740 43428747 FOXP3 JASPAR yes 118282071
chr1 43428740 43428748 FOXD1 JASPAR yes 28471121
chr1 43428740 43428748 FOXG1 JASPAR yes 28471122
chr1 43428740 43428748 FOXO3 JASPAR yes 28471123
chr1 43428740 43428748 FOXD1 JASPAR yes 118282072
chr1 43428740 43428748 FOXG1 JASPAR yes 118282073
chr1 43428740 43428748 FOXO3 JASPAR yes 118282074
chr1 43428742 43428748 HiNF-A TRANSFAC yes 28471124
chr1 43428742 43428748 HiNF-A TRANSFAC yes 118282075
chr1 43428754 43428769 STAT1 JASPAR yes 28471125
chr1 43428754 43428769 STAT1 JASPAR yes 118282076
chr1 43428756 43428767 STAT1 JASPAR yes 28471126
chr1 43428756 43428767 STAT3 JASPAR yes 28471127
chr1 43428756 43428767 STAT1 JASPAR yes 118282077
chr1 43428756 43428767 STAT3 JASPAR yes 118282078
chr1 43428759 43428766 ETS1 TRANSFAC yes 28471128
chr1 43428759 43428766 ETS1 TRANSFAC yes 118282079
chr1 43428760 43428768 EHF JASPAR yes 28471129
chr1 43428760 43428768 EHF JASPAR yes 118282080
chr1 43428802 43428814 FOXC2 JASPAR yes 28471130
chr1 43428802 43428814 FOXC2 JASPAR yes 118282081
chr1 43428803 43428814 FOXB1 JASPAR yes 28471131
chr1 43428803 43428814 FOXC1 JASPAR yes 28471132
chr1 43428803 43428814 FOXB1 JASPAR yes 118282082
chr1 43428803 43428814 FOXC1 JASPAR yes 118282083
chr1 43428804 43428812 FOXO3 JASPAR yes 28471133
chr1 43428804 43428812 FOXO3 JASPAR yes 118282084
chr1 43428804 43428815 FOXA1 JASPAR yes 28471134
chr1 43428804 43428815 FOXA1 JASPAR yes 118282085
chr1 43428814 43428828 POU1F1 JASPAR yes 28471135
chr1 43428814 43428828 POU1F1 JASPAR yes 118282086
chr1 43428815 43428827 POU3F2 JASPAR yes 28471136
chr1 43428815 43428827 POU3F2 JASPAR yes 118282087
chr1 43428821 43428834 ZBTB18 JASPAR yes 28471137
chr1 43428821 43428834 ZBTB18 JASPAR yes 118282088
chr1 43428835 43428845 FIGLA JASPAR yes 28471138
chr1 43428835 43428845 MSC JASPAR yes 28471139
chr1 43428835 43428845 TCF3 JASPAR yes 28471140
chr1 43428835 43428845 FIGLA JASPAR yes 118282089
chr1 43428835 43428845 MSC JASPAR yes 118282090
chr1 43428835 43428845 TCF3 JASPAR yes 118282091
chr1 43428836 43428845 SNAI2 JASPAR yes 28471141
chr1 43428836 43428845 SNAI2 JASPAR yes 118282092
chr1 43428837 43428842 USF2 TRANSFAC yes 28471142
chr1 43428837 43428842 USF2 TRANSFAC yes 118282093
chr1 43428870 43428878 GATA3 JASPAR yes 28471143
chr1 43428870 43428878 GATA3 JASPAR yes 118282094
chr1 43428884 43428898 RXRB JASPAR yes 28471144
chr1 43428884 43428898 RXRG JASPAR yes 28471145
chr1 43428884 43428898 RXRB JASPAR yes 118282095
chr1 43428884 43428898 RXRG JASPAR yes 118282096
chr1 43428884 43428899 NR2C2 JASPAR yes 28471146
chr1 43428884 43428899 NR2C2 JASPAR yes 118282097
chr1 43428921 43428931 FIGLA JASPAR yes 28471147
chr1 43428921 43428931 MSC JASPAR yes 28471148
chr1 43428921 43428931 TCF3 JASPAR yes 28471149
chr1 43428921 43428931 FIGLA JASPAR yes 118282098
chr1 43428921 43428931 MSC JASPAR yes 118282099
chr1 43428921 43428931 TCF3 JASPAR yes 118282100
chr1 43428922 43428931 SNAI2 JASPAR yes 28471150
chr1 43428922 43428931 SNAI2 JASPAR yes 118282101
chr1 43428923 43428928 USF2 TRANSFAC yes 28471151
chr1 43428923 43428928 USF2 TRANSFAC yes 118282102
chr1 43428947 43428952 MYB TRANSFAC yes 28471152
chr1 43428947 43428952 MYB TRANSFAC yes 118282103
chr1 43428956 43428977 ZNF263 JASPAR yes 28471153
chr1 43428956 43428977 ZNF263 JASPAR yes 118282104
chr1 43428959 43428980 ZNF263 JASPAR yes 28471154
chr1 43428959 43428980 ZNF263 JASPAR yes 118282105
chr1 43428963 43428969 SP1 TRANSFAC yes 28471155
chr1 43428963 43428969 SP1 TRANSFAC yes 118282106
chr1 43428964 43428985 ZNF263 JASPAR yes 28471156
chr1 43428964 43428985 ZNF263 JASPAR yes 118282107
chr1 43428995 43428999 NFE TRANSFAC yes 28471157
chr1 43428995 43428999 NFE TRANSFAC yes 118282108
chr1 43429008 43429019 SPDEF JASPAR yes 28471158
chr1 43429008 43429019 SPDEF JASPAR yes 118282109
chr1 43429010 43429017 PEA3 TRANSFAC yes 28471159
chr1 43429010 43429017 PEA3 TRANSFAC yes 118282110
chr1 43429036 43429040 H4TF2 TRANSFAC yes 28471160
chr1 43429036 43429040 H4TF2 TRANSFAC yes 118282111
chr1 43429039 43429060 ZNF263 JASPAR yes 28471161
chr1 43429039 43429060 ZNF263 JASPAR yes 118282112
chr1 43429049 43429069 TP63 JASPAR yes 28471162
chr1 43429049 43429069 TP63 JASPAR yes 118282113
chr1 43429061 43429079 RARA JASPAR yes 28471163
chr1 43429061 43429079 RARA JASPAR yes 118282114
chr1 43429066 43429076 POU6F2 JASPAR yes 28471164
chr1 43429066 43429076 POU6F2 JASPAR yes 118282115
chr1 43429067 43429077 MEOX1 JASPAR yes 28471165
chr1 43429067 43429077 MEOX1 JASPAR yes 118282116
chr1 43429070 43429074 YY1 TRANSFAC yes 28471166
chr1 43429070 43429074 YY1 TRANSFAC yes 118282117
chr1 43429085 43429096 FLI1 JASPAR yes 28471167
chr1 43429085 43429096 FLI1 JASPAR yes 118282118
chr1 43429086 43429096 GABPA JASPAR yes 28471168
chr1 43429086 43429096 GABPA JASPAR yes 118282119
chr1 43429086 43429099 ELF1 JASPAR yes 28471169
chr1 43429086 43429099 ELF1 JASPAR yes 118282120
chr1 43429087 43429095 EHF JASPAR yes 28471170
chr1 43429087 43429095 EHF JASPAR yes 118282121
chr1 43429092 43429096 NFE TRANSFAC yes 28471171
chr1 43429092 43429096 NFE TRANSFAC yes 118282122
chr1 43429095 43429101 MZF1 JASPAR yes 28471172
chr1 43429095 43429101 MZF1 JASPAR yes 118282123
chr1 43429105 43429111 HiNF-A TRANSFAC yes 28471173
chr1 43429105 43429111 HiNF-A TRANSFAC yes 118282124
SNP sites on vista1390[chr1:43428386-43429108]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 43428552 rs552749816 A G
POLR2A
269666
chr1 43428581 rs80184186 A G
POLR2A
269667
chr1 43428650 rs710217 A G
BATF JUN MAFF MAFG MAFK POLR2A
269668
chr1 43428685 rs75009191 C A,T
ETS1 NFKB1 POLR2A SPI1
269669
chr1 43428715 rs180840250 G A
CEBPA CEBPB POLR2A
269670
chr1 43428723 rs147217962 A G
POLR2A
269671
chr1 43428757 rs710216 A G
POLR2A STAT1 STAT3
269672
chr1 43428905 rs572979121 A G
POLR2A
269673
chr1 43428939 rs12038788 G A
POLR2A
269674
chr1 43428964 rs77841501 C G
POLR2A SP1 ZNF263
269675
chr1 43429105 rs710215 T C
HiNF-A POLR2A
269676
Genes possibly regulated by vista1390[chr1:43428386-43429108]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 43391052 43424530 - SLC2A1 ENSG00000117394.15 43424530 0.95 1.0 593 96144
Expression level of Genes
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miRNAs possibly regulated by vista1390[chr1:43428386-43429108]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results