EnhancerDB
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  3. vista1398[chr1:43533809-43534205]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1398[chr1:43533809-43534205]
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Tissue distribution of vista1398
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Transcription factor that possibly regulate vista1398[chr1:43533809-43534205]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 43533810 43533815 TFAP2A TRANSFAC yes 28484275
chr1 43533810 43533815 TFAP2A TRANSFAC yes 118282556
chr1 43533810 43533816 MZF1 JASPAR yes 28484276
chr1 43533810 43533816 MZF1 JASPAR yes 118282557
chr1 43533812 43533817 ETS2 TRANSFAC yes 28484277
chr1 43533812 43533817 ETS2 TRANSFAC yes 118282558
chr1 43533839 43533852 TFAP2A JASPAR yes 28484278
chr1 43533839 43533852 TFAP2B JASPAR yes 28484279
chr1 43533839 43533852 TFAP2C JASPAR yes 28484280
chr1 43533839 43533852 TFAP2A JASPAR yes 118282559
chr1 43533839 43533852 TFAP2B JASPAR yes 118282560
chr1 43533839 43533852 TFAP2C JASPAR yes 118282561
chr1 43533842 43533854 E2F8 JASPAR yes 28484281
chr1 43533842 43533854 E2F8 JASPAR yes 118282562
chr1 43533843 43533855 E2F8 JASPAR yes 28484282
chr1 43533843 43533855 E2F8 JASPAR yes 118282563
chr1 43533847 43533857 SP1 JASPAR yes 28484283
chr1 43533847 43533857 SP1 JASPAR yes 118282564
chr1 43533853 43533863 SP1 JASPAR yes 28484284
chr1 43533853 43533863 SP1 JASPAR yes 118282565
chr1 43533854 43533863 SP1 TRANSFAC yes 28484285
chr1 43533854 43533863 SP1 TRANSFAC yes 118282566
chr1 43533855 43533861 MAZ TRANSFAC yes 28484286
chr1 43533855 43533861 MAZ TRANSFAC yes 118282567
chr1 43533862 43533872 TFCP2 JASPAR yes 28484287
chr1 43533862 43533872 TFCP2 JASPAR yes 118282568
chr1 43533882 43533887 SP1 TRANSFAC yes 28484288
chr1 43533882 43533887 SP1 TRANSFAC yes 118282569
chr1 43533890 43533901 NRF1 JASPAR yes 28484289
chr1 43533890 43533901 NRF1 JASPAR yes 118282570
chr1 43533891 43533895 LFA1 TRANSFAC yes 28484290
chr1 43533891 43533895 LFA1 TRANSFAC yes 118282571
chr1 43533894 43533904 SP1 JASPAR yes 28484291
chr1 43533894 43533904 SP1 JASPAR yes 118282572
chr1 43533895 43533900 SP1 TRANSFAC yes 28484292
chr1 43533895 43533900 SP1 TRANSFAC yes 118282573
chr1 43533896 43533901 SP1 TRANSFAC yes 28484293
chr1 43533896 43533901 SP1 TRANSFAC yes 118282574
chr1 43533896 43533902 SP1 TRANSFAC yes 28484294
chr1 43533896 43533902 SP1 TRANSFAC yes 118282575
chr1 43533927 43533938 E2F1 JASPAR yes 28484295
chr1 43533927 43533938 E2F1 JASPAR yes 118282576
chr1 43533928 43533939 E2F4 JASPAR yes 28484296
chr1 43533928 43533939 E2F6 JASPAR yes 28484297
chr1 43533928 43533939 E2F4 JASPAR yes 118282577
chr1 43533928 43533939 E2F6 JASPAR yes 118282578
chr1 43533930 43533949 REST JASPAR yes 28484298
chr1 43533930 43533949 REST JASPAR yes 118282579
chr1 43533943 43533949 ETS1 JASPAR yes 28484299
chr1 43533943 43533949 SPI1 JASPAR yes 28484300
chr1 43533943 43533949 ETS1 JASPAR yes 118282580
chr1 43533943 43533949 SPI1 JASPAR yes 118282581
chr1 43533998 43534011 TFAP2A JASPAR yes 28484301
chr1 43533998 43534011 TFAP2B JASPAR yes 28484302
chr1 43533998 43534011 TFAP2C JASPAR yes 28484303
chr1 43533998 43534011 TFAP2A JASPAR yes 118282582
chr1 43533998 43534011 TFAP2B JASPAR yes 118282583
chr1 43533998 43534011 TFAP2C JASPAR yes 118282584
chr1 43533999 43534008 TFAP2A JASPAR yes 28484304
chr1 43533999 43534008 TFAP2A JASPAR yes 118282585
chr1 43534008 43534027 REST JASPAR yes 28484305
chr1 43534008 43534027 REST JASPAR yes 118282586
chr1 43534012 43534026 TLX1 JASPAR yes 28484306
chr1 43534012 43534026 TLX1 JASPAR yes 118282587
chr1 43534019 43534024 SP1 TRANSFAC yes 28484307
chr1 43534019 43534024 SP1 TRANSFAC yes 118282588
chr1 43534020 43534033 ELF1 JASPAR yes 28484308
chr1 43534020 43534033 ELF1 JASPAR yes 118282589
chr1 43534024 43534032 FEV JASPAR yes 28484309
chr1 43534024 43534032 FEV JASPAR yes 118282590
chr1 43534058 43534077 CTCF JASPAR yes 28484310
chr1 43534058 43534077 CTCF JASPAR yes 118282591
chr1 43534063 43534069 MAZ TRANSFAC yes 28484311
chr1 43534063 43534069 MAZ TRANSFAC yes 118282592
chr1 43534067 43534074 SP1 TRANSFAC yes 28484312
chr1 43534067 43534074 SP1 TRANSFAC yes 118282593
chr1 43534067 43534077 SP1 JASPAR yes 28484313
chr1 43534067 43534077 SP1 JASPAR yes 118282594
chr1 43534067 43534081 PLAG1 JASPAR yes 28484314
chr1 43534067 43534081 PLAG1 JASPAR yes 118282595
chr1 43534069 43534074 SP1 TRANSFAC yes 28484315
chr1 43534069 43534074 SP1 TRANSFAC yes 118282596
chr1 43534070 43534080 SP1 JASPAR yes 28484316
chr1 43534070 43534080 SP1 JASPAR yes 118282597
chr1 43534073 43534078 SP1 TRANSFAC yes 28484317
chr1 43534073 43534078 SP1 TRANSFAC yes 118282598
chr1 43534073 43534079 SP1 TRANSFAC yes 28484318
chr1 43534073 43534079 SP1 TRANSFAC yes 118282599
chr1 43534074 43534082 SP1 TRANSFAC yes 28484319
chr1 43534074 43534082 WT1 TRANSFAC yes 28484320
chr1 43534074 43534082 SP1 TRANSFAC yes 118282600
chr1 43534074 43534082 WT1 TRANSFAC yes 118282601
chr1 43534076 43534083 SP1 TRANSFAC yes 28484321
chr1 43534076 43534083 SP1 TRANSFAC yes 118282602
chr1 43534076 43534086 SP1 JASPAR yes 28484322
chr1 43534076 43534086 SP1 JASPAR yes 118282603
chr1 43534076 43534090 PLAG1 JASPAR yes 28484323
chr1 43534076 43534090 PLAG1 JASPAR yes 118282604
chr1 43534078 43534083 SP1 TRANSFAC yes 28484324
chr1 43534078 43534083 SP1 TRANSFAC yes 118282605
chr1 43534079 43534089 SP1 JASPAR yes 28484325
chr1 43534079 43534089 SP1 JASPAR yes 118282606
chr1 43534082 43534087 SP1 TRANSFAC yes 28484326
chr1 43534082 43534087 SP1 TRANSFAC yes 118282607
chr1 43534082 43534088 SP1 TRANSFAC yes 28484327
chr1 43534082 43534088 SP1 TRANSFAC yes 118282608
chr1 43534083 43534091 SP1 TRANSFAC yes 28484328
chr1 43534083 43534091 WT1 TRANSFAC yes 28484329
chr1 43534083 43534091 SP1 TRANSFAC yes 118282609
chr1 43534083 43534091 WT1 TRANSFAC yes 118282610
chr1 43534085 43534092 SP1 TRANSFAC yes 28484330
chr1 43534085 43534092 SP1 TRANSFAC yes 118282611
chr1 43534085 43534095 SP1 JASPAR yes 28484331
chr1 43534085 43534095 SP1 JASPAR yes 118282612
chr1 43534086 43534094 SP1 TRANSFAC yes 28484332
chr1 43534086 43534094 SP1 TRANSFAC yes 118282613
chr1 43534086 43534096 SP1 JASPAR yes 28484333
chr1 43534086 43534096 SP1 JASPAR yes 118282614
chr1 43534087 43534092 SP1 TRANSFAC yes 28484334
chr1 43534087 43534092 SP1 TRANSFAC yes 118282615
chr1 43534088 43534093 SP1 TRANSFAC yes 28484335
chr1 43534088 43534093 SP1 TRANSFAC yes 118282616
chr1 43534110 43534126 GLIS1 JASPAR yes 28484336
chr1 43534110 43534126 GLIS1 JASPAR yes 118282617
chr1 43534111 43534125 ZIC1 JASPAR yes 28484337
chr1 43534111 43534125 ZIC1 JASPAR yes 118282618
chr1 43534111 43534126 ZIC4 JASPAR yes 28484338
chr1 43534111 43534126 ZIC4 JASPAR yes 118282619
chr1 43534113 43534118 SP1 TRANSFAC yes 28484339
chr1 43534113 43534118 SP1 TRANSFAC yes 118282620
chr1 43534134 43534145 NRF1 JASPAR yes 28484340
chr1 43534134 43534145 NRF1 JASPAR yes 118282621
chr1 43534146 43534150 H4TF2 TRANSFAC yes 28484341
chr1 43534146 43534150 H4TF2 TRANSFAC yes 118282622
chr1 43534148 43534154 MZF1 JASPAR yes 28484342
chr1 43534148 43534154 MZF1 JASPAR yes 118282623
chr1 43534162 43534167 SP1 TRANSFAC yes 28484343
chr1 43534162 43534167 SP1 TRANSFAC yes 118282624
chr1 43534170 43534191 MAFG JASPAR yes 28484344
chr1 43534170 43534191 MAFG JASPAR yes 118282625
chr1 43534179 43534191 NHLH1 JASPAR yes 28484345
chr1 43534179 43534191 NHLH1 JASPAR yes 118282626
chr1 43534180 43534190 TFAP4 JASPAR yes 28484346
chr1 43534180 43534190 TFAP4 JASPAR yes 118282627
chr1 43534189 43534196 SPIB JASPAR yes 28484347
chr1 43534189 43534196 SPIB JASPAR yes 118282628
SNP sites on vista1398[chr1:43533809-43534205]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 43533924 rs114998424 A C no 271063
chr1 43533930 rs72962506 C A,T
E2F1 E2F4 E2F6 REST
271064
chr1 43533939 rs116251058 T C
E2F4 E2F6 REST
271065
chr1 43533985 rs548747168 G A,T no 271066
chr1 43534082 rs538301116 C T
PLAG1 SP1 WT1
271067
Genes possibly regulated by vista1398[chr1:43533809-43534205]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 43610824 43622067 + FAM183A ENSG00000186973.6 43610824 0.96 0.89 594 23381
Expression level of Genes
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miRNAs possibly regulated by vista1398[chr1:43533809-43534205]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results