EnhancerDB
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  3. vista1399[chr1:43653088-43653279]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1399[chr1:43653088-43653279]
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Tissue distribution of vista1399
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Transcription factor that possibly regulate vista1399[chr1:43653088-43653279]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 43653104 43653116 POU3F1 JASPAR yes 118282629
chr1 43653104 43653116 POU3F2 JASPAR yes 118282630
chr1 43653105 43653117 POU2F1 JASPAR yes 118282631
chr1 43653108 43653111 MYB TRANSFAC yes 118282632
chr1 43653129 43653133 H4TF2 TRANSFAC yes 118282633
chr1 43653143 43653146 MYB TRANSFAC yes 118282634
chr1 43653150 43653158 ISX JASPAR yes 118282635
chr1 43653150 43653158 LHX9 JASPAR yes 118282636
chr1 43653150 43653158 LMX1B JASPAR yes 118282637
chr1 43653150 43653158 PRRX1 JASPAR yes 118282638
chr1 43653150 43653158 RAX2 JASPAR yes 118282639
chr1 43653150 43653158 SHOX JASPAR yes 118282640
chr1 43653150 43653158 UNCX JASPAR yes 118282641
chr1 43653150 43653163 DUXA JASPAR yes 118282642
chr1 43653151 43653162 DUX4 JASPAR yes 118282643
chr1 43653151 43653162 PHOX2A JASPAR yes 118282644
chr1 43653151 43653162 PROP1 JASPAR yes 118282645
chr1 43653156 43653170 JUN JASPAR yes 118282646
chr1 43653160 43653171 FOS JASPAR yes 118282647
chr1 43653160 43653171 FOSL1 JASPAR yes 118282648
chr1 43653160 43653171 JUND JASPAR yes 118282649
chr1 43653161 43653175 JUN JASPAR yes 118282650
chr1 43653184 43653190 TCF1 TRANSFAC yes 118282651
chr1 43653190 43653199 SRY JASPAR yes 118282652
chr1 43653224 43653235 CEBPA JASPAR yes 118282653
chr1 43653224 43653236 DBP JASPAR yes 118282654
chr1 43653224 43653236 HLF JASPAR yes 118282655
chr1 43653224 43653236 TEF JASPAR yes 118282656
chr1 43653225 43653235 CEBPB JASPAR yes 118282657
chr1 43653225 43653235 CEBPD JASPAR yes 118282658
chr1 43653225 43653235 CEBPE JASPAR yes 118282659
chr1 43653225 43653235 CEBPG JASPAR yes 118282660
chr1 43653225 43653236 CEBPB JASPAR yes 118282661
chr1 43653233 43653243 BARHL2 JASPAR yes 118282662
chr1 43653235 43653239 YY1 TRANSFAC yes 118282663
chr1 43653258 43653272 GATA2 JASPAR yes 118282664
chr1 43653259 43653263 YY1 TRANSFAC yes 118282665
chr1 43653261 43653272 HOXA10 JASPAR yes 118282666
chr1 43653263 43653273 TBR1 JASPAR yes 118282667
chr1 43653263 43653274 TBX2 JASPAR yes 118282668
SNP sites on vista1399[chr1:43653088-43653279]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 43653117 rs532012222 C T
POU2F1
271609
chr1 43653134 rs138452405 C CT no 271610
chr1 43653184 rs12144765 A G
TCF1
271611
chr1 43653229 rs11811512 A G
CEBPA CEBPB CEBPD CEBPE CEBPG DBP HLF TEF
271612
chr1 43653249 rs568187258 C T no 271613
Genes possibly regulated by vista1399[chr1:43653088-43653279]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 43610824 43622067 + FAM183A ENSG00000186973.6 43610824 0.96 0.89 594 57736
chr1 43629846 43736607 - EBNA1BP2 ENSG00000117395.6 43736607 0.85 0.99 595 16672
chr1 43637820 43720029 + WDR65 ENSG00000243710.3 43637820 0.86 1.0 596 84732
chr1 43735665 43739673 + TMEM125 ENSG00000179178.6 43735665 0.89 1.0 597 17614
chr1 43747554 43751288 - C1orf210 ENSG00000253313.1 43751288 0.84 1.0 598 1991
Expression level of Genes
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miRNAs possibly regulated by vista1399[chr1:43653088-43653279]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results