EnhancerDB
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  3. vista13995[chr12:71039604-71039990]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista13995[chr12:71039604-71039990]
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Tissue distribution of vista13995
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Transcription factor that possibly regulate vista13995[chr12:71039604-71039990]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 71039613 71039930 GABPA UCSC Txn Factor no Conserved 108044182
chr12 71039615 71040171 TCF7L2 UCSC Txn Factor no Conserved 108044185
chr12 71039618 71039988 JUN UCSC Txn Factor no Conserved 108044188
chr12 71039641 71039897 GATA2 UCSC Txn Factor no Conserved 108044194
chr12 71039660 71040196 FOS UCSC Txn Factor no Conserved 108044199
chr12 71039661 71039981 JUND UCSC Txn Factor no Conserved 108044200
chr12 71039683 71039948 FOSL2 UCSC Txn Factor no Conserved 108044208
chr12 71039684 71039896 TEAD4 UCSC Txn Factor no Conserved 108044212
chr12 71039594 71039615 IRF1 JASPAR yes 82432452
chr12 71039594 71039615 IRF1 JASPAR yes 121785885
chr12 71039597 71039611 IRF7 JASPAR yes 82432453
chr12 71039597 71039611 IRF7 JASPAR yes 121785886
chr12 71039598 71039613 PRDM1 JASPAR yes 82432454
chr12 71039598 71039613 PRDM1 JASPAR yes 121785887
chr12 71039600 71039615 FOXP1 JASPAR yes 82432455
chr12 71039600 71039615 FOXP1 JASPAR yes 121785888
chr12 71039600 71039621 IRF1 JASPAR yes 82432456
chr12 71039600 71039621 IRF1 JASPAR yes 121785889
chr12 71039605 71039623 NR3C1 JASPAR yes 82432457
chr12 71039605 71039623 NR3C1 JASPAR yes 121785890
chr12 71039628 71039634 TCF4 TRANSFAC yes 82432458
chr12 71039628 71039634 TCF4 TRANSFAC yes 121785891
chr12 71039638 71039644 MAZ TRANSFAC yes 82432459
chr12 71039638 71039644 MAZ TRANSFAC yes 121785892
chr12 71039668 71039677 HIC2 JASPAR yes 82432460
chr12 71039668 71039677 HIC2 JASPAR yes 121785893
chr12 71039670 71039681 EBF1 JASPAR yes 82432461
chr12 71039670 71039681 EBF1 JASPAR yes 121785894
chr12 71039693 71039696 MYB TRANSFAC yes 82432462
chr12 71039693 71039696 MYB TRANSFAC yes 121785895
chr12 71039705 71039718 NR2F1 JASPAR yes 82432463
chr12 71039705 71039718 NR2F1 JASPAR yes 121785896
chr12 71039708 71039716 NR4A2 JASPAR yes 82432464
chr12 71039708 71039716 NR4A2 JASPAR yes 121785897
chr12 71039758 71039762 NFE TRANSFAC yes 82432465
chr12 71039758 71039762 NFE TRANSFAC yes 121785898
chr12 71039766 71039771 SP1 TRANSFAC yes 82432466
chr12 71039766 71039771 SP1 TRANSFAC yes 121785899
chr12 71039776 71039786 ERF JASPAR yes 82432467
chr12 71039776 71039786 ERG JASPAR yes 82432468
chr12 71039776 71039786 ETS1 JASPAR yes 82432469
chr12 71039776 71039786 ETV1 JASPAR yes 82432470
chr12 71039776 71039786 ETV5 JASPAR yes 82432471
chr12 71039776 71039786 FEV JASPAR yes 82432472
chr12 71039776 71039786 FLI1 JASPAR yes 82432473
chr12 71039776 71039786 ERF JASPAR yes 121785900
chr12 71039776 71039786 ERG JASPAR yes 121785901
chr12 71039776 71039786 ETS1 JASPAR yes 121785902
chr12 71039776 71039786 ETV1 JASPAR yes 121785903
chr12 71039776 71039786 ETV5 JASPAR yes 121785904
chr12 71039776 71039786 FEV JASPAR yes 121785905
chr12 71039776 71039786 FLI1 JASPAR yes 121785906
chr12 71039776 71039787 ETV2 JASPAR yes 82432474
chr12 71039776 71039787 ETV2 JASPAR yes 121785907
chr12 71039777 71039786 ELK4 JASPAR yes 82432475
chr12 71039777 71039786 ELK4 JASPAR yes 121785908
chr12 71039778 71039783 GATA2 JASPAR yes 82432476
chr12 71039778 71039783 GATA2 JASPAR yes 121785909
chr12 71039778 71039785 GATA1 TRANSFAC yes 82432477
chr12 71039778 71039785 GATA1 TRANSFAC yes 121785910
chr12 71039786 71039795 VENTX JASPAR yes 82432478
chr12 71039786 71039795 VENTX JASPAR yes 121785911
chr12 71039803 71039819 SOX8 JASPAR yes 82432479
chr12 71039803 71039819 SOX8 JASPAR yes 121785912
chr12 71039812 71039826 JUN JASPAR yes 82432480
chr12 71039812 71039826 JUN JASPAR yes 121785913
chr12 71039814 71039825 BATF JASPAR yes 82432481
chr12 71039814 71039825 BATF JASPAR yes 121785914
chr12 71039815 71039826 FOSL2 JASPAR yes 82432482
chr12 71039815 71039826 JUNB JASPAR yes 82432483
chr12 71039815 71039826 FOSL2 JASPAR yes 121785915
chr12 71039815 71039826 JUNB JASPAR yes 121785916
chr12 71039816 71039827 FOS JASPAR yes 82432484
chr12 71039816 71039827 FOSL1 JASPAR yes 82432485
chr12 71039816 71039827 JUND JASPAR yes 82432486
chr12 71039816 71039827 NFE2 JASPAR yes 82432487
chr12 71039816 71039827 FOS JASPAR yes 121785917
chr12 71039816 71039827 FOSL1 JASPAR yes 121785918
chr12 71039816 71039827 JUND JASPAR yes 121785919
chr12 71039816 71039827 NFE2 JASPAR yes 121785920
chr12 71039817 71039826 JDP2 JASPAR yes 82432488
chr12 71039817 71039826 JDP2 JASPAR yes 121785921
chr12 71039817 71039828 FOSL2 JASPAR yes 82432489
chr12 71039817 71039828 JUNB JASPAR yes 82432490
chr12 71039817 71039828 FOSL2 JASPAR yes 121785922
chr12 71039817 71039828 JUNB JASPAR yes 121785923
chr12 71039817 71039831 JUN JASPAR yes 82432491
chr12 71039817 71039831 JUN JASPAR yes 121785924
chr12 71039834 71039837 MYB TRANSFAC yes 82432492
chr12 71039834 71039837 MYB TRANSFAC yes 121785925
chr12 71039834 71039852 IRF2 JASPAR yes 82432493
chr12 71039834 71039852 IRF2 JASPAR yes 121785926
chr12 71039835 71039850 SOX21 JASPAR yes 82432494
chr12 71039835 71039850 SOX21 JASPAR yes 121785927
chr12 71039835 71039851 SOX4 JASPAR yes 82432495
chr12 71039835 71039851 SOX4 JASPAR yes 121785928
chr12 71039842 71039854 BHLHE23 JASPAR yes 82432496
chr12 71039842 71039854 BHLHE23 JASPAR yes 121785929
chr12 71039854 71039860 TCF4 TRANSFAC yes 82432497
chr12 71039854 71039860 TCF4 TRANSFAC yes 121785930
chr12 71039860 71039870 HOXA13 JASPAR yes 82432498
chr12 71039860 71039870 HOXB13 JASPAR yes 82432499
chr12 71039860 71039870 HOXD13 JASPAR yes 82432500
chr12 71039860 71039870 HOXA13 JASPAR yes 121785931
chr12 71039860 71039870 HOXB13 JASPAR yes 121785932
chr12 71039860 71039870 HOXD13 JASPAR yes 121785933
chr12 71039860 71039871 HOXA10 JASPAR yes 82432501
chr12 71039860 71039871 HOXA10 JASPAR yes 121785934
chr12 71039861 71039870 CDX1 JASPAR yes 82432502
chr12 71039861 71039870 CDX1 JASPAR yes 121785935
chr12 71039861 71039872 CDX2 JASPAR yes 82432503
chr12 71039861 71039872 CDX2 JASPAR yes 121785936
chr12 71039867 71039871 YY1 TRANSFAC yes 82432504
chr12 71039867 71039871 YY1 TRANSFAC yes 121785937
chr12 71039916 71039929 SCRT2 JASPAR yes 82432505
chr12 71039916 71039929 SCRT2 JASPAR yes 121785938
chr12 71039922 71039932 TBX21 JASPAR yes 82432506
chr12 71039922 71039932 TBX21 JASPAR yes 121785939
chr12 71039923 71039931 TBX5 JASPAR yes 82432507
chr12 71039923 71039931 TBX5 JASPAR yes 121785940
chr12 71039937 71039953 ZNF143 JASPAR yes 82432508
chr12 71039937 71039953 ZNF143 JASPAR yes 121785941
chr12 71039946 71039960 NR2F1 JASPAR yes 82432509
chr12 71039946 71039960 NR2F1 JASPAR yes 121785942
chr12 71039968 71039972 LFA1 TRANSFAC yes 82432510
chr12 71039968 71039972 LFA1 TRANSFAC yes 121785943
chr12 71039969 71039980 BATF JASPAR yes 82432511
chr12 71039969 71039980 BATF JASPAR yes 121785944
chr12 71039971 71039982 NFE2 JASPAR yes 82432512
chr12 71039971 71039982 NFE2 JASPAR yes 121785945
chr12 71039972 71039981 JDP2 JASPAR yes 82432513
chr12 71039972 71039981 JDP2 JASPAR yes 121785946
chr12 71039986 71040007 REST JASPAR yes 82432514
chr12 71039986 71040007 REST JASPAR yes 121785947
chr12 71039990 71039994 NFE TRANSFAC yes 82432515
chr12 71039990 71039994 NFE TRANSFAC yes 121785948
SNP sites on vista13995[chr12:71039604-71039990]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 71039606 rs200103973 G GA,GAA
FOXP1 IRF1 IRF7 NR3C1 PRDM1
2723261
chr12 71039606 rs34675980 G GA,GAA,GG
FOXP1 IRF1 IRF7 NR3C1 PRDM1
2723262
chr12 71039606 rs68172525 G GA
FOXP1 IRF1 IRF7 NR3C1 PRDM1
2723263
chr12 71039625 rs572246287 T C
GABPA JUN TCF7L2
2723264
chr12 71039673 rs61930335 C T
EBF1 FOS GABPA GATA2 HIC2 JUN JUND TCF7L2
2723265
chr12 71039751 rs111422743 A T
FOS FOSL2 GABPA GATA2 JUN JUND TCF7L2 TEAD4
2723266
chr12 71039768 rs189940902 C A
FOS FOSL2 GABPA GATA2 JUN JUND SP1 TCF7L2 TEAD4
2723267
chr12 71039783 rs544321772 C T
ELK4 ERF ERG ETS1 ETV1 ETV2 ETV5 FEV FLI1 FOS FOSL2 GABPA GATA1 GATA2 JUN JUND TCF7L2 TEAD4
2723268
chr12 71039967 rs17108509 T C
FOS JUN JUND TCF7L2
2723269
Genes possibly regulated by vista13995[chr12:71039604-71039990]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 70910630 71031220 - PTPRB ENSG00000127329.10 71031220 0.9 1.0 12331 91616
Expression level of Genes
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miRNAs possibly regulated by vista13995[chr12:71039604-71039990]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results