EnhancerDB
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  3. vista1402[chr1:43760174-43760222]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1402[chr1:43760174-43760222]
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Tissue distribution of vista1402
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Transcription factor that possibly regulate vista1402[chr1:43760174-43760222]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 43760177 43760189 HES7 JASPAR yes 28493063
chr1 43760177 43760189 HES7 JASPAR yes 118282685
chr1 43760190 43760196 SOX10 JASPAR yes 28493064
chr1 43760190 43760196 SOX10 JASPAR yes 118282686
chr1 43760194 43760205 CDX2 JASPAR yes 28493065
chr1 43760194 43760205 CDX2 JASPAR yes 118282687
chr1 43760195 43760206 HOXC11 JASPAR yes 28493066
chr1 43760195 43760206 HOXC13 JASPAR yes 28493067
chr1 43760195 43760206 HOXC11 JASPAR yes 118282688
chr1 43760195 43760206 HOXC13 JASPAR yes 118282689
chr1 43760196 43760205 CDX1 JASPAR yes 28493068
chr1 43760196 43760205 CDX1 JASPAR yes 118282690
chr1 43760196 43760206 HOXA13 JASPAR yes 28493069
chr1 43760196 43760206 HOXB13 JASPAR yes 28493070
chr1 43760196 43760206 HOXC10 JASPAR yes 28493071
chr1 43760196 43760206 HOXD11 JASPAR yes 28493072
chr1 43760196 43760206 HOXD13 JASPAR yes 28493073
chr1 43760196 43760206 HOXA13 JASPAR yes 118282691
chr1 43760196 43760206 HOXB13 JASPAR yes 118282692
chr1 43760196 43760206 HOXC10 JASPAR yes 118282693
chr1 43760196 43760206 HOXD11 JASPAR yes 118282694
chr1 43760196 43760206 HOXD13 JASPAR yes 118282695
chr1 43760212 43760224 POU2F1 JASPAR yes 28493074
chr1 43760212 43760224 POU2F1 JASPAR yes 118282696
chr1 43760212 43760225 POU3F3 JASPAR yes 28493075
chr1 43760212 43760225 POU3F3 JASPAR yes 118282697
chr1 43760212 43760226 POU1F1 JASPAR yes 28493076
chr1 43760212 43760226 POU1F1 JASPAR yes 118282698
chr1 43760213 43760225 POU3F1 JASPAR yes 28493077
chr1 43760213 43760225 POU3F2 JASPAR yes 28493078
chr1 43760213 43760225 POU3F1 JASPAR yes 118282699
chr1 43760213 43760225 POU3F2 JASPAR yes 118282700
chr1 43760214 43760223 POU3F4 JASPAR yes 28493079
chr1 43760214 43760223 POU3F4 JASPAR yes 118282701
chr1 43760217 43760225 FOXC1 JASPAR yes 28493080
chr1 43760217 43760225 FOXC1 JASPAR yes 118282702
SNP sites on vista1402[chr1:43760174-43760222]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 43760199 rs78002449 C T
CDX1 CDX2 HOXA13 HOXB13 HOXC10 HOXC11 HOXC13 HOXD11 HOXD13
272275
Genes possibly regulated by vista1402[chr1:43760174-43760222]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 43629846 43736607 - EBNA1BP2 ENSG00000117395.6 43736607 0.85 0.99 595 76433
chr1 43735665 43739673 + TMEM125 ENSG00000179178.6 43735665 0.89 1.0 597 75491
chr1 43747554 43751288 - C1orf210 ENSG00000253313.1 43751288 0.84 1.0 598 91114
chr1 43766664 43788779 + TIE1 ENSG00000066056.9 43766664 0.87 0.98 599 93558
chr1 43803478 43818443 + MPL ENSG00000117400.10 43803478 0.78 1.0 600 56744
chr1 43824626 43828874 + CDC20 ENSG00000117399.9 43824626 0.96 1.0 601 35596
chr1 43829068 43833696 - ELOVL1 ENSG00000066322.8 43833696 0.82 1.0 602 26526
chr1 43849588 43855479 - MED8 ENSG00000159479.12 43855479 0.49 0.99 603 4743
chr1 43855553 43918321 + SZT2 ENSG00000198198.9 43855553 0.62 1.0 604 4669
Expression level of Genes
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miRNAs possibly regulated by vista1402[chr1:43760174-43760222]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results