EnhancerDB
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  3. vista1406[chr1:43884019-43884040]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1406[chr1:43884019-43884040]
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Tissue distribution of vista1406
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Transcription factor that possibly regulate vista1406[chr1:43884019-43884040]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 43884028 43884035 MEIS1 JASPAR yes 118282791
chr1 43884028 43884036 MEIS2 JASPAR yes 118282792
chr1 43884028 43884036 MEIS3 JASPAR yes 118282793
SNP sites on vista1406[chr1:43884019-43884040]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 43884029 rs115735888 T G
MEIS1 MEIS2 MEIS3
272734
Genes possibly regulated by vista1406[chr1:43884019-43884040]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 43803478 43818443 + MPL ENSG00000117400.10 43803478 0.78 1.0 600 19459
chr1 43824626 43828874 + CDC20 ENSG00000117399.9 43824626 0.96 1.0 601 40607
chr1 43829068 43833696 - ELOVL1 ENSG00000066322.8 43833696 0.82 1.0 602 49677
chr1 43849588 43855479 - MED8 ENSG00000159479.12 43855479 0.49 0.99 603 71460
chr1 43855553 43918321 + SZT2 ENSG00000198198.9 43855553 0.62 1.0 604 71534
chr1 43916824 43919660 - HYI ENSG00000178922.12 43919660 0.8 1.0 605 64380
Expression level of Genes
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miRNAs possibly regulated by vista1406[chr1:43884019-43884040]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results