EnhancerDB
  1. Home
  2. Enhancers
  3. vista1416[chr1:44176533-44177122]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1416[chr1:44176533-44177122]
Back to top
Tissue distribution of vista1416
Back to top
Transcription factor that possibly regulate vista1416[chr1:44176533-44177122]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 44176544 44176554 HESX1 JASPAR yes 28511039
chr1 44176544 44176554 HESX1 JASPAR yes 118283221
chr1 44176546 44176557 PHOX2A JASPAR yes 28511040
chr1 44176546 44176557 PHOX2A JASPAR yes 118283222
chr1 44176577 44176581 TEAD2 TRANSFAC yes 28511041
chr1 44176577 44176581 TEAD2 TRANSFAC yes 118283223
chr1 44176587 44176602 MEF2A JASPAR yes 28511042
chr1 44176587 44176602 MEF2A JASPAR yes 118283224
chr1 44176588 44176603 MEF2C JASPAR yes 28511043
chr1 44176588 44176603 MEF2C JASPAR yes 118283225
chr1 44176591 44176595 YY1 TRANSFAC yes 28511044
chr1 44176591 44176595 YY1 TRANSFAC yes 118283226
chr1 44176607 44176611 NFE TRANSFAC yes 28511045
chr1 44176607 44176611 NFE TRANSFAC yes 118283227
chr1 44176608 44176625 RXRA JASPAR yes 28511046
chr1 44176608 44176625 RXRA JASPAR yes 118283228
chr1 44176627 44176633 LEF1 TRANSFAC yes 28511047
chr1 44176627 44176633 SOX10 JASPAR yes 28511048
chr1 44176627 44176633 LEF1 TRANSFAC yes 118283229
chr1 44176627 44176633 SOX10 JASPAR yes 118283230
chr1 44176644 44176654 NFIA JASPAR yes 28511049
chr1 44176644 44176654 NFIA JASPAR yes 118283231
chr1 44176646 44176652 NFIC JASPAR yes 28511050
chr1 44176646 44176652 NFIC JASPAR yes 118283232
chr1 44176656 44176660 YY1 TRANSFAC yes 28511051
chr1 44176656 44176660 YY1 TRANSFAC yes 118283233
chr1 44176662 44176677 MEF2C JASPAR yes 28511052
chr1 44176662 44176677 MEF2C JASPAR yes 118283234
chr1 44176664 44176669 MYB TRANSFAC yes 28511053
chr1 44176664 44176669 MYB TRANSFAC yes 118283235
chr1 44176678 44176684 JUN TRANSFAC yes 28511054
chr1 44176678 44176684 JUN TRANSFAC yes 118283236
chr1 44176683 44176695 YY1 JASPAR yes 28511055
chr1 44176683 44176695 YY1 JASPAR yes 118283237
chr1 44176708 44176713 GATA2 JASPAR yes 28511056
chr1 44176708 44176713 GATA2 JASPAR yes 118283238
chr1 44176709 44176721 FOXI1 JASPAR yes 28511057
chr1 44176709 44176721 FOXI1 JASPAR yes 118283239
chr1 44176719 44176733 FOXF2 JASPAR yes 28511058
chr1 44176719 44176733 FOXF2 JASPAR yes 118283240
chr1 44176720 44176728 FOXG1 JASPAR yes 28511059
chr1 44176720 44176728 FOXG1 JASPAR yes 118283241
chr1 44176721 44176736 HNF1A JASPAR yes 28511060
chr1 44176721 44176736 HNF1A JASPAR yes 118283242
chr1 44176722 44176734 HNF1B JASPAR yes 28511061
chr1 44176722 44176734 HNF1B JASPAR yes 118283243
chr1 44176722 44176735 HNF1B JASPAR yes 28511062
chr1 44176722 44176735 HNF1B JASPAR yes 118283244
chr1 44176726 44176736 HOXC10 JASPAR yes 28511063
chr1 44176726 44176736 HOXD11 JASPAR yes 28511064
chr1 44176726 44176736 HOXC10 JASPAR yes 118283245
chr1 44176726 44176736 HOXD11 JASPAR yes 118283246
chr1 44176728 44176732 YY1 TRANSFAC yes 28511065
chr1 44176728 44176732 YY1 TRANSFAC yes 118283247
chr1 44176730 44176744 ONECUT3 JASPAR yes 28511066
chr1 44176730 44176744 ONECUT3 JASPAR yes 118283248
chr1 44176734 44176749 FOXP1 JASPAR yes 28511067
chr1 44176734 44176749 MEF2C JASPAR yes 28511068
chr1 44176734 44176749 FOXP1 JASPAR yes 118283249
chr1 44176734 44176749 MEF2C JASPAR yes 118283250
chr1 44176735 44176750 MEF2A JASPAR yes 28511069
chr1 44176735 44176750 MEF2A JASPAR yes 118283251
chr1 44176736 44176748 FOXC2 JASPAR yes 28511070
chr1 44176736 44176748 MEF2A JASPAR yes 28511071
chr1 44176736 44176748 MEF2B JASPAR yes 28511072
chr1 44176736 44176748 MEF2D JASPAR yes 28511073
chr1 44176736 44176748 FOXC2 JASPAR yes 118283252
chr1 44176736 44176748 MEF2A JASPAR yes 118283253
chr1 44176736 44176748 MEF2B JASPAR yes 118283254
chr1 44176736 44176748 MEF2D JASPAR yes 118283255
chr1 44176737 44176747 MEF2A JASPAR yes 28511074
chr1 44176737 44176747 MEF2A JASPAR yes 118283256
chr1 44176738 44176742 TEAD2 TRANSFAC yes 28511075
chr1 44176738 44176742 TEAD2 TRANSFAC yes 118283257
chr1 44176738 44176743 TBP TRANSFAC yes 28511076
chr1 44176738 44176743 TBP TRANSFAC yes 118283258
chr1 44176738 44176744 TMF TRANSFAC yes 28511077
chr1 44176738 44176744 TMF TRANSFAC yes 118283259
chr1 44176747 44176759 FOXI1 JASPAR yes 28511078
chr1 44176747 44176759 FOXI1 JASPAR yes 118283260
chr1 44176748 44176762 FOXF2 JASPAR yes 28511079
chr1 44176748 44176762 FOXF2 JASPAR yes 118283261
chr1 44176749 44176757 FOXG1 JASPAR yes 28511080
chr1 44176749 44176757 FOXO3 JASPAR yes 28511081
chr1 44176749 44176757 FOXG1 JASPAR yes 118283262
chr1 44176749 44176757 FOXO3 JASPAR yes 118283263
chr1 44176759 44176777 NR3C1 JASPAR yes 28511082
chr1 44176759 44176777 NR3C1 JASPAR yes 118283264
chr1 44176781 44176796 FOXA1 JASPAR yes 28511083
chr1 44176781 44176796 FOXA1 JASPAR yes 118283265
chr1 44176783 44176795 FOXC2 JASPAR yes 28511084
chr1 44176783 44176795 FOXC2 JASPAR yes 118283266
chr1 44176784 44176795 FOXB1 JASPAR yes 28511085
chr1 44176784 44176795 FOXC1 JASPAR yes 28511086
chr1 44176784 44176795 FOXB1 JASPAR yes 118283267
chr1 44176784 44176795 FOXC1 JASPAR yes 118283268
chr1 44176794 44176800 GATA3 JASPAR yes 28511087
chr1 44176794 44176800 GATA3 JASPAR yes 118283269
chr1 44176801 44176811 GSC2 JASPAR yes 28511088
chr1 44176801 44176811 GSC JASPAR yes 28511089
chr1 44176801 44176811 GSC2 JASPAR yes 118283270
chr1 44176801 44176811 GSC JASPAR yes 118283271
chr1 44176802 44176811 PITX3 JASPAR yes 28511090
chr1 44176802 44176811 PITX3 JASPAR yes 118283272
chr1 44176817 44176820 MYB TRANSFAC yes 28511091
chr1 44176817 44176820 MYB TRANSFAC yes 118283273
chr1 44176838 44176850 HLF JASPAR yes 28511092
chr1 44176838 44176850 HLF JASPAR yes 118283274
chr1 44176845 44176848 MYB TRANSFAC yes 28511093
chr1 44176845 44176848 MYB TRANSFAC yes 118283275
chr1 44176873 44176887 CREB3 JASPAR yes 28511094
chr1 44176873 44176887 CREB3 JASPAR yes 118283276
chr1 44176874 44176888 XBP1 JASPAR yes 28511095
chr1 44176874 44176888 XBP1 JASPAR yes 118283277
chr1 44176876 44176881 ATF1 TRANSFAC yes 28511096
chr1 44176876 44176881 ATF1 TRANSFAC yes 118283278
chr1 44176885 44176905 TP63 JASPAR yes 28511097
chr1 44176885 44176905 TP63 JASPAR yes 118283279
chr1 44176896 44176907 ETV2 JASPAR yes 28511098
chr1 44176896 44176907 ETV2 JASPAR yes 118283280
chr1 44176914 44176926 HNF1B JASPAR yes 28511099
chr1 44176914 44176926 HNF1B JASPAR yes 118283281
chr1 44176948 44176960 SRF JASPAR yes 28511100
chr1 44176948 44176960 SRF JASPAR yes 118283282
chr1 44176965 44176977 YY1 JASPAR yes 28511101
chr1 44176965 44176977 YY1 JASPAR yes 118283283
chr1 44176970 44176974 YY1 TRANSFAC yes 28511102
chr1 44176970 44176974 YY1 TRANSFAC yes 118283284
chr1 44176974 44176987 DUXA JASPAR yes 28511103
chr1 44176974 44176987 DUXA JASPAR yes 118283285
chr1 44176988 44176994 GATA3 JASPAR yes 28511104
chr1 44176988 44176994 GATA3 JASPAR yes 118283286
chr1 44176995 44176999 ESR1 TRANSFAC yes 28511105
chr1 44176995 44176999 ESR1 TRANSFAC yes 118283287
chr1 44176996 44177005 NKX2-8 JASPAR yes 28511106
chr1 44176996 44177005 NKX2-8 JASPAR yes 118283288
chr1 44176996 44177006 NKX2-3 JASPAR yes 28511107
chr1 44176996 44177006 NKX2-3 JASPAR yes 118283289
chr1 44177010 44177024 TCF7L2 JASPAR yes 28511108
chr1 44177010 44177024 TCF7L2 JASPAR yes 118283290
chr1 44177015 44177036 IRF1 JASPAR yes 28511109
chr1 44177015 44177036 IRF1 JASPAR yes 118283291
chr1 44177024 44177028 NFE TRANSFAC yes 28511110
chr1 44177024 44177028 NFE TRANSFAC yes 118283292
chr1 44177035 44177047 HES5 JASPAR yes 28511111
chr1 44177035 44177047 HES7 JASPAR yes 28511112
chr1 44177035 44177047 PKNOX1 JASPAR yes 28511113
chr1 44177035 44177047 PKNOX2 JASPAR yes 28511114
chr1 44177035 44177047 TGIF1 JASPAR yes 28511115
chr1 44177035 44177047 TGIF2 JASPAR yes 28511116
chr1 44177035 44177047 HES5 JASPAR yes 118283293
chr1 44177035 44177047 HES7 JASPAR yes 118283294
chr1 44177035 44177047 PKNOX1 JASPAR yes 118283295
chr1 44177035 44177047 PKNOX2 JASPAR yes 118283296
chr1 44177035 44177047 TGIF1 JASPAR yes 118283297
chr1 44177035 44177047 TGIF2 JASPAR yes 118283298
chr1 44177042 44177063 IRF1 JASPAR yes 28511117
chr1 44177042 44177063 IRF1 JASPAR yes 118283299
chr1 44177044 44177059 PRDM1 JASPAR yes 28511118
chr1 44177044 44177059 PRDM1 JASPAR yes 118283300
chr1 44177055 44177068 POU2F2 JASPAR yes 28511119
chr1 44177055 44177068 POU2F2 JASPAR yes 118283301
chr1 44177055 44177073 NFYA JASPAR yes 28511120
chr1 44177055 44177073 NFYA JASPAR yes 118283302
chr1 44177057 44177061 YY1 TRANSFAC yes 28511121
chr1 44177057 44177061 YY1 TRANSFAC yes 118283303
chr1 44177058 44177074 NFYA JASPAR yes 28511122
chr1 44177058 44177074 NFYA JASPAR yes 118283304
chr1 44177061 44177076 NFYB JASPAR yes 28511123
chr1 44177061 44177076 NFYB JASPAR yes 118283305
chr1 44177076 44177091 ESR2 JASPAR yes 28511124
chr1 44177076 44177091 ESR2 JASPAR yes 118283306
chr1 44177094 44177097 MYB TRANSFAC yes 28511125
chr1 44177094 44177097 MYB TRANSFAC yes 118283307
chr1 44177111 44177127 SOX4 JASPAR yes 28511126
chr1 44177111 44177127 SOX4 JASPAR yes 118283308
chr1 44177112 44177127 SOX21 JASPAR yes 28511127
chr1 44177112 44177127 SOX21 JASPAR yes 118283309
SNP sites on vista1416[chr1:44176533-44177122]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 44176583 rs558363758 G A no 274355
chr1 44176778 rs543278682 G A no 274356
chr1 44176793 rs567636340 A G
FOXA1 FOXB1 FOXC1 FOXC2
274357
chr1 44176869 rs72884945 C T no 274358
chr1 44176881 rs77151807 G A
ATF1 CREB3 XBP1
274359
chr1 44176891 rs185498100 T C,G
TP63
274360
chr1 44177020 rs145987626 A G
IRF1 TCF7L2
274361
chr1 44177045 rs139886999 C T
HES5 HES7 IRF1 PKNOX1 PKNOX2 PRDM1 TGIF1 TGIF2
274362
chr1 44177085 rs143266893 T C
ESR2
274363
chr1 44177090 rs189669970 A T
ESR2
274364
Genes possibly regulated by vista1416[chr1:44176533-44177122]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 44115829 44171186 + KDM4A ENSG00000066135.8 44115829 0.66 1.0 607 39296
chr1 44171495 44396831 + ST3GAL3 ENSG00000126091.15 44171495 0.6 0.99 608 94962
Expression level of Genes
Back to top
miRNAs possibly regulated by vista1416[chr1:44176533-44177122]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results