EnhancerDB
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  3. vista1417[chr1:44230271-44230532]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1417[chr1:44230271-44230532]
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Tissue distribution of vista1417
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Transcription factor that possibly regulate vista1417[chr1:44230271-44230532]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 44230266 44230276 MZF1 JASPAR yes 28516289
chr1 44230266 44230276 MZF1 JASPAR yes 118283310
chr1 44230309 44230319 SREBF1 JASPAR yes 28516290
chr1 44230309 44230319 SREBF1 JASPAR yes 118283311
chr1 44230317 44230328 EBF1 JASPAR yes 28516291
chr1 44230317 44230328 EBF1 JASPAR yes 118283312
chr1 44230318 44230329 EBF1 JASPAR yes 28516292
chr1 44230318 44230329 EBF1 JASPAR yes 118283313
chr1 44230323 44230328 TFAP2A TRANSFAC yes 28516293
chr1 44230323 44230328 TFAP2A TRANSFAC yes 118283314
chr1 44230323 44230329 MZF1 JASPAR yes 28516294
chr1 44230323 44230329 MZF1 JASPAR yes 118283315
chr1 44230340 44230348 RHOXF1 JASPAR yes 28516295
chr1 44230340 44230348 RHOXF1 JASPAR yes 118283316
chr1 44230385 44230402 RXRA JASPAR yes 28516296
chr1 44230385 44230402 RXRA JASPAR yes 118283317
chr1 44230386 44230403 ESR1 JASPAR yes 28516297
chr1 44230386 44230403 ESR1 JASPAR yes 118283318
chr1 44230399 44230415 NFYA JASPAR yes 28516298
chr1 44230399 44230415 NFYA JASPAR yes 118283319
chr1 44230402 44230417 NFYB JASPAR yes 28516299
chr1 44230402 44230417 NFYB JASPAR yes 118283320
chr1 44230417 44230423 NFE2 TRANSFAC yes 28516300
chr1 44230417 44230423 NFE2 TRANSFAC yes 118283321
chr1 44230417 44230429 INSM1 JASPAR yes 28516301
chr1 44230417 44230429 INSM1 JASPAR yes 118283322
chr1 44230422 44230429 ETS1 TRANSFAC yes 28516302
chr1 44230422 44230429 ETS1 TRANSFAC yes 118283323
chr1 44230422 44230433 FLI1 JASPAR yes 28516303
chr1 44230422 44230433 FLI1 JASPAR yes 118283324
chr1 44230423 44230431 EHF JASPAR yes 28516304
chr1 44230423 44230431 EHF JASPAR yes 118283325
chr1 44230430 44230434 LFA1 TRANSFAC yes 28516305
chr1 44230430 44230434 LFA1 TRANSFAC yes 118283326
chr1 44230434 44230448 TLX1 JASPAR yes 28516306
chr1 44230434 44230448 TLX1 JASPAR yes 118283327
chr1 44230435 44230449 TLX1 JASPAR yes 28516307
chr1 44230435 44230449 TLX1 JASPAR yes 118283328
chr1 44230470 44230481 STAT1 JASPAR yes 28516308
chr1 44230470 44230481 STAT3 JASPAR yes 28516309
chr1 44230470 44230481 STAT1 JASPAR yes 118283329
chr1 44230470 44230481 STAT3 JASPAR yes 118283330
chr1 44230489 44230494 MYC TRANSFAC yes 28516310
chr1 44230489 44230494 MYC TRANSFAC yes 118283331
chr1 44230496 44230511 AR JASPAR yes 28516311
chr1 44230496 44230511 AR JASPAR yes 118283332
chr1 44230503 44230507 NFE TRANSFAC yes 28516312
chr1 44230503 44230507 NFE TRANSFAC yes 118283333
chr1 44230510 44230529 REST JASPAR yes 28516313
chr1 44230510 44230529 REST JASPAR yes 118283334
chr1 44230519 44230531 NHLH1 JASPAR yes 28516314
chr1 44230519 44230531 NHLH1 JASPAR yes 118283335
chr1 44230520 44230530 NHLH1 JASPAR yes 28516315
chr1 44230520 44230530 NHLH1 JASPAR yes 118283336
chr1 44230526 44230531 TFAP2A TRANSFAC yes 28516316
chr1 44230526 44230531 TFAP2A TRANSFAC yes 118283337
chr1 44230526 44230532 MZF1 JASPAR yes 28516317
chr1 44230526 44230532 MZF1 JASPAR yes 118283338
SNP sites on vista1417[chr1:44230271-44230532]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 44230287 rs181419050 G A no 274838
chr1 44230387 rs72886813 C G,T
ESR1 RXRA
274839
chr1 44230416 rs74070676 G C
NFYB
274840
Genes possibly regulated by vista1417[chr1:44230271-44230532]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 44171495 44396831 + ST3GAL3 ENSG00000126091.15 44171495 0.6 0.99 608 41224
Expression level of Genes
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miRNAs possibly regulated by vista1417[chr1:44230271-44230532]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results