EnhancerDB
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  3. vista1422[chr1:44302297-44302456]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1422[chr1:44302297-44302456]
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Tissue distribution of vista1422
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Transcription factor that possibly regulate vista1422[chr1:44302297-44302456]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 44302290 44302302 NHLH1 JASPAR yes 28522978
chr1 44302290 44302302 NHLH1 JASPAR yes 118283563
chr1 44302291 44302301 NHLH1 JASPAR yes 28522979
chr1 44302291 44302301 NHLH1 JASPAR yes 118283564
chr1 44302295 44302304 HIC2 JASPAR yes 28522980
chr1 44302295 44302304 HIC2 JASPAR yes 118283565
chr1 44302298 44302302 LFA1 TRANSFAC yes 28522981
chr1 44302298 44302302 LFA1 TRANSFAC yes 118283566
chr1 44302311 44302317 NFIC JASPAR yes 28522982
chr1 44302311 44302317 NFIC JASPAR yes 118283567
chr1 44302312 44302326 TLX1 JASPAR yes 28522983
chr1 44302312 44302326 TLX1 JASPAR yes 118283568
chr1 44302318 44302332 PLAG1 JASPAR yes 28522984
chr1 44302318 44302332 PLAG1 JASPAR yes 118283569
chr1 44302325 44302346 ZNF263 JASPAR yes 28522985
chr1 44302325 44302346 ZNF263 JASPAR yes 118283570
chr1 44302326 44302346 RREB1 JASPAR yes 28522986
chr1 44302326 44302346 RREB1 JASPAR yes 118283571
chr1 44302328 44302333 SP1 TRANSFAC yes 28522987
chr1 44302328 44302333 SP1 TRANSFAC yes 118283572
chr1 44302328 44302349 ZNF263 JASPAR yes 28522988
chr1 44302328 44302349 ZNF263 JASPAR yes 118283573
chr1 44302329 44302339 ZNF740 JASPAR yes 28522989
chr1 44302329 44302339 ZNF740 JASPAR yes 118283574
chr1 44302330 44302350 RREB1 JASPAR yes 28522990
chr1 44302330 44302350 RREB1 JASPAR yes 118283575
chr1 44302331 44302352 ZNF263 JASPAR yes 28522991
chr1 44302331 44302352 ZNF263 JASPAR yes 118283576
chr1 44302340 44302350 SP1 JASPAR yes 28522992
chr1 44302340 44302350 SP1 JASPAR yes 118283577
chr1 44302343 44302348 SP1 TRANSFAC yes 28522993
chr1 44302343 44302348 SP1 TRANSFAC yes 118283578
chr1 44302345 44302350 TFAP2A TRANSFAC yes 28522994
chr1 44302345 44302350 TFAP2A TRANSFAC yes 118283579
chr1 44302345 44302351 MZF1 JASPAR yes 28522995
chr1 44302345 44302351 MZF1 JASPAR yes 118283580
chr1 44302356 44302369 SMAD2 JASPAR yes 28522996
chr1 44302356 44302369 SMAD2 JASPAR yes 118283581
chr1 44302358 44302372 TLX1 JASPAR yes 28522997
chr1 44302358 44302372 TLX1 JASPAR yes 118283582
chr1 44302359 44302373 TLX1 JASPAR yes 28522998
chr1 44302359 44302373 TLX1 JASPAR yes 118283583
chr1 44302413 44302431 ESR1 JASPAR yes 28522999
chr1 44302413 44302431 ESR1 JASPAR yes 118283584
chr1 44302439 44302450 ETV2 JASPAR yes 28523000
chr1 44302439 44302450 SPDEF JASPAR yes 28523001
chr1 44302439 44302450 ETV2 JASPAR yes 118283585
chr1 44302439 44302450 SPDEF JASPAR yes 118283586
chr1 44302441 44302446 GATA2 JASPAR yes 28523002
chr1 44302441 44302446 GATA2 JASPAR yes 118283587
SNP sites on vista1422[chr1:44302297-44302456]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 44302312 rs72886898 T C
NFIC TLX1
275329
chr1 44302328 rs188034874 G A
PLAG1 RREB1 SP1 ZNF263
275330
chr1 44302446 rs535018481 C A
ETV2 GATA2 SPDEF
275331
Genes possibly regulated by vista1422[chr1:44302297-44302456]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 44398992 44402913 + ARTN ENSG00000117407.12 44398992 0.98 1.0 609 3464
Expression level of Genes
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miRNAs possibly regulated by vista1422[chr1:44302297-44302456]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results