EnhancerDB
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  3. vista1475[chr1:46111666-46112048]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1475[chr1:46111666-46112048]
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Tissue distribution of vista1475
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Transcription factor that possibly regulate vista1475[chr1:46111666-46112048]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 46111662 46111670 FOXO3 JASPAR yes 28610177
chr1 46111662 46111670 FOXO3 JASPAR yes 118285494
chr1 46111714 46111719 H4TF1 TRANSFAC yes 28610178
chr1 46111714 46111719 H4TF1 TRANSFAC yes 118285495
chr1 46111725 46111731 NFIC JASPAR yes 28610179
chr1 46111725 46111731 NFIC JASPAR yes 118285496
chr1 46111727 46111731 H1TF2 TRANSFAC yes 28610180
chr1 46111727 46111731 NFE TRANSFAC yes 28610181
chr1 46111727 46111731 SRF TRANSFAC yes 28610182
chr1 46111727 46111731 H1TF2 TRANSFAC yes 118285497
chr1 46111727 46111731 NFE TRANSFAC yes 118285498
chr1 46111727 46111731 SRF TRANSFAC yes 118285499
chr1 46111729 46111740 DMRT3 JASPAR yes 28610183
chr1 46111729 46111740 DMRT3 JASPAR yes 118285500
chr1 46111733 46111736 MYB TRANSFAC yes 28610184
chr1 46111733 46111736 MYB TRANSFAC yes 118285501
chr1 46111739 46111750 NFE2L2 JASPAR yes 28610185
chr1 46111739 46111750 NFE2L2 JASPAR yes 118285502
chr1 46111802 46111813 E2F6 JASPAR yes 28610186
chr1 46111802 46111813 E2F6 JASPAR yes 118285503
chr1 46111838 46111851 SCRT2 JASPAR yes 28610187
chr1 46111838 46111851 SCRT2 JASPAR yes 118285504
chr1 46111838 46111853 SCRT1 JASPAR yes 28610188
chr1 46111838 46111853 SCRT1 JASPAR yes 118285505
chr1 46111876 46111884 E2F1 JASPAR yes 28610189
chr1 46111876 46111884 E2F1 JASPAR yes 118285506
chr1 46111881 46111890 SOX9 JASPAR yes 28610190
chr1 46111881 46111890 SOX9 JASPAR yes 118285507
chr1 46111886 46111896 ELK1 JASPAR yes 28610191
chr1 46111886 46111896 ELK1 JASPAR yes 118285508
chr1 46111890 46111896 ETS1 JASPAR yes 28610192
chr1 46111890 46111896 ETS1 JASPAR yes 118285509
chr1 46111910 46111917 NKX3-1 JASPAR yes 28610193
chr1 46111910 46111917 NKX3-1 JASPAR yes 118285510
chr1 46111915 46111930 LEF1 JASPAR yes 28610194
chr1 46111915 46111930 LEF1 JASPAR yes 118285511
chr1 46111922 46111934 FOXI1 JASPAR yes 28610195
chr1 46111922 46111934 FOXI1 JASPAR yes 118285512
chr1 46111934 46111942 NR4A2 JASPAR yes 28610196
chr1 46111934 46111942 NR4A2 JASPAR yes 118285513
chr1 46111942 46111946 TEAD2 TRANSFAC yes 28610197
chr1 46111942 46111946 TEAD2 TRANSFAC yes 118285514
chr1 46111944 46111947 MYB TRANSFAC yes 28610198
chr1 46111944 46111947 MYB TRANSFAC yes 118285515
chr1 46111952 46111956 YY1 TRANSFAC yes 28610199
chr1 46111952 46111956 YY1 TRANSFAC yes 118285516
chr1 46111962 46111968 SOX10 JASPAR yes 28610200
chr1 46111962 46111968 SOX10 JASPAR yes 118285517
chr1 46111986 46111990 YY1 TRANSFAC yes 28610201
chr1 46111986 46111990 YY1 TRANSFAC yes 118285518
chr1 46111988 46112003 FOXP1 JASPAR yes 28610202
chr1 46111988 46112003 FOXP1 JASPAR yes 118285519
chr1 46111991 46112001 HOXA13 JASPAR yes 28610203
chr1 46111991 46112001 HOXA13 JASPAR yes 118285520
chr1 46111992 46112003 CDX2 JASPAR yes 28610204
chr1 46111992 46112003 CDX2 JASPAR yes 118285521
chr1 46112012 46112016 YY1 TRANSFAC yes 28610205
chr1 46112012 46112016 YY1 TRANSFAC yes 118285522
chr1 46112023 46112027 TEAD2 TRANSFAC yes 28610206
chr1 46112023 46112027 TEAD2 TRANSFAC yes 118285523
chr1 46112023 46112028 TBP TRANSFAC yes 28610207
chr1 46112023 46112028 TBP TRANSFAC yes 118285524
chr1 46112030 46112036 TCF4 TRANSFAC yes 28610208
chr1 46112030 46112036 TCF4 TRANSFAC yes 118285525
chr1 46112034 46112042 MEIS2 JASPAR yes 28610209
chr1 46112034 46112042 MEIS3 JASPAR yes 28610210
chr1 46112034 46112042 MEIS2 JASPAR yes 118285526
chr1 46112034 46112042 MEIS3 JASPAR yes 118285527
chr1 46112035 46112039 NFE TRANSFAC yes 28610211
chr1 46112035 46112039 NFE TRANSFAC yes 118285528
chr1 46112045 46112049 NFE TRANSFAC yes 28610212
chr1 46112045 46112049 NFE TRANSFAC yes 118285529
chr1 46112045 46112050 GATA1 TRANSFAC yes 28610213
chr1 46112045 46112050 GATA1 TRANSFAC yes 118285530
chr1 46112045 46112051 GATA3 JASPAR yes 28610214
chr1 46112045 46112051 GATA3 JASPAR yes 118285531
chr1 46112046 46112056 TFCP2 JASPAR yes 28610215
chr1 46112046 46112056 TFCP2 JASPAR yes 118285532
SNP sites on vista1475[chr1:46111666-46112048]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 46111742 rs117042460 C T
NFE2L2
284444
chr1 46111757 rs551316189 T C no 284445
chr1 46111759 rs116496794 G C no 284446
chr1 46111800 rs11211148 G A no 284447
chr1 46111819 rs190450867 G A,C no 284448
chr1 46111869 rs77194998 T C no 284449
chr1 46111944 rs374589925 A G
MYB TEAD2
284450
chr1 46112031 rs183063642 C G,T
TCF4
284451
Genes possibly regulated by vista1475[chr1:46111666-46112048]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 46016215 46035721 + AKR1A1 ENSG00000117448.9 46016215 0.76 1.0 640 4549
chr1 46049518 46084566 + NASP ENSG00000132780.12 46049518 0.84 0.99 641 37852
chr1 46085716 46089729 - CCDC17 ENSG00000159588.10 46089729 0.89 1.0 642 78063
chr1 46092976 46153785 - GPBP1L1 ENSG00000159592.6 46153785 0.63 0.99 643 58263
chr1 46152886 46160115 + TMEM69 ENSG00000159596.6 46152886 0.78 0.99 644 59162
Expression level of Genes
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miRNAs possibly regulated by vista1475[chr1:46111666-46112048]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results