EnhancerDB
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  3. vista1478[chr1:46528388-46528566]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1478[chr1:46528388-46528566]
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Tissue distribution of vista1478
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Transcription factor that possibly regulate vista1478[chr1:46528388-46528566]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 46528376 46528391 HSF1 JASPAR yes 28639774
chr1 46528376 46528391 HSF1 JASPAR yes 118285637
chr1 46528377 46528390 HSF1 JASPAR yes 28639775
chr1 46528377 46528390 HSF2 JASPAR yes 28639776
chr1 46528377 46528390 HSF4 JASPAR yes 28639777
chr1 46528377 46528390 HSF1 JASPAR yes 118285638
chr1 46528377 46528390 HSF2 JASPAR yes 118285639
chr1 46528377 46528390 HSF4 JASPAR yes 118285640
chr1 46528382 46528397 LEF1 JASPAR yes 28639778
chr1 46528382 46528397 LEF1 JASPAR yes 118285641
chr1 46528383 46528397 TCF7L2 JASPAR yes 28639779
chr1 46528383 46528397 TCF7L2 JASPAR yes 118285642
chr1 46528389 46528401 FOXI1 JASPAR yes 28639780
chr1 46528389 46528401 FOXI1 JASPAR yes 118285643
chr1 46528390 46528407 ZNF410 JASPAR yes 28639781
chr1 46528390 46528407 ZNF410 JASPAR yes 118285644
chr1 46528391 46528399 FOXG1 JASPAR yes 28639782
chr1 46528391 46528399 FOXG1 JASPAR yes 118285645
chr1 46528392 46528402 HOXA13 JASPAR yes 28639783
chr1 46528392 46528402 HOXB13 JASPAR yes 28639784
chr1 46528392 46528402 HOXD13 JASPAR yes 28639785
chr1 46528392 46528402 HOXA13 JASPAR yes 118285646
chr1 46528392 46528402 HOXB13 JASPAR yes 118285647
chr1 46528392 46528402 HOXD13 JASPAR yes 118285648
chr1 46528400 46528405 GATA2 JASPAR yes 28639786
chr1 46528400 46528405 GATA2 JASPAR yes 118285649
chr1 46528412 46528416 YY1 TRANSFAC yes 28639787
chr1 46528412 46528416 YY1 TRANSFAC yes 118285650
chr1 46528432 46528452 RREB1 JASPAR yes 28639788
chr1 46528432 46528452 RREB1 JASPAR yes 118285651
chr1 46528433 46528453 RREB1 JASPAR yes 28639789
chr1 46528433 46528453 RREB1 JASPAR yes 118285652
chr1 46528434 46528454 RREB1 JASPAR yes 28639790
chr1 46528434 46528454 RREB1 JASPAR yes 118285653
chr1 46528435 46528450 RUNX2 JASPAR yes 28639791
chr1 46528435 46528450 RUNX2 JASPAR yes 118285654
chr1 46528436 46528448 FOXI1 JASPAR yes 28639792
chr1 46528436 46528448 FOXI1 JASPAR yes 118285655
chr1 46528439 46528451 IRF1 JASPAR yes 28639793
chr1 46528439 46528451 IRF1 JASPAR yes 118285656
chr1 46528439 46528459 RREB1 JASPAR yes 28639794
chr1 46528439 46528459 RREB1 JASPAR yes 118285657
chr1 46528440 46528461 IRF1 JASPAR yes 28639795
chr1 46528440 46528461 IRF1 JASPAR yes 118285658
chr1 46528441 46528456 RUNX2 JASPAR yes 28639796
chr1 46528441 46528456 RUNX2 JASPAR yes 118285659
chr1 46528442 46528457 STAT2 JASPAR yes 28639797
chr1 46528442 46528457 STAT2 JASPAR yes 118285660
chr1 46528444 46528456 IRF1 JASPAR yes 28639798
chr1 46528444 46528456 IRF1 JASPAR yes 118285661
chr1 46528444 46528458 IRF7 JASPAR yes 28639799
chr1 46528444 46528458 IRF7 JASPAR yes 118285662
chr1 46528444 46528459 IRF9 JASPAR yes 28639800
chr1 46528444 46528459 IRF9 JASPAR yes 118285663
chr1 46528445 46528457 IRF1 JASPAR yes 28639801
chr1 46528445 46528457 IRF1 JASPAR yes 118285664
chr1 46528451 46528463 IRF1 JASPAR yes 28639802
chr1 46528451 46528463 IRF1 JASPAR yes 118285665
chr1 46528451 46528465 IRF7 JASPAR yes 28639803
chr1 46528451 46528465 IRF7 JASPAR yes 118285666
chr1 46528453 46528468 RUNX2 JASPAR yes 28639804
chr1 46528453 46528468 RUNX2 JASPAR yes 118285667
chr1 46528457 46528475 IRF2 JASPAR yes 28639805
chr1 46528457 46528475 IRF2 JASPAR yes 118285668
chr1 46528458 46528479 IRF1 JASPAR yes 28639806
chr1 46528458 46528479 IRF1 JASPAR yes 118285669
chr1 46528460 46528475 STAT2 JASPAR yes 28639807
chr1 46528460 46528475 STAT2 JASPAR yes 118285670
chr1 46528461 46528475 STAT1 JASPAR yes 28639808
chr1 46528461 46528475 STAT1 JASPAR yes 118285671
chr1 46528462 46528474 IRF1 JASPAR yes 28639809
chr1 46528462 46528474 IRF1 JASPAR yes 118285672
chr1 46528462 46528476 IRF7 JASPAR yes 28639810
chr1 46528462 46528476 IRF8 JASPAR yes 28639811
chr1 46528462 46528476 IRF7 JASPAR yes 118285673
chr1 46528462 46528476 IRF8 JASPAR yes 118285674
chr1 46528462 46528477 IRF9 JASPAR yes 28639812
chr1 46528462 46528477 IRF9 JASPAR yes 118285675
chr1 46528463 46528481 IRF2 JASPAR yes 28639813
chr1 46528463 46528481 IRF2 JASPAR yes 118285676
chr1 46528464 46528485 IRF1 JASPAR yes 28639814
chr1 46528464 46528485 IRF1 JASPAR yes 118285677
chr1 46528466 46528481 STAT2 JASPAR yes 28639815
chr1 46528466 46528481 STAT2 JASPAR yes 118285678
chr1 46528467 46528481 STAT1 JASPAR yes 28639816
chr1 46528467 46528481 STAT1 JASPAR yes 118285679
chr1 46528468 46528480 IRF1 JASPAR yes 28639817
chr1 46528468 46528480 IRF1 JASPAR yes 118285680
chr1 46528468 46528482 IRF7 JASPAR yes 28639818
chr1 46528468 46528482 IRF8 JASPAR yes 28639819
chr1 46528468 46528482 IRF7 JASPAR yes 118285681
chr1 46528468 46528482 IRF8 JASPAR yes 118285682
chr1 46528468 46528483 IRF9 JASPAR yes 28639820
chr1 46528468 46528483 IRF9 JASPAR yes 118285683
chr1 46528469 46528487 IRF2 JASPAR yes 28639821
chr1 46528469 46528487 IRF2 JASPAR yes 118285684
chr1 46528470 46528491 IRF1 JASPAR yes 28639822
chr1 46528470 46528491 IRF1 JASPAR yes 118285685
chr1 46528472 46528487 STAT2 JASPAR yes 28639823
chr1 46528472 46528487 STAT2 JASPAR yes 118285686
chr1 46528473 46528487 STAT1 JASPAR yes 28639824
chr1 46528473 46528487 STAT1 JASPAR yes 118285687
chr1 46528474 46528486 IRF1 JASPAR yes 28639825
chr1 46528474 46528486 IRF1 JASPAR yes 118285688
chr1 46528474 46528488 IRF7 JASPAR yes 28639826
chr1 46528474 46528488 IRF8 JASPAR yes 28639827
chr1 46528474 46528488 IRF7 JASPAR yes 118285689
chr1 46528474 46528488 IRF8 JASPAR yes 118285690
chr1 46528474 46528489 IRF9 JASPAR yes 28639828
chr1 46528474 46528489 IRF9 JASPAR yes 118285691
chr1 46528478 46528496 NFYA JASPAR yes 28639829
chr1 46528478 46528496 NFYA JASPAR yes 118285692
chr1 46528478 46528498 RREB1 JASPAR yes 28639830
chr1 46528478 46528498 RREB1 JASPAR yes 118285693
chr1 46528479 46528499 RREB1 JASPAR yes 28639831
chr1 46528479 46528499 RREB1 JASPAR yes 118285694
chr1 46528482 46528498 ZNF143 JASPAR yes 28639832
chr1 46528482 46528498 ZNF143 JASPAR yes 118285695
chr1 46528482 46528502 RREB1 JASPAR yes 28639833
chr1 46528482 46528502 RREB1 JASPAR yes 118285696
chr1 46528483 46528503 RREB1 JASPAR yes 28639834
chr1 46528483 46528503 RREB1 JASPAR yes 118285697
chr1 46528485 46528505 RREB1 JASPAR yes 28639835
chr1 46528485 46528505 RREB1 JASPAR yes 118285698
chr1 46528486 46528506 RREB1 JASPAR yes 28639836
chr1 46528486 46528506 RREB1 JASPAR yes 118285699
chr1 46528487 46528507 RREB1 JASPAR yes 28639837
chr1 46528487 46528507 RREB1 JASPAR yes 118285700
chr1 46528490 46528495 SP1 TRANSFAC yes 28639838
chr1 46528490 46528495 SP1 TRANSFAC yes 118285701
chr1 46528490 46528510 RREB1 JASPAR yes 28639839
chr1 46528490 46528510 RREB1 JASPAR yes 118285702
chr1 46528494 46528499 SP1 TRANSFAC yes 28639840
chr1 46528494 46528499 SP1 TRANSFAC yes 118285703
chr1 46528494 46528514 RREB1 JASPAR yes 28639841
chr1 46528494 46528514 RREB1 JASPAR yes 118285704
chr1 46528495 46528515 RREB1 JASPAR yes 28639842
chr1 46528495 46528515 RREB1 JASPAR yes 118285705
chr1 46528498 46528503 SP1 TRANSFAC yes 28639843
chr1 46528498 46528503 SP1 TRANSFAC yes 118285706
chr1 46528503 46528509 ZNF354C JASPAR yes 28639844
chr1 46528503 46528509 ZNF354C JASPAR yes 118285707
chr1 46528504 46528518 ONECUT3 JASPAR yes 28639845
chr1 46528504 46528518 ONECUT3 JASPAR yes 118285708
chr1 46528506 46528511 NFY TRANSFAC yes 28639846
chr1 46528506 46528511 NFY TRANSFAC yes 118285709
chr1 46528559 46528567 RHOXF1 JASPAR yes 28639847
chr1 46528559 46528567 RHOXF1 JASPAR yes 118285710
SNP sites on vista1478[chr1:46528388-46528566]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 46528474 rs187912068 C G,T
IRF1 IRF2 IRF7 IRF8 IRF9 STAT1 STAT2
286727
chr1 46528502 rs192218712 G A
RREB1 SP1
286728
chr1 46528510 rs530029343 T G
NFY ONECUT3 RREB1
286729
Genes possibly regulated by vista1478[chr1:46528388-46528566]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista1478[chr1:46528388-46528566]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results