EnhancerDB
  1. Home
  2. Enhancers
  3. vista1480[chr1:46573980-46574380]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1480[chr1:46573980-46574380]
Back to top
Tissue distribution of vista1480
Back to top
Transcription factor that possibly regulate vista1480[chr1:46573980-46574380]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 46574035 46574047 PBX1 JASPAR yes 118285751
chr1 46574051 46574062 FLI1 JASPAR yes 118285752
chr1 46574052 46574065 ELF1 JASPAR yes 118285753
chr1 46574052 46574066 SPI1 JASPAR yes 118285754
chr1 46574052 46574066 SPIC JASPAR yes 118285755
chr1 46574055 46574062 SPIB JASPAR yes 118285756
chr1 46574102 46574114 GRHL1 JASPAR yes 118285757
chr1 46574103 46574106 MYB TRANSFAC yes 118285758
chr1 46574132 46574146 IRF7 JASPAR yes 118285759
chr1 46574142 46574152 GSC2 JASPAR yes 118285760
chr1 46574143 46574151 OTX2 JASPAR yes 118285761
chr1 46574150 46574153 MYB TRANSFAC yes 118285762
chr1 46574162 46574166 NFE TRANSFAC yes 118285763
chr1 46574163 46574168 GATA2 JASPAR yes 118285764
chr1 46574180 46574186 ZNF354C JASPAR yes 118285765
chr1 46574183 46574195 TEAD1 JASPAR yes 118285766
chr1 46574197 46574210 NR2F1 JASPAR yes 118285767
chr1 46574198 46574216 RARA JASPAR yes 118285768
chr1 46574199 46574210 ESRRA JASPAR yes 118285769
chr1 46574200 46574208 NR4A2 JASPAR yes 118285770
chr1 46574201 46574211 RORA JASPAR yes 118285771
chr1 46574201 46574215 RXRB JASPAR yes 118285772
chr1 46574201 46574216 NR2C2 JASPAR yes 118285773
chr1 46574206 46574213 NFATC2 JASPAR yes 118285774
chr1 46574223 46574233 CUX1 JASPAR yes 118285775
chr1 46574224 46574233 SOX9 JASPAR yes 118285776
chr1 46574285 46574300 STAT1 JASPAR yes 118285777
chr1 46574287 46574298 STAT1 JASPAR yes 118285778
chr1 46574287 46574298 STAT3 JASPAR yes 118285779
chr1 46574305 46574320 JUND JASPAR yes 118285780
chr1 46574306 46574319 JUN JASPAR yes 118285781
chr1 46574307 46574315 CREB1 JASPAR yes 118285782
chr1 46574311 46574321 SREBF1 JASPAR yes 118285783
chr1 46574311 46574321 SREBF2 JASPAR yes 118285784
chr1 46574318 46574322 YY1 TRANSFAC yes 118285785
chr1 46574319 46574329 NFATC3 JASPAR yes 28644736
chr1 46574319 46574329 NFATC3 JASPAR yes 118285786
chr1 46574320 46574327 NFATC2 JASPAR yes 28644737
chr1 46574320 46574327 NFATC2 JASPAR yes 118285787
chr1 46574350 46574355 GATA2 JASPAR yes 28644738
chr1 46574350 46574355 GATA2 JASPAR yes 118285788
chr1 46574378 46574386 GATA3 JASPAR yes 28644739
chr1 46574378 46574386 GATA3 JASPAR yes 118285789
SNP sites on vista1480[chr1:46573980-46574380]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 46573989 rs532875638 C A no 287063
chr1 46574010 rs539144953 C T no 287064
chr1 46574015 rs785484 T C no 287065
chr1 46574279 rs76626310 C T no 287066
chr1 46574365 rs190307483 A G no 287067
Genes possibly regulated by vista1480[chr1:46573980-46574380]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 46505812 46642160 - PIK3R3 ENSG00000117461.10 46642160 0.72 0.88 647 32220
chr1 46640745 46651630 + TSPAN1 ENSG00000117472.5 46640745 0.91 1.0 648 33635
chr1 46669006 46686933 + LURAP1 ENSG00000171357.5 46669006 0.88 1.0 650 5374
Expression level of Genes
Back to top
miRNAs possibly regulated by vista1480[chr1:46573980-46574380]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results