EnhancerDB
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  3. vista14825[chr12:109036250-109036518]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista14825[chr12:109036250-109036518]
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Tissue distribution of vista14825
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Transcription factor that possibly regulate vista14825[chr12:109036250-109036518]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 109036251 109036259 HOXA5 JASPAR yes 82473522
chr12 109036251 109036259 HOXA5 JASPAR yes 123609650
chr12 109036259 109036280 ZNF263 JASPAR yes 82473523
chr12 109036259 109036280 ZNF263 JASPAR yes 123609651
chr12 109036269 109036279 SP1 JASPAR yes 82473524
chr12 109036269 109036279 SP1 JASPAR yes 123609652
chr12 109036334 109036354 RREB1 JASPAR yes 82473525
chr12 109036334 109036354 RREB1 JASPAR yes 123609653
chr12 109036337 109036357 RREB1 JASPAR yes 82473526
chr12 109036337 109036357 RREB1 JASPAR yes 123609654
chr12 109036338 109036358 RREB1 JASPAR yes 82473527
chr12 109036338 109036358 RREB1 JASPAR yes 123609655
chr12 109036339 109036359 RREB1 JASPAR yes 82473528
chr12 109036339 109036359 RREB1 JASPAR yes 123609656
chr12 109036341 109036351 SP1 JASPAR yes 82473529
chr12 109036341 109036351 ZNF740 JASPAR yes 82473530
chr12 109036341 109036351 SP1 JASPAR yes 123609657
chr12 109036341 109036351 ZNF740 JASPAR yes 123609658
chr12 109036341 109036361 RREB1 JASPAR yes 82473531
chr12 109036341 109036361 RREB1 JASPAR yes 123609659
chr12 109036342 109036352 ZNF740 JASPAR yes 82473532
chr12 109036342 109036352 ZNF740 JASPAR yes 123609660
chr12 109036342 109036362 RREB1 JASPAR yes 82473533
chr12 109036342 109036362 RREB1 JASPAR yes 123609661
chr12 109036343 109036353 SP1 JASPAR yes 82473534
chr12 109036343 109036353 ZNF740 JASPAR yes 82473535
chr12 109036343 109036353 SP1 JASPAR yes 123609662
chr12 109036343 109036353 ZNF740 JASPAR yes 123609663
chr12 109036343 109036363 RREB1 JASPAR yes 82473536
chr12 109036343 109036363 RREB1 JASPAR yes 123609664
chr12 109036343 109036364 ZNF263 JASPAR yes 82473537
chr12 109036343 109036364 ZNF263 JASPAR yes 123609665
chr12 109036344 109036354 SP1 JASPAR yes 82473538
chr12 109036344 109036354 ZNF740 JASPAR yes 82473539
chr12 109036344 109036354 SP1 JASPAR yes 123609666
chr12 109036344 109036354 ZNF740 JASPAR yes 123609667
chr12 109036344 109036364 RREB1 JASPAR yes 82473540
chr12 109036344 109036364 RREB1 JASPAR yes 123609668
chr12 109036345 109036355 SP1 JASPAR yes 82473541
chr12 109036345 109036355 ZNF740 JASPAR yes 82473542
chr12 109036345 109036355 SP1 JASPAR yes 123609669
chr12 109036345 109036355 ZNF740 JASPAR yes 123609670
chr12 109036345 109036365 RREB1 JASPAR yes 82473543
chr12 109036345 109036365 RREB1 JASPAR yes 123609671
chr12 109036345 109036366 ZNF263 JASPAR yes 82473544
chr12 109036345 109036366 ZNF263 JASPAR yes 123609672
chr12 109036346 109036356 ZNF740 JASPAR yes 82473545
chr12 109036346 109036356 ZNF740 JASPAR yes 123609673
chr12 109036346 109036366 RREB1 JASPAR yes 82473546
chr12 109036346 109036366 RREB1 JASPAR yes 123609674
chr12 109036347 109036367 RREB1 JASPAR yes 82473547
chr12 109036347 109036367 RREB1 JASPAR yes 123609675
chr12 109036348 109036368 RREB1 JASPAR yes 82473548
chr12 109036348 109036368 RREB1 JASPAR yes 123609676
chr12 109036349 109036369 RREB1 JASPAR yes 82473549
chr12 109036349 109036369 RREB1 JASPAR yes 123609677
chr12 109036352 109036367 RUNX2 JASPAR yes 82473550
chr12 109036352 109036367 RUNX2 JASPAR yes 123609678
chr12 109036366 109036380 RXRB JASPAR yes 82473551
chr12 109036366 109036380 RXRG JASPAR yes 82473552
chr12 109036366 109036380 RXRB JASPAR yes 123609679
chr12 109036366 109036380 RXRG JASPAR yes 123609680
chr12 109036388 109036392 YY1 TRANSFAC yes 82473553
chr12 109036388 109036392 YY1 TRANSFAC yes 123609681
chr12 109036425 109036437 PKNOX1 JASPAR yes 82473554
chr12 109036425 109036437 PKNOX2 JASPAR yes 82473555
chr12 109036425 109036437 TGIF1 JASPAR yes 82473556
chr12 109036425 109036437 TGIF2 JASPAR yes 82473557
chr12 109036425 109036437 PKNOX1 JASPAR yes 123609682
chr12 109036425 109036437 PKNOX2 JASPAR yes 123609683
chr12 109036425 109036437 TGIF1 JASPAR yes 123609684
chr12 109036425 109036437 TGIF2 JASPAR yes 123609685
chr12 109036426 109036436 MSC JASPAR yes 82473558
chr12 109036426 109036436 MYF6 JASPAR yes 82473559
chr12 109036426 109036436 MSC JASPAR yes 123609686
chr12 109036426 109036436 MYF6 JASPAR yes 123609687
chr12 109036433 109036439 YY1 JASPAR yes 82473560
chr12 109036433 109036439 YY1 JASPAR yes 123609688
chr12 109036444 109036454 TFAP4 JASPAR yes 82473561
chr12 109036444 109036454 TFAP4 JASPAR yes 123609689
chr12 109036461 109036464 MYB TRANSFAC yes 82473562
chr12 109036461 109036464 MYB TRANSFAC yes 123609690
chr12 109036464 109036468 YY1 TRANSFAC yes 82473563
chr12 109036464 109036468 YY1 TRANSFAC yes 123609691
chr12 109036464 109036477 EOMES JASPAR yes 82473564
chr12 109036464 109036477 EOMES JASPAR yes 123609692
chr12 109036466 109036476 TBR1 JASPAR yes 82473565
chr12 109036466 109036476 TBR1 JASPAR yes 123609693
chr12 109036466 109036477 TBX20 JASPAR yes 82473566
chr12 109036466 109036477 TBX2 JASPAR yes 82473567
chr12 109036466 109036477 TBX20 JASPAR yes 123609694
chr12 109036466 109036477 TBX2 JASPAR yes 123609695
chr12 109036466 109036480 XBP1 JASPAR yes 82473568
chr12 109036466 109036480 XBP1 JASPAR yes 123609696
chr12 109036467 109036477 TBX21 JASPAR yes 82473569
chr12 109036467 109036477 TBX21 JASPAR yes 123609697
chr12 109036468 109036476 MGA JASPAR yes 82473570
chr12 109036468 109036476 TBX1 JASPAR yes 82473571
chr12 109036468 109036476 MGA JASPAR yes 123609698
chr12 109036468 109036476 TBX1 JASPAR yes 123609699
chr12 109036472 109036477 ATF1 TRANSFAC yes 82473572
chr12 109036472 109036477 ATF1 TRANSFAC yes 123609700
chr12 109036484 109036498 SPI1 JASPAR yes 82473573
chr12 109036484 109036498 SPI1 JASPAR yes 123609701
chr12 109036493 109036505 NHLH1 JASPAR yes 82473574
chr12 109036493 109036505 NHLH1 JASPAR yes 123609702
chr12 109036494 109036504 NHLH1 JASPAR yes 82473575
chr12 109036494 109036504 NHLH1 JASPAR yes 123609703
chr12 109036499 109036511 NHLH1 JASPAR yes 82473576
chr12 109036499 109036511 NHLH1 JASPAR yes 123609704
SNP sites on vista14825[chr12:109036250-109036518]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 109036296 rs190260200 G A no 2889252
chr12 109036336 rs550821963 G T
RREB1
2889253
chr12 109036344 rs140695997 A AC
RREB1 SP1 ZNF263 ZNF740
2889254
chr12 109036346 rs201134254 C CA
RREB1 SP1 ZNF263 ZNF740
2889255
chr12 109036351 rs199902810 C CG
RREB1 SP1 ZNF263 ZNF740
2889256
chr12 109036359 rs1558801 A C
RREB1 RUNX2 ZNF263
2889257
chr12 109036367 rs142637631 A G
RREB1 RUNX2 RXRB RXRG
2889258
chr12 109036504 rs77619620 A G
NHLH1
2889259
Genes possibly regulated by vista14825[chr12:109036250-109036518]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 108916357 108955176 - SART3 ENSG00000075856.7 108955176 0.63 0.99 12498 18926
chr12 108956358 108963160 + ISCU ENSG00000136003.11 108956358 0.65 0.99 12499 20108
chr12 108983622 108992096 - TMEM119 ENSG00000183160.8 108992096 0.87 0.99 12500 55846
chr12 109015686 109027735 - SELPLG ENSG00000110876.8 109027735 0.9 0.97 12501 91485
chr12 109038885 109125372 - CORO1C ENSG00000110880.6 109125372 0.74 0.99 12502 11146
Expression level of Genes
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miRNAs possibly regulated by vista14825[chr12:109036250-109036518]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results