EnhancerDB
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  3. vista1489[chr1:46796624-46796901]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1489[chr1:46796624-46796901]
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Tissue distribution of vista1489
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Transcription factor that possibly regulate vista1489[chr1:46796624-46796901]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 46796628 46796647 PAX5 JASPAR yes 28656014
chr1 46796628 46796647 PAX5 JASPAR yes 118286099
chr1 46796636 46796640 NFE TRANSFAC yes 28656015
chr1 46796636 46796640 NFE TRANSFAC yes 118286100
chr1 46796668 46796678 SREBF1 JASPAR yes 28656016
chr1 46796668 46796678 SREBF1 JASPAR yes 118286101
chr1 46796683 46796692 SP1 TRANSFAC yes 28656017
chr1 46796683 46796692 SP1 TRANSFAC yes 118286102
chr1 46796684 46796692 SP1 TRANSFAC yes 28656018
chr1 46796684 46796692 SP1 TRANSFAC yes 118286103
chr1 46796684 46796694 SP1 JASPAR yes 28656019
chr1 46796684 46796694 SP1 JASPAR yes 118286104
chr1 46796705 46796726 ZNF263 JASPAR yes 28656020
chr1 46796705 46796726 ZNF263 JASPAR yes 118286105
chr1 46796708 46796729 ZNF263 JASPAR yes 28656021
chr1 46796708 46796729 ZNF263 JASPAR yes 118286106
chr1 46796723 46796729 MZF1 JASPAR yes 28656022
chr1 46796723 46796729 MZF1 JASPAR yes 118286107
chr1 46796727 46796739 NHLH1 JASPAR yes 28656023
chr1 46796727 46796739 NHLH1 JASPAR yes 118286108
chr1 46796728 46796738 NHLH1 JASPAR yes 28656024
chr1 46796728 46796738 NHLH1 JASPAR yes 118286109
chr1 46796736 46796751 SCRT1 JASPAR yes 28656025
chr1 46796736 46796751 SCRT1 JASPAR yes 118286110
chr1 46796740 46796749 SNAI2 JASPAR yes 28656026
chr1 46796740 46796749 SNAI2 JASPAR yes 118286111
chr1 46796740 46796750 ID4 JASPAR yes 28656027
chr1 46796740 46796750 TCF3 JASPAR yes 28656028
chr1 46796740 46796750 TCF4 JASPAR yes 28656029
chr1 46796740 46796750 ID4 JASPAR yes 118286112
chr1 46796740 46796750 TCF3 JASPAR yes 118286113
chr1 46796740 46796750 TCF4 JASPAR yes 118286114
chr1 46796745 46796758 SMAD2 JASPAR yes 28656030
chr1 46796745 46796758 SMAD2 JASPAR yes 118286115
chr1 46796754 46796764 SP1 JASPAR yes 28656031
chr1 46796754 46796764 SP1 JASPAR yes 118286116
chr1 46796757 46796762 SP1 TRANSFAC yes 28656032
chr1 46796757 46796762 SP1 TRANSFAC yes 118286117
chr1 46796768 46796783 FOXP1 JASPAR yes 28656033
chr1 46796768 46796783 FOXP1 JASPAR yes 118286118
chr1 46796769 46796784 FOXP1 JASPAR yes 28656034
chr1 46796769 46796784 FOXP1 JASPAR yes 118286119
chr1 46796770 46796785 FOXP1 JASPAR yes 28656035
chr1 46796770 46796785 FOXP1 JASPAR yes 118286120
chr1 46796771 46796786 MEF2C JASPAR yes 28656036
chr1 46796771 46796786 MEF2C JASPAR yes 118286121
chr1 46796778 46796793 MEF2A JASPAR yes 28656037
chr1 46796778 46796793 MEF2A JASPAR yes 118286122
chr1 46796779 46796794 MEF2C JASPAR yes 28656038
chr1 46796779 46796794 MEF2C JASPAR yes 118286123
chr1 46796780 46796792 MEF2A JASPAR yes 28656039
chr1 46796780 46796792 MEF2B JASPAR yes 28656040
chr1 46796780 46796792 MEF2D JASPAR yes 28656041
chr1 46796780 46796792 MEF2A JASPAR yes 118286124
chr1 46796780 46796792 MEF2B JASPAR yes 118286125
chr1 46796780 46796792 MEF2D JASPAR yes 118286126
chr1 46796782 46796786 YY1 TRANSFAC yes 28656042
chr1 46796782 46796786 YY1 TRANSFAC yes 118286127
chr1 46796797 46796810 NFKB1 JASPAR yes 28656043
chr1 46796797 46796810 NFKB2 JASPAR yes 28656044
chr1 46796797 46796810 NFKB1 JASPAR yes 118286128
chr1 46796797 46796810 NFKB2 JASPAR yes 118286129
chr1 46796805 46796810 MYC TRANSFAC yes 28656045
chr1 46796805 46796810 MYC TRANSFAC yes 118286130
chr1 46796832 46796845 NR2F1 JASPAR yes 28656046
chr1 46796832 46796845 NR2F1 JASPAR yes 118286131
chr1 46796834 46796845 ESRRA JASPAR yes 28656047
chr1 46796834 46796845 ESRRB JASPAR yes 28656048
chr1 46796834 46796845 ESRRA JASPAR yes 118286132
chr1 46796834 46796845 ESRRB JASPAR yes 118286133
chr1 46796835 46796843 NR4A2 JASPAR yes 28656049
chr1 46796835 46796843 NR4A2 JASPAR yes 118286134
chr1 46796836 46796846 RORA JASPAR yes 28656050
chr1 46796836 46796846 RORA JASPAR yes 118286135
chr1 46796848 46796853 SP1 TRANSFAC yes 28656051
chr1 46796848 46796853 SP1 TRANSFAC yes 118286136
chr1 46796851 46796865 PLAG1 JASPAR yes 28656052
chr1 46796851 46796865 PLAG1 JASPAR yes 118286137
chr1 46796893 46796898 MYC TRANSFAC yes 28656053
chr1 46796893 46796898 MYC TRANSFAC yes 118286138
SNP sites on vista1489[chr1:46796624-46796901]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 46796646 rs58378302 G A
PAX5
288144
chr1 46796663 rs59039340 T C no 288145
chr1 46796696 rs367782349 A G no 288146
chr1 46796703 rs60096663 T C no 288147
chr1 46796710 rs140142239 C A
ZNF263
288148
chr1 46796759 rs560291618 C T
SP1
288149
chr1 46796764 rs59921999 A G
SP1
288150
chr1 46796769 rs372354854 ATTT A
FOXP1
288151
chr1 46796829 rs193036822 C G,T no 288152
chr1 46796831 rs369635888 A T no 288153
chr1 46796888 rs12092425 T G no 288154
chr1 46796899 rs12092426 T C no 288155
Genes possibly regulated by vista1489[chr1:46796624-46796901]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 46713360 46744145 + RAD54L ENSG00000085999.7 46713360 0.94 0.99 651 16736
chr1 46726868 46769280 - LRRC41 ENSG00000132128.12 46769280 0.64 1.0 652 72656
chr1 46769303 46782448 + UQCRH ENSG00000173660.7 46769303 0.77 0.99 653 72679
chr1 46805849 46830824 + NSUN4 ENSG00000117481.6 46805849 0.68 1.0 654 91052
chr1 46859937 46879520 + FAAH ENSG00000117480.11 46859937 0.89 1.0 655 36964
Expression level of Genes
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miRNAs possibly regulated by vista1489[chr1:46796624-46796901]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results