EnhancerDB
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  3. vista1490[chr1:46902512-46902655]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1490[chr1:46902512-46902655]
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Tissue distribution of vista1490
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Transcription factor that possibly regulate vista1490[chr1:46902512-46902655]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 46902540 46902545 SP1 TRANSFAC yes 28659503
chr1 46902540 46902545 SP1 TRANSFAC yes 118286139
chr1 46902570 46902574 YY1 TRANSFAC yes 28659504
chr1 46902570 46902574 YY1 TRANSFAC yes 118286140
chr1 46902606 46902609 MYB TRANSFAC yes 28659505
chr1 46902606 46902609 MYB TRANSFAC yes 118286141
chr1 46902609 46902613 YY1 TRANSFAC yes 28659506
chr1 46902609 46902613 YY1 TRANSFAC yes 118286142
chr1 46902628 46902632 YY1 TRANSFAC yes 28659507
chr1 46902628 46902632 YY1 TRANSFAC yes 118286143
chr1 46902636 46902650 PAX6 JASPAR yes 28659508
chr1 46902636 46902650 PAX6 JASPAR yes 118286144
chr1 46902641 46902659 RARA JASPAR yes 28659509
chr1 46902641 46902659 RARA JASPAR yes 118286145
chr1 46902647 46902658 JUNB JASPAR yes 28659510
chr1 46902647 46902658 JUNB JASPAR yes 118286146
chr1 46902647 46902661 JUN JASPAR yes 28659511
chr1 46902647 46902661 JUN JASPAR yes 118286147
chr1 46902649 46902657 FOXC1 JASPAR yes 28659512
chr1 46902649 46902657 FOXC1 JASPAR yes 118286148
chr1 46902650 46902659 ZEB1 JASPAR yes 28659513
chr1 46902650 46902659 ZEB1 JASPAR yes 118286149
chr1 46902653 46902658 USF2 TRANSFAC yes 28659514
chr1 46902653 46902658 USF2 TRANSFAC yes 118286150
SNP sites on vista1490[chr1:46902512-46902655]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 46902635 rs78211738 A T no 288620
Genes possibly regulated by vista1490[chr1:46902512-46902655]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 46805849 46830824 + NSUN4 ENSG00000117481.6 46805849 0.68 1.0 654 3337
chr1 46859937 46879520 + FAAH ENSG00000117480.11 46859937 0.89 1.0 655 57425
chr1 46972668 46979898 + DMBX1 ENSG00000197587.6 46972668 0.95 1.0 656 29987
Expression level of Genes
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miRNAs possibly regulated by vista1490[chr1:46902512-46902655]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results