EnhancerDB
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  3. vista1503[chr1:47729037-47729382]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1503[chr1:47729037-47729382]
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Tissue distribution of vista1503
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Transcription factor that possibly regulate vista1503[chr1:47729037-47729382]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 47729061 47729071 HOXB13 JASPAR yes 118286545
chr1 47729061 47729071 HOXD13 JASPAR yes 118286546
chr1 47729061 47729072 HOXA10 JASPAR yes 118286547
chr1 47729062 47729072 ALX3 JASPAR yes 118286548
chr1 47729062 47729072 EMX1 JASPAR yes 118286549
chr1 47729062 47729072 EMX2 JASPAR yes 118286550
chr1 47729062 47729072 ESX1 JASPAR yes 118286551
chr1 47729062 47729072 GBX2 JASPAR yes 118286552
chr1 47729062 47729072 GSX1 JASPAR yes 118286553
chr1 47729062 47729072 GSX2 JASPAR yes 118286554
chr1 47729062 47729072 HESX1 JASPAR yes 118286555
chr1 47729062 47729072 HOXB2 JASPAR yes 118286556
chr1 47729062 47729072 HOXB3 JASPAR yes 118286557
chr1 47729062 47729072 LBX2 JASPAR yes 118286558
chr1 47729062 47729072 LHX2 JASPAR yes 118286559
chr1 47729062 47729072 LHX6 JASPAR yes 118286560
chr1 47729062 47729072 MEOX1 JASPAR yes 118286561
chr1 47729062 47729072 MEOX2 JASPAR yes 118286562
chr1 47729062 47729072 MIXL1 JASPAR yes 118286563
chr1 47729062 47729072 MNX1 JASPAR yes 118286564
chr1 47729062 47729072 NOTO JASPAR yes 118286565
chr1 47729062 47729072 RAX JASPAR yes 118286566
chr1 47729063 47729071 BSX JASPAR yes 118286567
chr1 47729063 47729071 DLX6 JASPAR yes 118286568
chr1 47729063 47729071 EN1 JASPAR yes 118286569
chr1 47729063 47729071 ISX JASPAR yes 118286570
chr1 47729063 47729071 LBX1 JASPAR yes 118286571
chr1 47729063 47729071 LHX9 JASPAR yes 118286572
chr1 47729063 47729071 LMX1A JASPAR yes 118286573
chr1 47729063 47729071 LMX1B JASPAR yes 118286574
chr1 47729063 47729071 NKX6-1 JASPAR yes 118286575
chr1 47729063 47729071 NKX6-2 JASPAR yes 118286576
chr1 47729063 47729071 PAX4 JASPAR yes 118286577
chr1 47729063 47729071 PDX1 JASPAR yes 118286578
chr1 47729063 47729071 PRRX1 JASPAR yes 118286579
chr1 47729063 47729071 RAX2 JASPAR yes 118286580
chr1 47729063 47729071 SHOX JASPAR yes 118286581
chr1 47729063 47729071 UNCX JASPAR yes 118286582
chr1 47729063 47729071 VAX1 JASPAR yes 118286583
chr1 47729063 47729071 VAX2 JASPAR yes 118286584
chr1 47729063 47729071 VSX1 JASPAR yes 118286585
chr1 47729063 47729071 VSX2 JASPAR yes 118286586
chr1 47729063 47729073 POU6F2 JASPAR yes 118286587
chr1 47729072 47729083 TBX2 JASPAR yes 118286588
chr1 47729072 47729085 EOMES JASPAR yes 118286589
chr1 47729073 47729081 MGA JASPAR yes 118286590
chr1 47729073 47729081 TBX15 JASPAR yes 118286591
chr1 47729073 47729081 TBX1 JASPAR yes 118286592
chr1 47729073 47729081 TBX4 JASPAR yes 118286593
chr1 47729073 47729081 TBX5 JASPAR yes 118286594
chr1 47729073 47729083 TBR1 JASPAR yes 118286595
chr1 47729086 47729096 ID4 JASPAR yes 118286596
chr1 47729086 47729096 TCF3 JASPAR yes 118286597
chr1 47729086 47729096 TCF4 JASPAR yes 118286598
chr1 47729087 47729096 SNAI2 JASPAR yes 118286599
chr1 47729088 47729093 USF2 TRANSFAC yes 118286600
chr1 47729110 47729131 ZNF263 JASPAR yes 118286601
chr1 47729165 47729183 RARA JASPAR yes 118286602
chr1 47729186 47729205 PAX5 JASPAR yes 118286603
chr1 47729207 47729211 YY1 TRANSFAC yes 118286604
chr1 47729213 47729217 TEAD2 TRANSFAC yes 118286605
chr1 47729213 47729234 IRF1 JASPAR yes 118286606
chr1 47729217 47729232 STAT2 JASPAR yes 118286607
chr1 47729218 47729239 IRF1 JASPAR yes 118286608
chr1 47729220 47729235 IRF9 JASPAR yes 118286609
chr1 47729221 47729235 IRF7 JASPAR yes 118286610
chr1 47729221 47729235 IRF8 JASPAR yes 118286611
chr1 47729223 47729235 IRF1 JASPAR yes 118286612
chr1 47729244 47729247 MYB TRANSFAC yes 118286613
chr1 47729256 47729260 TEAD2 TRANSFAC yes 118286614
chr1 47729256 47729261 TBP TRANSFAC yes 118286615
chr1 47729273 47729287 TCF7L2 JASPAR yes 118286616
chr1 47729280 47729283 MYB TRANSFAC yes 118286617
chr1 47729289 47729296 NKX3-1 JASPAR yes 118286618
chr1 47729293 47729303 MEF2A JASPAR yes 118286619
chr1 47729296 47729300 YY1 TRANSFAC yes 118286620
chr1 47729309 47729323 TCF7L2 JASPAR yes 118286621
chr1 47729314 47729331 BCL6B JASPAR yes 118286622
chr1 47729322 47729329 NFATC2 JASPAR yes 118286623
chr1 47729323 47729331 FOXO3 JASPAR yes 118286624
chr1 47729328 47729338 MSC JASPAR yes 118286625
chr1 47729329 47729342 SCRT2 JASPAR yes 118286626
chr1 47729334 47729345 FOXH1 JASPAR yes 118286627
chr1 47729338 47729343 H4TF1 TRANSFAC yes 118286628
chr1 47729354 47729360 YY1 JASPAR yes 118286629
chr1 47729357 47729373 SOX8 JASPAR yes 118286630
chr1 47729360 47729370 NFATC3 JASPAR yes 118286631
chr1 47729377 47729381 YY1 TRANSFAC yes 118286632
SNP sites on vista1503[chr1:47729037-47729382]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 47729223 rs542854451 C A
IRF1 IRF7 IRF8 IRF9 STAT2
291397
chr1 47729298 rs61782704 A G
MEF2A YY1
291398
Genes possibly regulated by vista1503[chr1:47729037-47729382]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 47649265 47656716 - PDZK1IP1 ENSG00000162366.3 47656716 0.98 0.99 668 27679
chr1 47681962 47697892 - TAL1 ENSG00000162367.7 47697892 0.88 1.0 669 68855
chr1 47715811 47779819 - STIL ENSG00000123473.11 47779819 0.9 0.99 670 49563
chr1 47799469 47844511 + CMPK1 ENSG00000162368.9 47799469 0.65 0.98 671 29913
Expression level of Genes
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miRNAs possibly regulated by vista1503[chr1:47729037-47729382]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results