EnhancerDB
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  3. vista1504[chr1:47800262-47800514]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1504[chr1:47800262-47800514]
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Tissue distribution of vista1504
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Transcription factor that possibly regulate vista1504[chr1:47800262-47800514]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 47798687 47800772 POLR2A UCSC Txn Factor no Conserved 107803102
chr1 47800264 47800268 NFE TRANSFAC yes 118286633
chr1 47800276 47800291 FOXP1 JASPAR yes 118286634
chr1 47800297 47800310 TFAP2A JASPAR yes 118286635
chr1 47800297 47800310 TFAP2B JASPAR yes 118286636
chr1 47800297 47800310 TFAP2C JASPAR yes 118286637
chr1 47800303 47800313 SP1 JASPAR yes 118286638
chr1 47800304 47800312 SP1 TRANSFAC yes 118286639
chr1 47800304 47800313 SP1 TRANSFAC yes 118286640
chr1 47800304 47800314 SP1 JASPAR yes 118286641
chr1 47800305 47800310 SP1 TRANSFAC yes 118286642
chr1 47800306 47800311 SP1 TRANSFAC yes 118286643
chr1 47800306 47800312 SP1 TRANSFAC yes 118286644
chr1 47800312 47800327 MEF2A JASPAR yes 118286645
chr1 47800313 47800328 MEF2C JASPAR yes 118286646
chr1 47800316 47800320 YY1 TRANSFAC yes 118286647
chr1 47800324 47800339 RUNX2 JASPAR yes 118286648
chr1 47800356 47800366 SP1 JASPAR yes 118286649
chr1 47800375 47800381 SP1 TRANSFAC yes 118286650
chr1 47800376 47800381 SP1 TRANSFAC yes 118286651
chr1 47800386 47800398 TFAP2A JASPAR yes 118286652
chr1 47800386 47800398 TFAP2B JASPAR yes 118286653
chr1 47800386 47800398 TFAP2C JASPAR yes 118286654
chr1 47800386 47800401 TFAP2A JASPAR yes 118286655
chr1 47800386 47800401 TFAP2C JASPAR yes 118286656
chr1 47800387 47800398 TFAP2A JASPAR yes 118286657
chr1 47800409 47800419 SP1 JASPAR yes 118286658
chr1 47800411 47800421 MZF1 JASPAR yes 118286659
chr1 47800414 47800419 TFAP2A TRANSFAC yes 118286660
chr1 47800414 47800420 MZF1 JASPAR yes 118286661
chr1 47800420 47800432 ELF4 JASPAR yes 118286662
chr1 47800447 47800465 RARA JASPAR yes 118286663
chr1 47800451 47800465 RXRB JASPAR yes 118286664
chr1 47800451 47800465 RXRG JASPAR yes 118286665
chr1 47800451 47800466 HNF4G JASPAR yes 118286666
chr1 47800467 47800473 NFIC JASPAR yes 118286667
chr1 47800489 47800493 ESR1 TRANSFAC yes 118286668
chr1 47800491 47800502 ELK4 JASPAR yes 118286669
chr1 47800491 47800502 FLI1 JASPAR yes 118286670
chr1 47800492 47800502 ELK1 JASPAR yes 118286671
chr1 47800492 47800502 ELK3 JASPAR yes 118286672
chr1 47800492 47800502 ERF JASPAR yes 118286673
chr1 47800492 47800502 ERG JASPAR yes 118286674
chr1 47800492 47800502 ETS1 JASPAR yes 118286675
chr1 47800492 47800502 ETV1 JASPAR yes 118286676
chr1 47800492 47800502 ETV3 JASPAR yes 118286677
chr1 47800492 47800502 ETV4 JASPAR yes 118286678
chr1 47800492 47800502 ETV6 JASPAR yes 118286679
chr1 47800492 47800502 FEV JASPAR yes 118286680
chr1 47800492 47800502 FLI1 JASPAR yes 118286681
chr1 47800492 47800502 GABPA JASPAR yes 118286682
chr1 47800492 47800503 ETV2 JASPAR yes 118286683
chr1 47800492 47800504 ELF1 JASPAR yes 118286684
chr1 47800492 47800504 ELF4 JASPAR yes 118286685
chr1 47800492 47800505 ELF1 JASPAR yes 118286686
chr1 47800493 47800500 SPI1 JASPAR yes 118286687
chr1 47800493 47800501 EHF JASPAR yes 118286688
chr1 47800493 47800501 FEV JASPAR yes 118286689
chr1 47800498 47800502 NFE TRANSFAC yes 118286690
chr1 47800498 47800511 SMAD2 JASPAR yes 118286691
SNP sites on vista1504[chr1:47800262-47800514]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 47800311 rs142913116 G A
POLR2A SP1
291742
chr1 47800360 rs147421999 C G
POLR2A SP1
291743
chr1 47800409 rs553594325 C G
POLR2A SP1
291744
chr1 47800472 rs566935747 A C
NFIC POLR2A
291745
chr1 47800478 rs116403805 C A,G,T
POLR2A
291746
Genes possibly regulated by vista1504[chr1:47800262-47800514]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 47715811 47779819 - STIL ENSG00000123473.11 47779819 0.9 0.99 670 79557
chr1 47799469 47844511 + CMPK1 ENSG00000162368.9 47799469 0.65 0.98 671 99207
chr1 47881744 47883723 + FOXE3 ENSG00000186790.4 47881744 0.93 1.0 672 18770
Expression level of Genes
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miRNAs possibly regulated by vista1504[chr1:47800262-47800514]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results