EnhancerDB
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  3. vista15115[chr12:120672500-120673016]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista15115[chr12:120672500-120673016]
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Tissue distribution of vista15115
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Transcription factor that possibly regulate vista15115[chr12:120672500-120673016]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 120672361 120672905 EP300 UCSC Txn Factor no Conserved 108063323
chr12 120672444 120672991 ZNF263 UCSC Txn Factor no Conserved 108063329
chr12 120672449 120672874 CTCF UCSC Txn Factor no Conserved 108063331
chr12 120672474 120672944 GATA3 UCSC Txn Factor no Conserved 108063333
chr12 120672540 120672821 SMC3 UCSC Txn Factor no Conserved 108063345
chr12 120672571 120672759 FOXA1 UCSC Txn Factor no Conserved 108063358
chr12 120672544 120672555 JUNB JASPAR yes 82487434
chr12 120672544 120672555 JUNB JASPAR yes 124157082
chr12 120672545 120672556 FOSL1 JASPAR yes 82487435
chr12 120672545 120672556 JUND JASPAR yes 82487436
chr12 120672545 120672556 FOSL1 JASPAR yes 124157083
chr12 120672545 120672556 JUND JASPAR yes 124157084
chr12 120672547 120672553 JUN TRANSFAC yes 82487437
chr12 120672547 120672553 JUN TRANSFAC yes 124157085
chr12 120672554 120672575 IRF1 JASPAR yes 82487438
chr12 120672554 120672575 IRF1 JASPAR yes 124157086
chr12 120672558 120672573 PRDM1 JASPAR yes 82487439
chr12 120672558 120672573 PRDM1 JASPAR yes 124157087
chr12 120672560 120672581 IRF1 JASPAR yes 82487440
chr12 120672560 120672581 IRF1 JASPAR yes 124157088
chr12 120672562 120672572 TEAD1 JASPAR yes 82487441
chr12 120672562 120672572 TEAD4 JASPAR yes 82487442
chr12 120672562 120672572 TEAD1 JASPAR yes 124157089
chr12 120672562 120672572 TEAD4 JASPAR yes 124157090
chr12 120672567 120672580 SMAD2 JASPAR yes 82487443
chr12 120672567 120672580 SMAD2 JASPAR yes 124157091
chr12 120672575 120672581 YY1 JASPAR yes 82487444
chr12 120672575 120672581 YY1 JASPAR yes 124157092
chr12 120672591 120672596 GATA2 JASPAR yes 82487445
chr12 120672591 120672596 GATA2 JASPAR yes 124157093
chr12 120672647 120672653 ZNF354C JASPAR yes 82487446
chr12 120672647 120672653 ZNF354C JASPAR yes 124157094
chr12 120672657 120672670 POU2F2 JASPAR yes 82487447
chr12 120672657 120672670 POU2F2 JASPAR yes 124157095
chr12 120672676 120672695 CTCF JASPAR yes 82487448
chr12 120672676 120672695 CTCF JASPAR yes 124157096
chr12 120672685 120672695 SP1 JASPAR yes 82487449
chr12 120672685 120672695 SP1 JASPAR yes 124157097
chr12 120672688 120672709 ZNF263 JASPAR yes 82487450
chr12 120672688 120672709 ZNF263 JASPAR yes 124157098
chr12 120672694 120672715 REST JASPAR yes 82487451
chr12 120672694 120672715 REST JASPAR yes 124157099
chr12 120672714 120672730 ZNF143 JASPAR yes 82487452
chr12 120672714 120672730 ZNF143 JASPAR yes 124157100
chr12 120672732 120672740 MEIS3 JASPAR yes 82487453
chr12 120672732 120672740 MEIS3 JASPAR yes 124157101
chr12 120672747 120672750 MYB TRANSFAC yes 82487454
chr12 120672747 120672750 MYB TRANSFAC yes 124157102
chr12 120672765 120672783 RARA JASPAR yes 82487455
chr12 120672765 120672783 RARA JASPAR yes 124157103
chr12 120672768 120672783 RUNX2 JASPAR yes 82487456
chr12 120672768 120672783 RUNX2 JASPAR yes 124157104
chr12 120672772 120672785 NR2F1 JASPAR yes 82487457
chr12 120672772 120672785 NR2F1 JASPAR yes 124157105
chr12 120672774 120672789 JUND JASPAR yes 82487458
chr12 120672774 120672789 JUND JASPAR yes 124157106
chr12 120672775 120672788 JUN JASPAR yes 82487459
chr12 120672775 120672788 JUN JASPAR yes 124157107
chr12 120672776 120672784 CREB1 JASPAR yes 82487460
chr12 120672776 120672784 CREB1 JASPAR yes 124157108
chr12 120672786 120672792 SOX10 JASPAR yes 82487461
chr12 120672786 120672792 SOX10 JASPAR yes 124157109
chr12 120672825 120672837 NHLH1 JASPAR yes 82487462
chr12 120672825 120672837 NHLH1 JASPAR yes 124157110
chr12 120672826 120672836 TFAP4 JASPAR yes 82487463
chr12 120672826 120672836 TFAP4 JASPAR yes 124157111
chr12 120672878 120672889 E2F6 JASPAR yes 82487464
chr12 120672878 120672889 E2F6 JASPAR yes 124157112
chr12 120672882 120672887 ETS2 TRANSFAC yes 82487465
chr12 120672882 120672887 ETS2 TRANSFAC yes 124157113
chr12 120672900 120672920 RREB1 JASPAR yes 82487466
chr12 120672900 120672920 RREB1 JASPAR yes 124157114
chr12 120672905 120672925 RREB1 JASPAR yes 82487467
chr12 120672905 120672925 RREB1 JASPAR yes 124157115
chr12 120672906 120672927 ZNF263 JASPAR yes 82487468
chr12 120672906 120672927 ZNF263 JASPAR yes 124157116
chr12 120672907 120672917 ZNF740 JASPAR yes 82487469
chr12 120672907 120672917 ZNF740 JASPAR yes 124157117
chr12 120672911 120672931 RREB1 JASPAR yes 82487470
chr12 120672911 120672931 RREB1 JASPAR yes 124157118
chr12 120672929 120672944 STAT1 JASPAR yes 82487471
chr12 120672929 120672944 STAT1 JASPAR yes 124157119
chr12 120672931 120672942 STAT1 JASPAR yes 82487472
chr12 120672931 120672942 STAT3 JASPAR yes 82487473
chr12 120672931 120672942 STAT1 JASPAR yes 124157120
chr12 120672931 120672942 STAT3 JASPAR yes 124157121
chr12 120672936 120672941 ETS2 TRANSFAC yes 82487474
chr12 120672936 120672941 ETS2 TRANSFAC yes 124157122
chr12 120672942 120672954 PKNOX1 JASPAR yes 82487475
chr12 120672942 120672954 PKNOX2 JASPAR yes 82487476
chr12 120672942 120672954 TGIF1 JASPAR yes 82487477
chr12 120672942 120672954 TGIF2 JASPAR yes 82487478
chr12 120672942 120672954 PKNOX1 JASPAR yes 124157123
chr12 120672942 120672954 PKNOX2 JASPAR yes 124157124
chr12 120672942 120672954 TGIF1 JASPAR yes 124157125
chr12 120672942 120672954 TGIF2 JASPAR yes 124157126
chr12 120672942 120672955 ZBTB18 JASPAR yes 82487479
chr12 120672942 120672955 ZBTB18 JASPAR yes 124157127
chr12 120672942 120672958 T JASPAR yes 82487480
chr12 120672942 120672958 T JASPAR yes 124157128
chr12 120672943 120672953 MSC JASPAR yes 82487481
chr12 120672943 120672953 MYF6 JASPAR yes 82487482
chr12 120672943 120672953 NHLH1 JASPAR yes 82487483
chr12 120672943 120672953 TFAP4 JASPAR yes 82487484
chr12 120672943 120672953 MSC JASPAR yes 124157129
chr12 120672943 120672953 MYF6 JASPAR yes 124157130
chr12 120672943 120672953 NHLH1 JASPAR yes 124157131
chr12 120672943 120672953 TFAP4 JASPAR yes 124157132
chr12 120672948 120672952 NFE TRANSFAC yes 82487485
chr12 120672948 120672952 NFE TRANSFAC yes 124157133
chr12 120672956 120672971 RUNX2 JASPAR yes 82487486
chr12 120672956 120672971 RUNX2 JASPAR yes 124157134
chr12 120672964 120672978 TCF7L2 JASPAR yes 82487487
chr12 120672964 120672978 TCF7L2 JASPAR yes 124157135
chr12 120672970 120672984 NR2F1 JASPAR yes 82487488
chr12 120672970 120672984 NR2F1 JASPAR yes 124157136
chr12 120672984 120672993 SOX9 JASPAR yes 82487489
chr12 120672984 120672993 SOX9 JASPAR yes 124157137
chr12 120672993 120672998 ETS2 TRANSFAC yes 82487490
chr12 120672993 120672998 ETS2 TRANSFAC yes 124157138
SNP sites on vista15115[chr12:120672500-120673016]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 120672520 rs146692571 G A
CTCF EP300 GATA3 ZNF263
2944656
chr12 120672529 rs143977564 G C
CTCF EP300 GATA3 ZNF263
2944657
chr12 120672548 rs58777856 T C
CTCF EP300 FOSL1 GATA3 JUN JUNB JUND SMC3 ZNF263
2944658
chr12 120672569 rs146888712 T C
CTCF EP300 GATA3 IRF1 PRDM1 SMAD2 SMC3 TEAD1 TEAD4 ZNF263
2944659
chr12 120672643 rs115316406 A G
CTCF EP300 FOXA1 GATA3 SMC3 ZNF263
2944660
chr12 120672661 rs536183437 AT A
CTCF EP300 FOXA1 GATA3 POU2F2 SMC3 ZNF263
2944661
chr12 120672663 rs549341396 T A
CTCF EP300 FOXA1 GATA3 POU2F2 SMC3 ZNF263
2944662
chr12 120672843 rs77660995 C T
CTCF EP300 GATA3 ZNF263
2944663
chr12 120672880 rs183051530 C A
E2F6 EP300 GATA3 ZNF263
2944664
Genes possibly regulated by vista15115[chr12:120672500-120673016]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 120565007 120632513 - GCN1L1 ENSG00000089154.6 120632513 0.53 1.0 12598 60013
chr12 120634489 120639038 - RPLP0 ENSG00000089157.11 120639038 0.66 1.0 12599 66538
chr12 120648250 120703574 - PXN ENSG00000089159.11 120703574 0.78 1.0 12600 69442
chr12 120740119 120751052 + SIRT4 ENSG00000089163.4 120740119 0.63 0.99 12601 32897
chr12 120759914 120765592 - PLA2G1B ENSG00000170890.9 120765592 1.0 0.99 12602 7424
Expression level of Genes
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miRNAs possibly regulated by vista15115[chr12:120672500-120673016]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results