EnhancerDB
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  3. vista1514[chr1:48515939-48516296]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1514[chr1:48515939-48516296]
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Tissue distribution of vista1514
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Transcription factor that possibly regulate vista1514[chr1:48515939-48516296]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 48515939 48515948 SP1 TRANSFAC yes 28728607
chr1 48515939 48515948 SP1 TRANSFAC yes 118287056
chr1 48515940 48515945 SP1 TRANSFAC yes 28728608
chr1 48515940 48515945 SP1 TRANSFAC yes 118287057
chr1 48515941 48515946 SP1 TRANSFAC yes 28728609
chr1 48515941 48515946 SP1 TRANSFAC yes 118287058
chr1 48515959 48515965 TCF4 TRANSFAC yes 28728610
chr1 48515959 48515965 TCF4 TRANSFAC yes 118287059
chr1 48515965 48515969 YY1 TRANSFAC yes 28728611
chr1 48515965 48515969 YY1 TRANSFAC yes 118287060
chr1 48515984 48516005 ZNF263 JASPAR yes 28728612
chr1 48515984 48516005 ZNF263 JASPAR yes 118287061
chr1 48515985 48515988 MYB TRANSFAC yes 28728613
chr1 48515985 48515988 MYB TRANSFAC yes 118287062
chr1 48515985 48516000 NR2C2 JASPAR yes 28728614
chr1 48515985 48516000 NR2C2 JASPAR yes 118287063
chr1 48515987 48516008 ZNF263 JASPAR yes 28728615
chr1 48515987 48516008 ZNF263 JASPAR yes 118287064
chr1 48516002 48516008 MZF1 JASPAR yes 28728616
chr1 48516002 48516008 MZF1 JASPAR yes 118287065
chr1 48516012 48516018 TCF4 TRANSFAC yes 28728617
chr1 48516012 48516018 TCF4 TRANSFAC yes 118287066
chr1 48516019 48516028 ZEB1 JASPAR yes 28728618
chr1 48516019 48516028 ZEB1 JASPAR yes 118287067
chr1 48516019 48516039 RREB1 JASPAR yes 28728619
chr1 48516019 48516039 RREB1 JASPAR yes 118287068
chr1 48516022 48516027 USF2 TRANSFAC yes 28728620
chr1 48516022 48516027 USF2 TRANSFAC yes 118287069
chr1 48516028 48516038 SREBF1 JASPAR yes 28728621
chr1 48516028 48516038 SREBF2 JASPAR yes 28728622
chr1 48516028 48516038 SREBF1 JASPAR yes 118287070
chr1 48516028 48516038 SREBF2 JASPAR yes 118287071
chr1 48516033 48516054 ZNF263 JASPAR yes 28728623
chr1 48516033 48516054 ZNF263 JASPAR yes 118287072
chr1 48516047 48516061 GATA2 JASPAR yes 28728624
chr1 48516047 48516061 GATA2 JASPAR yes 118287073
chr1 48516051 48516059 GATA3 JASPAR yes 28728625
chr1 48516051 48516059 GATA5 JASPAR yes 28728626
chr1 48516051 48516059 GATA3 JASPAR yes 118287074
chr1 48516051 48516059 GATA5 JASPAR yes 118287075
chr1 48516071 48516081 MZF1 JASPAR yes 28728627
chr1 48516071 48516081 MZF1 JASPAR yes 118287076
chr1 48516072 48516078 MZF1 JASPAR yes 28728628
chr1 48516072 48516078 MZF1 JASPAR yes 118287077
chr1 48516080 48516084 YY1 TRANSFAC yes 28728629
chr1 48516080 48516084 YY1 TRANSFAC yes 118287078
chr1 48516085 48516089 NFE TRANSFAC yes 28728630
chr1 48516085 48516089 NFE TRANSFAC yes 118287079
chr1 48516101 48516115 GATA2 JASPAR yes 28728631
chr1 48516101 48516115 GATA2 JASPAR yes 118287080
chr1 48516105 48516113 GATA3 JASPAR yes 28728632
chr1 48516105 48516113 GATA3 JASPAR yes 118287081
chr1 48516120 48516131 FOXH1 JASPAR yes 28728633
chr1 48516120 48516131 FOXH1 JASPAR yes 118287082
chr1 48516128 48516142 ONECUT1 JASPAR yes 28728634
chr1 48516128 48516142 ONECUT2 JASPAR yes 28728635
chr1 48516128 48516142 ONECUT3 JASPAR yes 28728636
chr1 48516128 48516142 ONECUT1 JASPAR yes 118287083
chr1 48516128 48516142 ONECUT2 JASPAR yes 118287084
chr1 48516128 48516142 ONECUT3 JASPAR yes 118287085
chr1 48516129 48516139 PAX3 JASPAR yes 28728637
chr1 48516129 48516139 PAX7 JASPAR yes 28728638
chr1 48516129 48516139 PAX3 JASPAR yes 118287086
chr1 48516129 48516139 PAX7 JASPAR yes 118287087
chr1 48516134 48516139 H4TF1 TRANSFAC yes 28728639
chr1 48516134 48516139 H4TF1 TRANSFAC yes 118287088
chr1 48516145 48516153 DLX6 JASPAR yes 28728640
chr1 48516145 48516153 MSX2 JASPAR yes 28728641
chr1 48516145 48516153 DLX6 JASPAR yes 118287089
chr1 48516145 48516153 MSX2 JASPAR yes 118287090
chr1 48516165 48516179 RORA JASPAR yes 28728642
chr1 48516165 48516179 RORA JASPAR yes 118287091
chr1 48516166 48516176 RORA JASPAR yes 28728643
chr1 48516166 48516176 RORA JASPAR yes 118287092
chr1 48516197 48516211 TCF7L2 JASPAR yes 28728644
chr1 48516197 48516211 TCF7L2 JASPAR yes 118287093
chr1 48516201 48516207 TCF1 TRANSFAC yes 28728645
chr1 48516201 48516207 TCF1 TRANSFAC yes 118287094
chr1 48516201 48516208 TCF4 TRANSFAC yes 28728646
chr1 48516201 48516208 TCF4 TRANSFAC yes 118287095
chr1 48516208 48516229 ZNF263 JASPAR yes 28728647
chr1 48516208 48516229 ZNF263 JASPAR yes 118287096
chr1 48516256 48516260 H4TF2 TRANSFAC yes 28728648
chr1 48516256 48516260 H4TF2 TRANSFAC yes 118287097
chr1 48516256 48516276 ESR1 JASPAR yes 28728649
chr1 48516256 48516276 ESR1 JASPAR yes 118287098
chr1 48516260 48516278 ESR2 JASPAR yes 28728650
chr1 48516260 48516278 ESR2 JASPAR yes 118287099
chr1 48516261 48516276 ESR2 JASPAR yes 28728651
chr1 48516261 48516276 ESR2 JASPAR yes 118287100
chr1 48516269 48516277 NR4A2 JASPAR yes 28728652
chr1 48516269 48516277 NR4A2 JASPAR yes 118287101
SNP sites on vista1514[chr1:48515939-48516296]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 48515997 rs189508581 C T
NR2C2 ZNF263
296282
chr1 48516114 rs604065 G A
GATA2
296283
chr1 48516219 rs511368 A C
ZNF263
296284
chr1 48516223 rs148393119 T G
ZNF263
296285
chr1 48516224 rs511390 G T
ZNF263
296286
Genes possibly regulated by vista1514[chr1:48515939-48516296]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 48226200 48462567 - TRABD2B ENSG00000269113.3 48462567 0.95 0.99 674 46628
chr1 48569306 48569878 + AL109659.1 ENSG00000269709.1 48569306 0.98 1.0 676 46990
Expression level of Genes
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miRNAs possibly regulated by vista1514[chr1:48515939-48516296]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results