EnhancerDB
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  3. vista1516[chr1:48539948-48540140]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1516[chr1:48539948-48540140]
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Tissue distribution of vista1516
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Transcription factor that possibly regulate vista1516[chr1:48539948-48540140]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 48539961 48539964 MYB TRANSFAC yes 118287122
chr1 48539971 48539976 ETS2 TRANSFAC yes 118287123
chr1 48539971 48539986 HNF4G JASPAR yes 118287124
chr1 48539971 48539986 LEF1 JASPAR yes 118287125
chr1 48539976 48539982 SOX10 JASPAR yes 118287126
chr1 48539983 48539994 PHOX2A JASPAR yes 118287127
chr1 48539983 48539994 PROP1 JASPAR yes 118287128
chr1 48540038 48540048 NFIA JASPAR yes 118287129
chr1 48540040 48540046 NFIC JASPAR yes 118287130
chr1 48540044 48540054 POU6F2 JASPAR yes 118287131
chr1 48540045 48540055 ALX3 JASPAR yes 118287132
chr1 48540045 48540055 EMX2 JASPAR yes 118287133
chr1 48540045 48540055 ESX1 JASPAR yes 118287134
chr1 48540045 48540055 GBX2 JASPAR yes 118287135
chr1 48540045 48540055 GSX1 JASPAR yes 118287136
chr1 48540045 48540055 GSX2 JASPAR yes 118287137
chr1 48540045 48540055 HESX1 JASPAR yes 118287138
chr1 48540045 48540055 HOXB2 JASPAR yes 118287139
chr1 48540045 48540055 HOXB3 JASPAR yes 118287140
chr1 48540045 48540055 LBX2 JASPAR yes 118287141
chr1 48540045 48540055 LHX2 JASPAR yes 118287142
chr1 48540045 48540055 LHX6 JASPAR yes 118287143
chr1 48540045 48540055 MEOX1 JASPAR yes 118287144
chr1 48540045 48540055 MEOX2 JASPAR yes 118287145
chr1 48540045 48540055 MIXL1 JASPAR yes 118287146
chr1 48540045 48540055 MNX1 JASPAR yes 118287147
chr1 48540045 48540055 NOTO JASPAR yes 118287148
chr1 48540045 48540055 POU6F1 JASPAR yes 118287149
chr1 48540045 48540055 RAX JASPAR yes 118287150
chr1 48540045 48540056 HOXA10 JASPAR yes 118287151
chr1 48540046 48540054 BSX JASPAR yes 118287152
chr1 48540046 48540054 DLX6 JASPAR yes 118287153
chr1 48540046 48540054 EN1 JASPAR yes 118287154
chr1 48540046 48540054 ISX JASPAR yes 118287155
chr1 48540046 48540054 LBX1 JASPAR yes 118287156
chr1 48540046 48540054 LHX9 JASPAR yes 118287157
chr1 48540046 48540054 LMX1A JASPAR yes 118287158
chr1 48540046 48540054 LMX1B JASPAR yes 118287159
chr1 48540046 48540054 NKX6-1 JASPAR yes 118287160
chr1 48540046 48540054 NKX6-2 JASPAR yes 118287161
chr1 48540046 48540054 PAX4 JASPAR yes 118287162
chr1 48540046 48540054 PDX1 JASPAR yes 118287163
chr1 48540046 48540054 PRRX1 JASPAR yes 118287164
chr1 48540046 48540054 RAX2 JASPAR yes 118287165
chr1 48540046 48540054 SHOX JASPAR yes 118287166
chr1 48540046 48540054 UNCX JASPAR yes 118287167
chr1 48540046 48540054 VAX1 JASPAR yes 118287168
chr1 48540046 48540054 VAX2 JASPAR yes 118287169
chr1 48540046 48540054 VSX1 JASPAR yes 118287170
chr1 48540046 48540054 VSX2 JASPAR yes 118287171
chr1 48540046 48540056 HOXB13 JASPAR yes 118287172
chr1 48540046 48540056 HOXD13 JASPAR yes 118287173
chr1 48540068 48540072 TEAD2 TRANSFAC yes 118287174
chr1 48540078 48540091 POU2F2 JASPAR yes 118287175
chr1 48540078 48540092 POU1F1 JASPAR yes 118287176
chr1 48540079 48540091 POU3F1 JASPAR yes 118287177
chr1 48540079 48540091 POU3F2 JASPAR yes 118287178
chr1 48540079 48540092 POU3F3 JASPAR yes 118287179
chr1 48540080 48540092 POU2F1 JASPAR yes 118287180
chr1 48540081 48540088 POU2F1 TRANSFAC yes 118287181
chr1 48540081 48540088 POU2F2C TRANSFAC yes 118287182
chr1 48540081 48540088 POU2F2 TRANSFAC yes 118287183
chr1 48540081 48540090 POU5F1B JASPAR yes 118287184
chr1 48540088 48540103 STAT2 JASPAR yes 118287185
chr1 48540096 48540111 STAT1 JASPAR yes 118287186
chr1 48540098 48540109 STAT3 JASPAR yes 118287187
chr1 48540099 48540116 BCL6B JASPAR yes 118287188
chr1 48540106 48540111 ETS2 TRANSFAC yes 118287189
chr1 48540120 48540140 TP63 JASPAR yes 118287190
chr1 48540135 48540139 ESR1 TRANSFAC yes 118287191
SNP sites on vista1516[chr1:48539948-48540140]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 48540102 rs146708050 C G
BCL6B STAT1 STAT2 STAT3
296524
Genes possibly regulated by vista1516[chr1:48539948-48540140]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 48226200 48462567 - TRABD2B ENSG00000269113.3 48462567 0.95 0.99 674 22619
chr1 48569306 48569878 + AL109659.1 ENSG00000269709.1 48569306 0.98 1.0 676 70834
Expression level of Genes
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miRNAs possibly regulated by vista1516[chr1:48539948-48540140]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results