EnhancerDB
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  3. vista15340[chr12:125259292-125259624]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista15340[chr12:125259292-125259624]
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Tissue distribution of vista15340
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Transcription factor that possibly regulate vista15340[chr12:125259292-125259624]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 125258657 125259690 RUNX3 UCSC Txn Factor no Conserved 108069927
chr12 125258657 125259690 RUNX3 UCSC Txn Factor no Conserved 108069928
chr12 125258760 125259708 NFIC UCSC Txn Factor no Conserved 108069932
chr12 125258760 125259708 NFIC UCSC Txn Factor no Conserved 108069933
chr12 125258805 125259728 ATF2 UCSC Txn Factor no Conserved 108069936
chr12 125258805 125259728 ATF2 UCSC Txn Factor no Conserved 108069937
chr12 125258935 125259632 FOXM1 UCSC Txn Factor no Conserved 108069946
chr12 125258935 125259632 FOXM1 UCSC Txn Factor no Conserved 108069947
chr12 125258999 125259477 BATF UCSC Txn Factor no Conserved 108069959
chr12 125258999 125259477 BATF UCSC Txn Factor no Conserved 108069960
chr12 125259021 125259483 IRF4 UCSC Txn Factor no Conserved 108069966
chr12 125259033 125259570 NFATC1 UCSC Txn Factor no Conserved 108069969
chr12 125259045 125259658 BCL3 UCSC Txn Factor no Conserved 108069972
chr12 125259059 125259712 RELA UCSC Txn Factor no Conserved 108069974
chr12 125259069 125259679 EBF1 UCSC Txn Factor no Conserved 108069975
chr12 125259165 125259534 TCF12 UCSC Txn Factor no Conserved 108069986
chr12 125259286 125259300 TLX1 JASPAR yes 82498245
chr12 125259286 125259300 TLX1 JASPAR yes 124420772
chr12 125259293 125259314 IRF1 JASPAR yes 82498246
chr12 125259293 125259314 IRF1 JASPAR yes 124420773
chr12 125259295 125259310 IRF9 JASPAR yes 82498247
chr12 125259295 125259310 IRF9 JASPAR yes 124420774
chr12 125259296 125259310 IRF7 JASPAR yes 82498248
chr12 125259296 125259310 IRF8 JASPAR yes 82498249
chr12 125259296 125259310 IRF7 JASPAR yes 124420775
chr12 125259296 125259310 IRF8 JASPAR yes 124420776
chr12 125259297 125259312 PRDM1 JASPAR yes 82498250
chr12 125259297 125259312 STAT2 JASPAR yes 82498251
chr12 125259297 125259312 PRDM1 JASPAR yes 124420777
chr12 125259297 125259312 STAT2 JASPAR yes 124420778
chr12 125259297 125259315 IRF2 JASPAR yes 82498252
chr12 125259297 125259315 IRF2 JASPAR yes 124420779
chr12 125259298 125259310 IRF1 JASPAR yes 82498253
chr12 125259298 125259310 IRF1 JASPAR yes 124420780
chr12 125259319 125259330 BATF JASPAR yes 82498254
chr12 125259319 125259330 BATF JASPAR yes 124420781
chr12 125259321 125259332 FOSL1 JASPAR yes 82498255
chr12 125259321 125259332 FOSL1 JASPAR yes 124420782
chr12 125259321 125259339 MAFF JASPAR yes 82498256
chr12 125259321 125259339 MAFF JASPAR yes 124420783
chr12 125259322 125259337 MAFK JASPAR yes 82498257
chr12 125259322 125259337 MAFK JASPAR yes 124420784
chr12 125259350 125259364 EBF1 JASPAR yes 82498258
chr12 125259350 125259364 EBF1 JASPAR yes 124420785
chr12 125259358 125259372 STAT1 JASPAR yes 82498259
chr12 125259358 125259372 STAT1 JASPAR yes 124420786
chr12 125259375 125259386 TBX20 JASPAR yes 82498260
chr12 125259375 125259386 TBX20 JASPAR yes 124420787
chr12 125259412 125259418 LEF1 TRANSFAC yes 82498261
chr12 125259412 125259418 SOX10 JASPAR yes 82498262
chr12 125259412 125259418 LEF1 TRANSFAC yes 124420788
chr12 125259412 125259418 SOX10 JASPAR yes 124420789
chr12 125259418 125259438 RREB1 JASPAR yes 82498263
chr12 125259418 125259438 RREB1 JASPAR yes 124420790
chr12 125259421 125259436 MAFK JASPAR yes 82498264
chr12 125259421 125259436 MAFK JASPAR yes 124420791
chr12 125259425 125259440 RUNX2 JASPAR yes 82498265
chr12 125259425 125259440 RUNX2 JASPAR yes 124420792
chr12 125259455 125259466 DUX4 JASPAR yes 82498266
chr12 125259455 125259466 DUX4 JASPAR yes 124420793
chr12 125259473 125259488 STAT1 JASPAR yes 82498267
chr12 125259473 125259488 STAT1 JASPAR yes 124420794
chr12 125259476 125259492 ZNF143 JASPAR yes 82498268
chr12 125259476 125259492 ZNF143 JASPAR yes 124420795
chr12 125259496 125259510 TLX1 JASPAR yes 82498269
chr12 125259496 125259510 TLX1 JASPAR yes 124420796
chr12 125259497 125259503 MAZ TRANSFAC yes 82498270
chr12 125259497 125259503 MAZ TRANSFAC yes 124420797
chr12 125259497 125259508 E2F6 JASPAR yes 82498271
chr12 125259497 125259508 E2F6 JASPAR yes 124420798
chr12 125259497 125259510 SMAD2 JASPAR yes 82498272
chr12 125259497 125259510 SMAD2 JASPAR yes 124420799
chr12 125259518 125259531 ATF4 JASPAR yes 82498273
chr12 125259518 125259531 ATF4 JASPAR yes 124420800
chr12 125259519 125259524 MYB TRANSFAC yes 82498274
chr12 125259519 125259524 MYB TRANSFAC yes 124420801
chr12 125259521 125259527 JUN TRANSFAC yes 82498275
chr12 125259521 125259527 JUN TRANSFAC yes 124420802
chr12 125259526 125259537 GCM1 JASPAR yes 82498276
chr12 125259526 125259537 GCM1 JASPAR yes 124420803
chr12 125259528 125259537 THAP1 JASPAR yes 82498277
chr12 125259528 125259537 THAP1 JASPAR yes 124420804
chr12 125259531 125259536 SP1 TRANSFAC yes 82498278
chr12 125259531 125259536 SP1 TRANSFAC yes 124420805
chr12 125259533 125259545 MYBL1 JASPAR yes 82498279
chr12 125259533 125259545 MYBL1 JASPAR yes 124420806
chr12 125259538 125259541 MYB TRANSFAC yes 82498280
chr12 125259538 125259541 MYB TRANSFAC yes 124420807
chr12 125259557 125259571 JUN JASPAR yes 82498281
chr12 125259557 125259571 JUN JASPAR yes 124420808
chr12 125259560 125259571 FOSL2 JASPAR yes 82498282
chr12 125259560 125259571 JUNB JASPAR yes 82498283
chr12 125259560 125259571 FOSL2 JASPAR yes 124420809
chr12 125259560 125259571 JUNB JASPAR yes 124420810
chr12 125259561 125259569 FOXC1 JASPAR yes 82498284
chr12 125259561 125259569 FOXC1 JASPAR yes 124420811
chr12 125259563 125259569 JUN TRANSFAC yes 82498285
chr12 125259563 125259569 JUN TRANSFAC yes 124420812
chr12 125259581 125259601 RREB1 JASPAR yes 82498286
chr12 125259581 125259601 RREB1 JASPAR yes 124420813
chr12 125259593 125259605 ZBTB7B JASPAR yes 82498287
chr12 125259593 125259605 ZBTB7B JASPAR yes 124420814
chr12 125259595 125259608 NFKB1 JASPAR yes 82498288
chr12 125259595 125259608 NFKB2 JASPAR yes 82498289
chr12 125259595 125259608 NFKB1 JASPAR yes 124420815
chr12 125259595 125259608 NFKB2 JASPAR yes 124420816
chr12 125259596 125259606 NFKB1 JASPAR yes 82498290
chr12 125259596 125259606 RELA JASPAR yes 82498291
chr12 125259596 125259606 REL JASPAR yes 82498292
chr12 125259596 125259606 NFKB1 JASPAR yes 124420817
chr12 125259596 125259606 RELA JASPAR yes 124420818
chr12 125259596 125259606 REL JASPAR yes 124420819
chr12 125259596 125259607 NFKB1 JASPAR yes 82498293
chr12 125259596 125259607 NFKB1 JASPAR yes 124420820
chr12 125259596 125259609 NFKB1 JASPAR yes 82498294
chr12 125259596 125259609 NFKB2 JASPAR yes 82498295
chr12 125259596 125259609 NFKB1 JASPAR yes 124420821
chr12 125259596 125259609 NFKB2 JASPAR yes 124420822
chr12 125259597 125259607 NFKB1 JASPAR yes 82498296
chr12 125259597 125259607 RELA JASPAR yes 82498297
chr12 125259597 125259607 NFKB1 JASPAR yes 124420823
chr12 125259597 125259607 RELA JASPAR yes 124420824
chr12 125259597 125259608 NFKB1 JASPAR yes 82498298
chr12 125259597 125259608 NFKB1 JASPAR yes 124420825
chr12 125259604 125259619 PRDM1 JASPAR yes 82498299
chr12 125259604 125259619 PRDM1 JASPAR yes 124420826
chr12 125259613 125259634 IRF1 JASPAR yes 82498300
chr12 125259613 125259634 IRF1 JASPAR yes 124420827
SNP sites on vista15340[chr12:125259292-125259624]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 125259448 rs144263230 C T
ATF2 BATF BCL3 EBF1 FOXM1 IRF4 NFATC1 NFIC RELA RUNX3 TCF12
2973613
chr12 125259492 rs574116279 T C
ATF2 BCL3 EBF1 FOXM1 NFATC1 NFIC RELA RUNX3 TCF12 ZNF143
2973614
chr12 125259519 rs147824919 C A
ATF2 ATF4 BCL3 EBF1 FOXM1 MYB NFATC1 NFIC RELA RUNX3 TCF12
2973615
chr12 125259529 rs139710559 T C
ATF2 ATF4 BCL3 EBF1 FOXM1 GCM1 NFATC1 NFIC RELA RUNX3 TCF12 THAP1
2973616
chr12 125259532 rs376185031 G A
ATF2 BCL3 EBF1 FOXM1 GCM1 NFATC1 NFIC RELA RUNX3 SP1 TCF12 THAP1
2973617
chr12 125259562 rs149481917 GGTGA G
ATF2 BCL3 EBF1 FOSL2 FOXC1 FOXM1 JUN JUNB NFATC1 NFIC RELA RUNX3
2973618
chr12 125259562 rs376328267 GGTGA G
ATF2 BCL3 EBF1 FOSL2 FOXC1 FOXM1 JUN JUNB NFATC1 NFIC RELA RUNX3
2973619
chr12 125259562 rs754996376 GGTGA G
ATF2 BCL3 EBF1 FOSL2 FOXC1 FOXM1 JUN JUNB NFATC1 NFIC RELA RUNX3
2973620
chr12 125259563 rs545060316 G T
ATF2 BCL3 EBF1 FOSL2 FOXC1 FOXM1 JUN JUNB NFATC1 NFIC RELA RUNX3
2973621
chr12 125259594 rs563268577 A T
ATF2 BCL3 EBF1 FOXM1 NFIC RELA RREB1 RUNX3 ZBTB7B
2973622
chr12 125259619 rs145224934 C T
ATF2 BCL3 EBF1 FOXM1 IRF1 NFIC PRDM1 RELA RUNX3
2973623
Genes possibly regulated by vista15340[chr12:125259292-125259624]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
Expression level of Genes
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No results
miRNAs possibly regulated by vista15340[chr12:125259292-125259624]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results