EnhancerDB
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  3. vista15349[chr12:125395122-125395522]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista15349[chr12:125395122-125395522]
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Tissue distribution of vista15349
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Transcription factor that possibly regulate vista15349[chr12:125395122-125395522]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 125393675 125397217 POLR2A UCSC Txn Factor no Conserved 108070324
chr12 125395112 125395124 GRHL1 JASPAR yes 82498713
chr12 125395112 125395124 GRHL1 JASPAR yes 124432946
chr12 125395113 125395123 TFCP2 JASPAR yes 82498714
chr12 125395113 125395123 TFCP2 JASPAR yes 124432947
chr12 125395133 125395138 MYC TRANSFAC yes 82498715
chr12 125395133 125395138 MYC TRANSFAC yes 124432948
chr12 125395153 125395167 STAT1 JASPAR yes 82498716
chr12 125395153 125395167 STAT1 JASPAR yes 124432949
chr12 125395153 125395168 STAT2 JASPAR yes 82498717
chr12 125395153 125395168 STAT2 JASPAR yes 124432950
chr12 125395164 125395168 NFE TRANSFAC yes 82498718
chr12 125395164 125395168 NFE TRANSFAC yes 124432951
chr12 125395165 125395170 GATA2 JASPAR yes 82498719
chr12 125395165 125395170 GATA2 JASPAR yes 124432952
chr12 125395172 125395184 NHLH1 JASPAR yes 82498720
chr12 125395172 125395184 NHLH1 JASPAR yes 124432953
chr12 125395173 125395183 MSC JASPAR yes 82498721
chr12 125395173 125395183 MYF6 JASPAR yes 82498722
chr12 125395173 125395183 NHLH1 JASPAR yes 82498723
chr12 125395173 125395183 TFAP4 JASPAR yes 82498724
chr12 125395173 125395183 MSC JASPAR yes 124432954
chr12 125395173 125395183 MYF6 JASPAR yes 124432955
chr12 125395173 125395183 NHLH1 JASPAR yes 124432956
chr12 125395173 125395183 TFAP4 JASPAR yes 124432957
chr12 125395173 125395185 TAL1 JASPAR yes 82498725
chr12 125395173 125395185 TAL1 JASPAR yes 124432958
chr12 125395232 125395238 ETS1 JASPAR yes 82498726
chr12 125395232 125395238 ETS1 JASPAR yes 124432959
chr12 125395238 125395248 TEAD1 JASPAR yes 82498727
chr12 125395238 125395248 TEAD4 JASPAR yes 82498728
chr12 125395238 125395248 TEAD1 JASPAR yes 124432960
chr12 125395238 125395248 TEAD4 JASPAR yes 124432961
chr12 125395238 125395250 TEAD1 JASPAR yes 82498729
chr12 125395238 125395250 TEAD1 JASPAR yes 124432962
chr12 125395239 125395247 TEAD3 JASPAR yes 82498730
chr12 125395239 125395247 TEAD3 JASPAR yes 124432963
chr12 125395252 125395262 GSX2 JASPAR yes 82498731
chr12 125395252 125395262 GSX2 JASPAR yes 124432964
chr12 125395253 125395261 BSX JASPAR yes 82498732
chr12 125395253 125395261 BSX JASPAR yes 124432965
chr12 125395295 125395307 GRHL1 JASPAR yes 82498733
chr12 125395295 125395307 GRHL1 JASPAR yes 124432966
chr12 125395296 125395306 TFCP2 JASPAR yes 82498734
chr12 125395296 125395306 TFCP2 JASPAR yes 124432967
chr12 125395303 125395314 STAT3 JASPAR yes 82498735
chr12 125395303 125395314 STAT3 JASPAR yes 124432968
chr12 125395304 125395325 ZNF263 JASPAR yes 82498736
chr12 125395304 125395325 ZNF263 JASPAR yes 124432969
chr12 125395312 125395326 SPI1 JASPAR yes 82498737
chr12 125395312 125395326 SPI1 JASPAR yes 124432970
chr12 125395336 125395349 EOMES JASPAR yes 82498738
chr12 125395336 125395349 EOMES JASPAR yes 124432971
chr12 125395337 125395341 YY1 TRANSFAC yes 82498739
chr12 125395337 125395341 YY1 TRANSFAC yes 124432972
chr12 125395338 125395348 TBR1 JASPAR yes 82498740
chr12 125395338 125395348 TBR1 JASPAR yes 124432973
chr12 125395338 125395349 TBX20 JASPAR yes 82498741
chr12 125395338 125395349 TBX2 JASPAR yes 82498742
chr12 125395338 125395349 TBX20 JASPAR yes 124432974
chr12 125395338 125395349 TBX2 JASPAR yes 124432975
chr12 125395339 125395349 TBX21 JASPAR yes 82498743
chr12 125395339 125395349 TBX21 JASPAR yes 124432976
chr12 125395340 125395343 MYB TRANSFAC yes 82498744
chr12 125395340 125395343 MYB TRANSFAC yes 124432977
chr12 125395340 125395348 MGA JASPAR yes 82498745
chr12 125395340 125395348 TBX15 JASPAR yes 82498746
chr12 125395340 125395348 TBX1 JASPAR yes 82498747
chr12 125395340 125395348 TBX4 JASPAR yes 82498748
chr12 125395340 125395348 TBX5 JASPAR yes 82498749
chr12 125395340 125395348 MGA JASPAR yes 124432978
chr12 125395340 125395348 TBX15 JASPAR yes 124432979
chr12 125395340 125395348 TBX1 JASPAR yes 124432980
chr12 125395340 125395348 TBX4 JASPAR yes 124432981
chr12 125395340 125395348 TBX5 JASPAR yes 124432982
chr12 125395362 125395367 NFY TRANSFAC yes 82498750
chr12 125395362 125395367 NFY TRANSFAC yes 124432983
chr12 125395366 125395370 LFA1 TRANSFAC yes 82498751
chr12 125395366 125395370 LFA1 TRANSFAC yes 124432984
chr12 125395391 125395406 HNF4G JASPAR yes 82498752
chr12 125395391 125395406 HNF4G JASPAR yes 124432985
chr12 125395392 125395406 NR2F1 JASPAR yes 82498753
chr12 125395392 125395406 NR2F1 JASPAR yes 124432986
chr12 125395392 125395407 HNF4A JASPAR yes 82498754
chr12 125395392 125395407 HNF4A JASPAR yes 124432987
chr12 125395397 125395410 NR2F1 JASPAR yes 82498755
chr12 125395397 125395410 NR2F1 JASPAR yes 124432988
chr12 125395401 125395405 ESR1 TRANSFAC yes 82498756
chr12 125395401 125395405 ESR1 TRANSFAC yes 124432989
chr12 125395404 125395413 SOX9 JASPAR yes 82498757
chr12 125395404 125395413 SOX9 JASPAR yes 124432990
chr12 125395406 125395415 SRY JASPAR yes 82498758
chr12 125395406 125395415 SRY JASPAR yes 124432991
chr12 125395407 125395426 CTCF JASPAR yes 82498759
chr12 125395407 125395426 CTCF JASPAR yes 124432992
chr12 125395433 125395439 NFIC JASPAR yes 82498760
chr12 125395433 125395439 NFIC JASPAR yes 124432993
chr12 125395435 125395439 H1TF2 TRANSFAC yes 82498761
chr12 125395435 125395439 NFE TRANSFAC yes 82498762
chr12 125395435 125395439 SRF TRANSFAC yes 82498763
chr12 125395435 125395439 H1TF2 TRANSFAC yes 124432994
chr12 125395435 125395439 NFE TRANSFAC yes 124432995
chr12 125395435 125395439 SRF TRANSFAC yes 124432996
chr12 125395442 125395452 FIGLA JASPAR yes 82498764
chr12 125395442 125395452 FIGLA JASPAR yes 124432997
chr12 125395443 125395452 SNAI2 JASPAR yes 82498765
chr12 125395443 125395452 SNAI2 JASPAR yes 124432998
chr12 125395444 125395449 USF2 TRANSFAC yes 82498766
chr12 125395444 125395449 USF2 TRANSFAC yes 124432999
chr12 125395468 125395472 YY1 TRANSFAC yes 82498767
chr12 125395468 125395472 YY1 TRANSFAC yes 124433000
chr12 125395469 125395480 HOXC13 JASPAR yes 82498768
chr12 125395469 125395480 HOXC13 JASPAR yes 124433001
chr12 125395484 125395493 SRY JASPAR yes 82498769
chr12 125395484 125395493 SRY JASPAR yes 124433002
chr12 125395492 125395507 SOX21 JASPAR yes 82498770
chr12 125395492 125395507 SOX21 JASPAR yes 124433003
chr12 125395492 125395508 SOX4 JASPAR yes 82498771
chr12 125395492 125395508 SOX4 JASPAR yes 124433004
chr12 125395499 125395508 SOX9 JASPAR yes 82498772
chr12 125395499 125395508 SOX9 JASPAR yes 124433005
chr12 125395501 125395510 SRY JASPAR yes 82498773
chr12 125395501 125395510 SRY JASPAR yes 124433006
SNP sites on vista15349[chr12:125395122-125395522]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 125395161 rs113660988 G C
POLR2A STAT1 STAT2
2975019
chr12 125395205 rs112006451 A G
POLR2A
2975020
chr12 125395207 rs36063735 CGA C
POLR2A
2975021
chr12 125395223 rs74856282 G A,C
POLR2A
2975022
chr12 125395225 rs186575021 T C
POLR2A
2975023
chr12 125395234 rs191758585 G A
ETS1 POLR2A
2975024
chr12 125395316 rs61005182 T C,G
POLR2A SPI1 ZNF263
2975025
chr12 125395349 rs373118678 T G
EOMES POLR2A TBX2 TBX20 TBX21
2975026
chr12 125395399 rs145758177 A G
HNF4A HNF4G NR2F1 POLR2A
2975027
chr12 125395405 rs568482436 CAATT C
ESR1 HNF4A HNF4G NR2F1 POLR2A SOX9
2975028
Genes possibly regulated by vista15349[chr12:125395122-125395522]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 125261402 125367214 - SCARB1 ENSG00000073060.11 125367214 0.95 1.0 12680 72092
chr12 125396150 125401914 - UBC ENSG00000150991.10 125401914 0.85 1.0 12681 93608
chr12 125431371 125473668 - DHX37 ENSG00000150990.3 125473668 0.62 1.0 12682 21854
chr12 125478246 125515777 + BRI3BP ENSG00000184992.10 125478246 0.71 0.99 12683 17276
Expression level of Genes
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miRNAs possibly regulated by vista15349[chr12:125395122-125395522]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results