EnhancerDB
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  3. vista15353[chr12:125405622-125405939]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista15353[chr12:125405622-125405939]
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Tissue distribution of vista15353
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Transcription factor that possibly regulate vista15353[chr12:125405622-125405939]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 125405111 125406405 POLR2A UCSC Txn Factor no Conserved 108070591
chr12 125405689 125406102 POU2F2 UCSC Txn Factor no Conserved 108070605
chr12 125405694 125406079 EBF1 UCSC Txn Factor no Conserved 108070608
chr12 125405705 125406081 SP1 UCSC Txn Factor no Conserved 108070613
chr12 125405738 125406149 EP300 UCSC Txn Factor no Conserved 108070620
chr12 125405743 125406177 RUNX3 UCSC Txn Factor no Conserved 108070621
chr12 125405791 125406492 CHD2 UCSC Txn Factor no Conserved 108070633
chr12 125405802 125406088 PAX5 UCSC Txn Factor no Conserved 108070637
chr12 125405827 125406157 BHLHE40 UCSC Txn Factor no Conserved 108070639
chr12 125405882 125406097 BCL11A UCSC Txn Factor no Conserved 108070648
chr12 125405626 125405636 NFKB1 JASPAR yes 82498988
chr12 125405626 125405636 REL JASPAR yes 82498989
chr12 125405626 125405636 NFKB1 JASPAR yes 124433797
chr12 125405626 125405636 REL JASPAR yes 124433798
chr12 125405683 125405698 NR2C2 JASPAR yes 82498990
chr12 125405683 125405698 NR2C2 JASPAR yes 124433799
chr12 125405698 125405705 E2F1 TRANSFAC yes 82498991
chr12 125405698 125405705 E2F1 TRANSFAC yes 124433800
chr12 125405715 125405724 POU3F4 JASPAR yes 82498992
chr12 125405715 125405724 POU5F1B JASPAR yes 82498993
chr12 125405715 125405724 POU3F4 JASPAR yes 124433801
chr12 125405715 125405724 POU5F1B JASPAR yes 124433802
chr12 125405737 125405752 AR JASPAR yes 82498994
chr12 125405737 125405752 AR JASPAR yes 124433803
chr12 125405737 125405754 NR3C1 JASPAR yes 82498995
chr12 125405737 125405754 NR3C2 JASPAR yes 82498996
chr12 125405737 125405754 NR3C1 JASPAR yes 124433804
chr12 125405737 125405754 NR3C2 JASPAR yes 124433805
chr12 125405748 125405761 POU2F2 JASPAR yes 82498997
chr12 125405748 125405761 POU2F2 JASPAR yes 124433806
chr12 125405755 125405759 TEAD2 TRANSFAC yes 82498998
chr12 125405755 125405759 TEAD2 TRANSFAC yes 124433807
chr12 125405755 125405760 TBP TRANSFAC yes 82498999
chr12 125405755 125405760 TBP TRANSFAC yes 124433808
chr12 125405755 125405761 TMF TRANSFAC yes 82499000
chr12 125405755 125405761 TMF TRANSFAC yes 124433809
chr12 125405757 125405769 POU2F1 JASPAR yes 82499001
chr12 125405757 125405769 POU2F1 JASPAR yes 124433810
chr12 125405757 125405770 POU3F3 JASPAR yes 82499002
chr12 125405757 125405770 POU3F3 JASPAR yes 124433811
chr12 125405757 125405771 POU1F1 JASPAR yes 82499003
chr12 125405757 125405771 POU1F1 JASPAR yes 124433812
chr12 125405758 125405770 POU3F1 JASPAR yes 82499004
chr12 125405758 125405770 POU3F2 JASPAR yes 82499005
chr12 125405758 125405770 POU3F1 JASPAR yes 124433813
chr12 125405758 125405770 POU3F2 JASPAR yes 124433814
chr12 125405758 125405771 POU2F2 JASPAR yes 82499006
chr12 125405758 125405771 POU2F2 JASPAR yes 124433815
chr12 125405759 125405768 POU3F4 JASPAR yes 82499007
chr12 125405759 125405768 POU5F1B JASPAR yes 82499008
chr12 125405759 125405768 POU3F4 JASPAR yes 124433816
chr12 125405759 125405768 POU5F1B JASPAR yes 124433817
chr12 125405776 125405780 YY1 TRANSFAC yes 82499009
chr12 125405776 125405780 YY1 TRANSFAC yes 124433818
chr12 125405791 125405810 RFX2 JASPAR yes 82499010
chr12 125405791 125405810 RFX2 JASPAR yes 124433819
chr12 125405792 125405810 MAFF JASPAR yes 82499011
chr12 125405792 125405810 MAFF JASPAR yes 124433820
chr12 125405793 125405808 RFX5 JASPAR yes 82499012
chr12 125405793 125405808 RFX5 JASPAR yes 124433821
chr12 125405794 125405809 MAFK JASPAR yes 82499013
chr12 125405794 125405809 MAFK JASPAR yes 124433822
chr12 125405794 125405815 MAFG JASPAR yes 82499014
chr12 125405794 125405815 MAFG JASPAR yes 124433823
chr12 125405810 125405825 HNF4G JASPAR yes 82499015
chr12 125405810 125405825 HNF4G JASPAR yes 124433824
chr12 125405824 125405836 TEAD1 JASPAR yes 82499016
chr12 125405824 125405836 TEAD1 JASPAR yes 124433825
chr12 125405846 125405863 BCL6B JASPAR yes 82499017
chr12 125405846 125405863 BCL6B JASPAR yes 124433826
chr12 125405855 125405869 POU1F1 JASPAR yes 82499018
chr12 125405855 125405869 POU1F1 JASPAR yes 124433827
chr12 125405856 125405868 POU3F2 JASPAR yes 82499019
chr12 125405856 125405868 POU3F2 JASPAR yes 124433828
chr12 125405856 125405869 POU2F2 JASPAR yes 82499020
chr12 125405856 125405869 POU2F2 JASPAR yes 124433829
chr12 125405857 125405866 POU3F4 JASPAR yes 82499021
chr12 125405857 125405866 POU5F1B JASPAR yes 82499022
chr12 125405857 125405866 POU3F4 JASPAR yes 124433830
chr12 125405857 125405866 POU5F1B JASPAR yes 124433831
chr12 125405858 125405865 POU2F1 TRANSFAC yes 82499023
chr12 125405858 125405865 POU2F2 TRANSFAC yes 82499024
chr12 125405858 125405865 POU2F1 TRANSFAC yes 124433832
chr12 125405858 125405865 POU2F2 TRANSFAC yes 124433833
chr12 125405886 125405907 ZNF263 JASPAR yes 82499025
chr12 125405886 125405907 ZNF263 JASPAR yes 124433834
chr12 125405899 125405905 YY1 JASPAR yes 82499026
chr12 125405899 125405905 YY1 JASPAR yes 124433835
chr12 125405912 125405917 SP1 TRANSFAC yes 82499027
chr12 125405912 125405917 SP1 TRANSFAC yes 124433836
SNP sites on vista15353[chr12:125405622-125405939]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 125405757 rs146270711 A G
EBF1 EP300 POLR2A POU1F1 POU2F1 POU2F2 POU3F3 RUNX3 SP1 TBP TEAD2 TMF
2975185
chr12 125405795 rs117761851 G A
CHD2 EBF1 EP300 MAFF MAFG MAFK POLR2A POU2F2 RFX2 RFX5 RUNX3 SP1
2975186
chr12 125405801 rs181808653 C T
CHD2 EBF1 EP300 MAFF MAFG MAFK POLR2A POU2F2 RFX2 RFX5 RUNX3 SP1
2975187
chr12 125405876 rs79492972 C A
BHLHE40 CHD2 EBF1 EP300 PAX5 POLR2A POU2F2 RUNX3 SP1
2975188
chr12 125405909 rs149958820 CAG C
BCL11A BHLHE40 CHD2 EBF1 EP300 PAX5 POLR2A POU2F2 RUNX3 SP1
2975189
chr12 125405916 rs564205840 G C
BCL11A BHLHE40 CHD2 EBF1 EP300 PAX5 POLR2A POU2F2 RUNX3 SP1
2975190
chr12 125405931 rs111400875 C T
BCL11A BHLHE40 CHD2 EBF1 EP300 PAX5 POLR2A POU2F2 RUNX3 SP1
2975191
Genes possibly regulated by vista15353[chr12:125405622-125405939]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 125261402 125367214 - SCARB1 ENSG00000073060.11 125367214 0.95 1.0 12680 61592
chr12 125396150 125401914 - UBC ENSG00000150991.10 125401914 0.85 1.0 12681 96292
chr12 125431371 125473668 - DHX37 ENSG00000150990.3 125473668 0.62 1.0 12682 32271
chr12 125478246 125515777 + BRI3BP ENSG00000184992.10 125478246 0.71 0.99 12683 27693
Expression level of Genes
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miRNAs possibly regulated by vista15353[chr12:125405622-125405939]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results