EnhancerDB
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  3. vista15359[chr12:125534116-125534467]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista15359[chr12:125534116-125534467]
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Tissue distribution of vista15359
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Transcription factor that possibly regulate vista15359[chr12:125534116-125534467]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr12 125533756 125534708 POLR2A UCSC Txn Factor no Conserved 108071179
chr12 125534115 125534421 SP1 UCSC Txn Factor no Conserved 108071192
chr12 125534121 125534391 FOS UCSC Txn Factor no Conserved 108071194
chr12 125534130 125534367 PAX5 UCSC Txn Factor no Conserved 108071198
chr12 125534138 125534518 CHD2 UCSC Txn Factor no Conserved 108071200
chr12 125534156 125534396 SP2 UCSC Txn Factor no Conserved 108071205
chr12 125534180 125534386 PBX3 UCSC Txn Factor no Conserved 108071212
chr12 125534188 125534468 CREB1 UCSC Txn Factor no Conserved 108071215
chr12 125534109 125534122 SMAD2 JASPAR yes 82499234
chr12 125534109 125534122 SMAD2 JASPAR yes 124439416
chr12 125534121 125534126 GATA2 JASPAR yes 82499235
chr12 125534121 125534126 GATA2 JASPAR yes 124439417
chr12 125534122 125534139 ESR1 JASPAR yes 82499236
chr12 125534122 125534139 ESR1 JASPAR yes 124439418
chr12 125534126 125534137 ESRRA JASPAR yes 82499237
chr12 125534126 125534137 ESRRA JASPAR yes 124439419
chr12 125534131 125534139 MEIS2 JASPAR yes 82499238
chr12 125534131 125534139 MEIS3 JASPAR yes 82499239
chr12 125534131 125534139 MEIS2 JASPAR yes 124439420
chr12 125534131 125534139 MEIS3 JASPAR yes 124439421
chr12 125534143 125534164 REST JASPAR yes 82499240
chr12 125534143 125534164 REST JASPAR yes 124439422
chr12 125534160 125534178 ESR1 JASPAR yes 82499241
chr12 125534160 125534178 ESR1 JASPAR yes 124439423
chr12 125534162 125534177 ESR2 JASPAR yes 82499242
chr12 125534162 125534177 ESR2 JASPAR yes 124439424
chr12 125534170 125534175 SP1 TRANSFAC yes 82499243
chr12 125534170 125534175 SP1 TRANSFAC yes 124439425
chr12 125534170 125534176 SP1 TRANSFAC yes 82499244
chr12 125534170 125534176 SP1 TRANSFAC yes 124439426
chr12 125534185 125534201 NFYA JASPAR yes 82499245
chr12 125534185 125534201 NFYA JASPAR yes 124439427
chr12 125534190 125534195 NFY TRANSFAC yes 82499246
chr12 125534190 125534195 NFY TRANSFAC yes 124439428
chr12 125534194 125534198 LFA1 TRANSFAC yes 82499247
chr12 125534194 125534198 LFA1 TRANSFAC yes 124439429
chr12 125534198 125534203 SP1 TRANSFAC yes 82499248
chr12 125534198 125534203 SP1 TRANSFAC yes 124439430
chr12 125534223 125534228 NFY TRANSFAC yes 82499249
chr12 125534223 125534228 NFY TRANSFAC yes 124439431
chr12 125534241 125534258 PAX1 JASPAR yes 82499250
chr12 125534241 125534258 PAX9 JASPAR yes 82499251
chr12 125534241 125534258 PAX1 JASPAR yes 124439432
chr12 125534241 125534258 PAX9 JASPAR yes 124439433
chr12 125534256 125534269 ZBED1 JASPAR yes 82499252
chr12 125534256 125534269 ZBED1 JASPAR yes 124439434
chr12 125534256 125534274 NFYA JASPAR yes 82499253
chr12 125534256 125534274 NFYA JASPAR yes 124439435
chr12 125534259 125534275 NFYA JASPAR yes 82499254
chr12 125534259 125534275 NFYA JASPAR yes 124439436
chr12 125534262 125534277 NFYB JASPAR yes 82499255
chr12 125534262 125534277 NFYB JASPAR yes 124439437
chr12 125534264 125534269 NFY TRANSFAC yes 82499256
chr12 125534264 125534269 NFY TRANSFAC yes 124439438
chr12 125534327 125534342 NFYB JASPAR yes 82499257
chr12 125534327 125534342 NFYB JASPAR yes 124439439
chr12 125534329 125534345 NFYA JASPAR yes 82499258
chr12 125534329 125534345 NFYA JASPAR yes 124439440
chr12 125534330 125534348 NFYA JASPAR yes 82499259
chr12 125534330 125534348 NFYA JASPAR yes 124439441
chr12 125534333 125534343 EN2 JASPAR yes 82499260
chr12 125534333 125534343 EN2 JASPAR yes 124439442
chr12 125534334 125534338 H1TF2 TRANSFAC yes 82499261
chr12 125534334 125534338 NFE TRANSFAC yes 82499262
chr12 125534334 125534338 SRF TRANSFAC yes 82499263
chr12 125534334 125534338 H1TF2 TRANSFAC yes 124439443
chr12 125534334 125534338 NFE TRANSFAC yes 124439444
chr12 125534334 125534338 SRF TRANSFAC yes 124439445
chr12 125534387 125534392 SP1 TRANSFAC yes 82499264
chr12 125534387 125534392 SP1 TRANSFAC yes 124439446
chr12 125534399 125534420 ZNF263 JASPAR yes 82499265
chr12 125534399 125534420 ZNF263 JASPAR yes 124439447
chr12 125534403 125534414 E2F1 JASPAR yes 82499266
chr12 125534403 125534414 E2F1 JASPAR yes 124439448
chr12 125534404 125534415 E2F4 JASPAR yes 82499267
chr12 125534404 125534415 E2F6 JASPAR yes 82499268
chr12 125534404 125534415 E2F4 JASPAR yes 124439449
chr12 125534404 125534415 E2F6 JASPAR yes 124439450
chr12 125534408 125534413 ETS2 TRANSFAC yes 82499269
chr12 125534408 125534413 ETS2 TRANSFAC yes 124439451
chr12 125534411 125534432 ZNF263 JASPAR yes 82499270
chr12 125534411 125534432 ZNF263 JASPAR yes 124439452
chr12 125534413 125534419 MAZ TRANSFAC yes 82499271
chr12 125534413 125534419 MAZ TRANSFAC yes 124439453
chr12 125534416 125534437 ZNF263 JASPAR yes 82499272
chr12 125534416 125534437 ZNF263 JASPAR yes 124439454
chr12 125534417 125534427 SP1 JASPAR yes 82499273
chr12 125534417 125534427 SP1 JASPAR yes 124439455
chr12 125534422 125534432 SP1 JASPAR yes 82499274
chr12 125534422 125534432 SP1 JASPAR yes 124439456
chr12 125534423 125534443 RREB1 JASPAR yes 82499275
chr12 125534423 125534443 RREB1 JASPAR yes 124439457
chr12 125534424 125534430 MAZ TRANSFAC yes 82499276
chr12 125534424 125534430 MAZ TRANSFAC yes 124439458
chr12 125534426 125534440 PLAG1 JASPAR yes 82499277
chr12 125534426 125534440 PLAG1 JASPAR yes 124439459
chr12 125534428 125534438 SP1 JASPAR yes 82499278
chr12 125534428 125534438 SP1 JASPAR yes 124439460
chr12 125534436 125534441 SP1 TRANSFAC yes 82499279
chr12 125534436 125534441 SP1 TRANSFAC yes 124439461
chr12 125534438 125534443 TFAP2A TRANSFAC yes 82499280
chr12 125534438 125534443 TFAP2A TRANSFAC yes 124439462
chr12 125534438 125534444 MZF1 JASPAR yes 82499281
chr12 125534438 125534444 MZF1 JASPAR yes 124439463
SNP sites on vista15359[chr12:125534116-125534467]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr12 125534140 rs188181711 G A
CHD2 FOS PAX5 POLR2A SP1
2976076
chr12 125534150 rs193099102 G C
CHD2 FOS PAX5 POLR2A REST SP1
2976077
chr12 125534155 rs571412763 T C
CHD2 FOS PAX5 POLR2A REST SP1
2976078
chr12 125534219 rs12809858 T C
CHD2 CREB1 FOS PAX5 PBX3 POLR2A SP1 SP2
2976079
chr12 125534286 rs79700197 A C
CHD2 CREB1 FOS PAX5 PBX3 POLR2A SP1 SP2
2976080
chr12 125534297 rs368562223 G A
CHD2 CREB1 FOS PAX5 PBX3 POLR2A SP1 SP2
2976081
chr12 125534305 rs73420001 C G
CHD2 CREB1 FOS PAX5 PBX3 POLR2A SP1 SP2
2976082
chr12 125534367 rs549919655 A C,G
CHD2 CREB1 FOS PAX5 PBX3 POLR2A SP1 SP2
2976083
chr12 125534409 rs535601447 G C
CHD2 CREB1 E2F1 E2F4 E2F6 ETS2 POLR2A SP1 ZNF263
2976084
chr12 125534427 rs57246496 G A
CHD2 CREB1 MAZ PLAG1 POLR2A RREB1 SP1 ZNF263
2976085
chr12 125534447 rs576541952 C T
CHD2 CREB1 POLR2A
2976086
Genes possibly regulated by vista15359[chr12:125534116-125534467]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr12 125431371 125473668 - DHX37 ENSG00000150990.3 125473668 0.62 1.0 12682 39552
chr12 125478246 125515777 + BRI3BP ENSG00000184992.10 125478246 0.71 0.99 12683 44130
chr12 125549925 125627873 + AACS ENSG00000081760.12 125549925 0.79 0.99 12684 84542
Expression level of Genes
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miRNAs possibly regulated by vista15359[chr12:125534116-125534467]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results