EnhancerDB
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  3. vista154[chr1:6034742-6034859]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista154[chr1:6034742-6034859]
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Tissue distribution of vista154
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Transcription factor that possibly regulate vista154[chr1:6034742-6034859]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 6034734 6034748 POU1F1 JASPAR yes 26376701
chr1 6034734 6034748 POU1F1 JASPAR yes 118220562
chr1 6034735 6034747 POU3F2 JASPAR yes 26376702
chr1 6034735 6034747 POU3F2 JASPAR yes 118220563
chr1 6034742 6034757 FOXP1 JASPAR yes 26376704
chr1 6034742 6034757 FOXP1 JASPAR yes 118220564
chr1 6034743 6034758 FOXP1 JASPAR yes 26376705
chr1 6034743 6034758 FOXP1 JASPAR yes 118220565
chr1 6034744 6034759 FOXP1 JASPAR yes 26376706
chr1 6034744 6034759 FOXP1 JASPAR yes 118220566
chr1 6034745 6034760 FOXP1 JASPAR yes 26376707
chr1 6034745 6034760 FOXP1 JASPAR yes 118220567
chr1 6034745 6034766 IRF1 JASPAR yes 26376708
chr1 6034745 6034766 IRF1 JASPAR yes 118220568
chr1 6034746 6034761 FOXP1 JASPAR yes 26376709
chr1 6034746 6034761 FOXP1 JASPAR yes 118220569
chr1 6034746 6034767 IRF1 JASPAR yes 26376710
chr1 6034746 6034767 IRF1 JASPAR yes 118220570
chr1 6034747 6034762 FOXP1 JASPAR yes 26376711
chr1 6034747 6034762 FOXP1 JASPAR yes 118220571
chr1 6034750 6034765 STAT2 JASPAR yes 26376712
chr1 6034750 6034765 STAT2 JASPAR yes 118220572
chr1 6034816 6034831 FOXA1 JASPAR yes 26376713
chr1 6034816 6034831 FOXA1 JASPAR yes 118220573
chr1 6034824 6034835 NFE2L2 JASPAR yes 26376714
chr1 6034824 6034835 NFE2L2 JASPAR yes 118220574
chr1 6034832 6034847 RUNX2 JASPAR yes 26376715
chr1 6034832 6034847 RUNX2 JASPAR yes 118220575
chr1 6034851 6034864 NR2F1 JASPAR yes 26376716
chr1 6034851 6034864 NR2F1 JASPAR yes 118220576
chr1 6034855 6034859 ESR1 TRANSFAC yes 26376717
chr1 6034855 6034859 ESR1 TRANSFAC yes 118220577
chr1 6034855 6034866 USF1 JASPAR yes 26376718
chr1 6034855 6034866 USF1 JASPAR yes 118220578
chr1 6034859 6034869 TBR1 JASPAR yes 26376719
chr1 6034859 6034869 TBR1 JASPAR yes 118220579
SNP sites on vista154[chr1:6034742-6034859]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 6034743 rs534055075 CAGA C
FOXP1 POU1F1 POU3F2
35801
chr1 6034743 rs775647456 CAGA C
FOXP1 POU1F1 POU3F2
35802
chr1 6034797 rs115036756 T A no 35803
chr1 6034798 rs116777435 C A no 35804
Genes possibly regulated by vista154[chr1:6034742-6034859]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 5922871 6052533 - NPHP4 ENSG00000131697.13 6052533 0.78 1.0 87 82326
chr1 6051526 6161253 + KCNAB2 ENSG00000069424.10 6051526 0.83 1.0 88 83333
chr1 6100630 6101399 - AL035406.1 ENSG00000268332.1 6101399 0.0 1.0 89 33460
Expression level of Genes
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miRNAs possibly regulated by vista154[chr1:6034742-6034859]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 243509527 243509548 + hsa-miR-4677-3p MIMAT0019761 243419357 0.1091667615556627 0.834486 0.0 138
Expression level of miRNAs
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