EnhancerDB
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  3. vista155[chr1:6040561-6040806]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista155[chr1:6040561-6040806]
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Tissue distribution of vista155
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Transcription factor that possibly regulate vista155[chr1:6040561-6040806]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 6040562 6040568 HiNF-A TRANSFAC yes 26377237
chr1 6040562 6040568 HiNF-A TRANSFAC yes 118220580
chr1 6040562 6040577 JUND JASPAR yes 26377238
chr1 6040562 6040577 JUND JASPAR yes 118220581
chr1 6040573 6040583 TFCP2 JASPAR yes 26377239
chr1 6040573 6040583 TFCP2 JASPAR yes 118220582
chr1 6040591 6040602 NFKB1 JASPAR yes 26377240
chr1 6040591 6040602 NFKB1 JASPAR yes 118220583
chr1 6040591 6040606 HSF1 JASPAR yes 26377241
chr1 6040591 6040606 HSF1 JASPAR yes 118220584
chr1 6040592 6040602 NFKB1 JASPAR yes 26377242
chr1 6040592 6040602 REL JASPAR yes 26377243
chr1 6040592 6040602 NFKB1 JASPAR yes 118220585
chr1 6040592 6040602 REL JASPAR yes 118220586
chr1 6040592 6040605 HSF1 JASPAR yes 26377244
chr1 6040592 6040605 HSF2 JASPAR yes 26377245
chr1 6040592 6040605 HSF4 JASPAR yes 26377246
chr1 6040592 6040605 HSF1 JASPAR yes 118220587
chr1 6040592 6040605 HSF2 JASPAR yes 118220588
chr1 6040592 6040605 HSF4 JASPAR yes 118220589
chr1 6040600 6040612 NHLH1 JASPAR yes 26377247
chr1 6040600 6040612 NHLH1 JASPAR yes 118220590
chr1 6040601 6040611 NHLH1 JASPAR yes 26377248
chr1 6040601 6040611 NHLH1 JASPAR yes 118220591
chr1 6040615 6040622 SP1 TRANSFAC yes 26377249
chr1 6040615 6040622 SP1 TRANSFAC yes 118220592
chr1 6040615 6040625 SP1 JASPAR yes 26377250
chr1 6040615 6040625 SP1 JASPAR yes 118220593
chr1 6040617 6040622 SP1 TRANSFAC yes 26377251
chr1 6040617 6040622 SP1 TRANSFAC yes 118220594
chr1 6040617 6040628 E2F4 JASPAR yes 26377252
chr1 6040617 6040628 E2F6 JASPAR yes 26377253
chr1 6040617 6040628 E2F4 JASPAR yes 118220595
chr1 6040617 6040628 E2F6 JASPAR yes 118220596
chr1 6040618 6040623 SP1 TRANSFAC yes 26377254
chr1 6040618 6040623 SP1 TRANSFAC yes 118220597
chr1 6040631 6040646 NFYB JASPAR yes 26377255
chr1 6040631 6040646 NFYB JASPAR yes 118220598
chr1 6040633 6040649 NFYA JASPAR yes 26377256
chr1 6040633 6040649 NFYA JASPAR yes 118220599
chr1 6040634 6040639 SP1 TRANSFAC yes 26377257
chr1 6040634 6040639 SP1 TRANSFAC yes 118220600
chr1 6040634 6040652 NFYA JASPAR yes 26377258
chr1 6040634 6040652 NFYA JASPAR yes 118220601
chr1 6040637 6040647 EMX2 JASPAR yes 26377259
chr1 6040637 6040647 EN2 JASPAR yes 26377260
chr1 6040637 6040647 ESX1 JASPAR yes 26377261
chr1 6040637 6040647 GBX1 JASPAR yes 26377262
chr1 6040637 6040647 GBX2 JASPAR yes 26377263
chr1 6040637 6040647 HESX1 JASPAR yes 26377264
chr1 6040637 6040647 LBX2 JASPAR yes 26377265
chr1 6040637 6040647 LHX2 JASPAR yes 26377266
chr1 6040637 6040647 RAX JASPAR yes 26377267
chr1 6040637 6040647 EMX2 JASPAR yes 118220602
chr1 6040637 6040647 EN2 JASPAR yes 118220603
chr1 6040637 6040647 ESX1 JASPAR yes 118220604
chr1 6040637 6040647 GBX1 JASPAR yes 118220605
chr1 6040637 6040647 GBX2 JASPAR yes 118220606
chr1 6040637 6040647 HESX1 JASPAR yes 118220607
chr1 6040637 6040647 LBX2 JASPAR yes 118220608
chr1 6040637 6040647 LHX2 JASPAR yes 118220609
chr1 6040637 6040647 RAX JASPAR yes 118220610
chr1 6040638 6040642 H1TF2 TRANSFAC yes 26377268
chr1 6040638 6040642 NFE TRANSFAC yes 26377269
chr1 6040638 6040642 SRF TRANSFAC yes 26377270
chr1 6040638 6040642 H1TF2 TRANSFAC yes 118220611
chr1 6040638 6040642 NFE TRANSFAC yes 118220612
chr1 6040638 6040642 SRF TRANSFAC yes 118220613
chr1 6040638 6040646 BARX1 JASPAR yes 26377271
chr1 6040638 6040646 BSX JASPAR yes 26377272
chr1 6040638 6040646 EN1 JASPAR yes 26377273
chr1 6040638 6040646 ISX JASPAR yes 26377274
chr1 6040638 6040646 LHX9 JASPAR yes 26377275
chr1 6040638 6040646 MSX1 JASPAR yes 26377276
chr1 6040638 6040646 MSX2 JASPAR yes 26377277
chr1 6040638 6040646 PRRX1 JASPAR yes 26377278
chr1 6040638 6040646 RAX2 JASPAR yes 26377279
chr1 6040638 6040646 SHOX JASPAR yes 26377280
chr1 6040638 6040646 BARX1 JASPAR yes 118220614
chr1 6040638 6040646 BSX JASPAR yes 118220615
chr1 6040638 6040646 EN1 JASPAR yes 118220616
chr1 6040638 6040646 ISX JASPAR yes 118220617
chr1 6040638 6040646 LHX9 JASPAR yes 118220618
chr1 6040638 6040646 MSX1 JASPAR yes 118220619
chr1 6040638 6040646 MSX2 JASPAR yes 118220620
chr1 6040638 6040646 PRRX1 JASPAR yes 118220621
chr1 6040638 6040646 RAX2 JASPAR yes 118220622
chr1 6040638 6040646 SHOX JASPAR yes 118220623
chr1 6040645 6040666 ZNF263 JASPAR yes 26377281
chr1 6040645 6040666 ZNF263 JASPAR yes 118220624
chr1 6040648 6040669 ZNF263 JASPAR yes 26377282
chr1 6040648 6040669 ZNF263 JASPAR yes 118220625
chr1 6040654 6040675 ZNF263 JASPAR yes 26377283
chr1 6040654 6040675 ZNF263 JASPAR yes 118220626
chr1 6040658 6040679 ZNF263 JASPAR yes 26377284
chr1 6040658 6040679 ZNF263 JASPAR yes 118220627
chr1 6040660 6040666 MAZ TRANSFAC yes 26377285
chr1 6040660 6040666 MAZ TRANSFAC yes 118220628
chr1 6040664 6040674 SP1 JASPAR yes 26377286
chr1 6040664 6040674 SP1 JASPAR yes 118220629
chr1 6040665 6040669 LFA1 TRANSFAC yes 26377287
chr1 6040665 6040669 LFA1 TRANSFAC yes 118220630
chr1 6040670 6040676 MAZ TRANSFAC yes 26377288
chr1 6040670 6040676 MAZ TRANSFAC yes 118220631
chr1 6040676 6040684 MEIS3 JASPAR yes 26377289
chr1 6040676 6040684 MEIS3 JASPAR yes 118220632
chr1 6040676 6040689 ELF1 JASPAR yes 26377290
chr1 6040676 6040689 ELF1 JASPAR yes 118220633
chr1 6040678 6040689 ETV2 JASPAR yes 26377291
chr1 6040678 6040689 ETV2 JASPAR yes 118220634
chr1 6040679 6040689 ERF JASPAR yes 26377292
chr1 6040679 6040689 ETS1 JASPAR yes 26377293
chr1 6040679 6040689 ERF JASPAR yes 118220635
chr1 6040679 6040689 ETS1 JASPAR yes 118220636
chr1 6040679 6040690 ELK4 JASPAR yes 26377294
chr1 6040679 6040690 FLI1 JASPAR yes 26377295
chr1 6040679 6040690 ELK4 JASPAR yes 118220637
chr1 6040679 6040690 FLI1 JASPAR yes 118220638
chr1 6040707 6040724 BCL6B JASPAR yes 26377296
chr1 6040707 6040724 BCL6B JASPAR yes 118220639
chr1 6040723 6040735 GLI2 JASPAR yes 26377297
chr1 6040723 6040735 GLI2 JASPAR yes 118220640
chr1 6040729 6040733 ESR1 TRANSFAC yes 26377298
chr1 6040729 6040733 ESR1 TRANSFAC yes 118220641
chr1 6040736 6040757 ZNF263 JASPAR yes 26377299
chr1 6040736 6040757 ZNF263 JASPAR yes 118220642
chr1 6040747 6040757 SP1 JASPAR yes 26377300
chr1 6040747 6040757 SP1 JASPAR yes 118220643
chr1 6040749 6040754 ETS2 TRANSFAC yes 26377301
chr1 6040749 6040754 ETS2 TRANSFAC yes 118220644
chr1 6040765 6040783 ESR1 JASPAR yes 26377302
chr1 6040765 6040783 ESR1 JASPAR yes 118220645
SNP sites on vista155[chr1:6040561-6040806]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 6040584 rs505523 G A no 35888
chr1 6040654 rs74049339 C G
ZNF263
35889
chr1 6040658 rs535711617 A ACAGGGAGGGG
ZNF263
35890
chr1 6040658 rs77920922 A ACAGGGAGGGG
ZNF263
35891
chr1 6040710 rs17028981 C T
BCL6B
35892
chr1 6040773 rs189259833 G A
ESR1
35893
chr1 6040805 rs112237167 C T no 35894
Genes possibly regulated by vista155[chr1:6040561-6040806]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 5922871 6052533 - NPHP4 ENSG00000131697.13 6052533 0.78 1.0 87 88273
chr1 6051526 6161253 + KCNAB2 ENSG00000069424.10 6051526 0.83 1.0 88 89280
chr1 6100630 6101399 - AL035406.1 ENSG00000268332.1 6101399 0.0 1.0 89 39407
Expression level of Genes
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miRNAs possibly regulated by vista155[chr1:6040561-6040806]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results