EnhancerDB
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  3. vista1565[chr1:51475745-51476056]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1565[chr1:51475745-51476056]
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Tissue distribution of vista1565
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Transcription factor that possibly regulate vista1565[chr1:51475745-51476056]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 51475763 51475767 ESR1 TRANSFAC yes 118288860
chr1 51475773 51475778 ETS2 TRANSFAC yes 118288861
chr1 51475773 51475788 SCRT1 JASPAR yes 118288862
chr1 51475783 51475787 TEAD2 TRANSFAC yes 118288863
chr1 51475783 51475788 TBP TRANSFAC yes 118288864
chr1 51475783 51475789 TMF TRANSFAC yes 118288865
chr1 51475793 51475810 RARA JASPAR yes 118288866
chr1 51475808 51475812 YY1 TRANSFAC yes 118288867
chr1 51475848 51475853 NFY TRANSFAC yes 118288868
chr1 51475854 51475874 PPARG JASPAR yes 118288869
chr1 51475879 51475889 HMBOX1 JASPAR yes 118288870
chr1 51475880 51475888 LBX1 JASPAR yes 118288871
chr1 51475885 51475888 MYB TRANSFAC yes 118288872
chr1 51475886 51475901 PRDM1 JASPAR yes 118288873
chr1 51475889 51475894 ETS2 TRANSFAC yes 118288874
chr1 51475907 51475918 EBF1 JASPAR yes 118288875
chr1 51475908 51475920 E2F8 JASPAR yes 118288876
chr1 51475925 51475935 FIGLA JASPAR yes 118288877
chr1 51475927 51475932 USF2 TRANSFAC yes 118288878
chr1 51475950 51475963 POU2F2 JASPAR yes 118288879
chr1 51475951 51475963 POU3F1 JASPAR yes 118288880
chr1 51475951 51475963 POU3F2 JASPAR yes 118288881
chr1 51475951 51475964 POU3F3 JASPAR yes 118288882
chr1 51475952 51475964 POU2F1 JASPAR yes 118288883
chr1 51475953 51475962 POU3F4 JASPAR yes 118288884
chr1 51475953 51475962 POU5F1B JASPAR yes 118288885
chr1 51475953 51475965 POU3F1 JASPAR yes 118288886
chr1 51475953 51475966 POU2F2 JASPAR yes 118288887
chr1 51475954 51475963 POU3F4 JASPAR yes 118288888
chr1 51475954 51475963 POU5F1B JASPAR yes 118288889
chr1 51475972 51475976 TEAD2 TRANSFAC yes 118288890
chr1 51475974 51475977 MYB TRANSFAC yes 118288891
chr1 51475983 51476004 IRF1 JASPAR yes 118288892
chr1 51475985 51475991 PEA3 TRANSFAC yes 118288893
chr1 51475997 51476011 ONECUT2 JASPAR yes 118288894
chr1 51475997 51476011 ONECUT3 JASPAR yes 118288895
chr1 51475998 51476003 GATA2 JASPAR yes 118288896
chr1 51476013 51476021 GATA3 JASPAR yes 118288897
chr1 51476013 51476028 FOXP1 JASPAR yes 118288898
chr1 51476016 51476022 TBP TRANSFAC yes 118288899
chr1 51476017 51476032 FOXP1 JASPAR yes 118288900
chr1 51476018 51476029 FOXA1 JASPAR yes 118288901
chr1 51476036 51476042 ZNF354C JASPAR yes 118288902
SNP sites on vista1565[chr1:51475745-51476056]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 51475870 rs150125474 C T
PPARG
303719
chr1 51475942 rs79832210 A G no 303720
chr1 51475978 rs189082900 C T no 303721
chr1 51476003 rs11580026 A T
GATA2 IRF1 ONECUT2 ONECUT3
303722
Genes possibly regulated by vista1565[chr1:51475745-51476056]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 50905150 51425935 - FAF1 ENSG00000185104.15 51425935 0.6 1.0 684 50190
chr1 51426417 51440305 + CDKN2C ENSG00000123080.6 51426417 0.81 0.98 685 50672
chr1 51567906 51613752 + C1orf185 ENSG00000204006.4 51567906 0.0 1.0 686 8150
Expression level of Genes
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miRNAs possibly regulated by vista1565[chr1:51475745-51476056]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results