EnhancerDB
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  3. vista1572[chr1:51823993-51824400]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1572[chr1:51823993-51824400]
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Tissue distribution of vista1572
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Transcription factor that possibly regulate vista1572[chr1:51823993-51824400]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 51824036 51824039 MYB TRANSFAC yes 118289215
chr1 51824037 51824053 SOX8 JASPAR yes 118289216
chr1 51824057 51824062 TFAP2A TRANSFAC yes 118289217
chr1 51824057 51824063 MZF1 JASPAR yes 118289218
chr1 51824061 51824076 MEF2A JASPAR yes 118289219
chr1 51824063 51824075 MEF2A JASPAR yes 118289220
chr1 51824065 51824069 YY1 TRANSFAC yes 118289221
chr1 51824068 51824076 GATA3 JASPAR yes 118289222
chr1 51824074 51824086 INSM1 JASPAR yes 118289223
chr1 51824076 51824096 RREB1 JASPAR yes 118289224
chr1 51824092 51824098 NFIC JASPAR yes 118289225
chr1 51824095 51824111 POU4F2 JASPAR yes 118289226
chr1 51824101 51824115 IRF7 JASPAR yes 118289227
chr1 51824103 51824119 POU4F2 JASPAR yes 118289228
chr1 51824103 51824119 POU4F3 JASPAR yes 118289229
chr1 51824105 51824119 POU4F1 JASPAR yes 118289230
chr1 51824110 51824123 POU3F3 JASPAR yes 118289231
chr1 51824110 51824124 POU1F1 JASPAR yes 118289232
chr1 51824110 51824128 NFYA JASPAR yes 118289233
chr1 51824115 51824125 ALX3 JASPAR yes 118289234
chr1 51824115 51824125 ESX1 JASPAR yes 118289235
chr1 51824115 51824125 GBX1 JASPAR yes 118289236
chr1 51824115 51824125 GBX2 JASPAR yes 118289237
chr1 51824115 51824125 GSX1 JASPAR yes 118289238
chr1 51824115 51824125 GSX2 JASPAR yes 118289239
chr1 51824115 51824125 HESX1 JASPAR yes 118289240
chr1 51824115 51824125 HOXB3 JASPAR yes 118289241
chr1 51824115 51824125 LBX2 JASPAR yes 118289242
chr1 51824115 51824125 LHX2 JASPAR yes 118289243
chr1 51824115 51824125 MIXL1 JASPAR yes 118289244
chr1 51824115 51824125 RAX JASPAR yes 118289245
chr1 51824116 51824124 BARX1 JASPAR yes 118289246
chr1 51824116 51824124 BSX JASPAR yes 118289247
chr1 51824116 51824124 EN1 JASPAR yes 118289248
chr1 51824116 51824124 ISX JASPAR yes 118289249
chr1 51824116 51824124 LHX9 JASPAR yes 118289250
chr1 51824116 51824124 MSX1 JASPAR yes 118289251
chr1 51824116 51824124 MSX2 JASPAR yes 118289252
chr1 51824116 51824124 PRRX1 JASPAR yes 118289253
chr1 51824116 51824124 RAX2 JASPAR yes 118289254
chr1 51824116 51824124 SHOX JASPAR yes 118289255
chr1 51824116 51824125 VENTX JASPAR yes 118289256
chr1 51824117 51824127 PAX3 JASPAR yes 118289257
chr1 51824120 51824135 STAT2 JASPAR yes 118289258
chr1 51824121 51824135 STAT1 JASPAR yes 118289259
chr1 51824132 51824143 DMRT3 JASPAR yes 118289260
chr1 51824154 51824160 TCF4 TRANSFAC yes 118289261
chr1 51824177 51824181 NFE TRANSFAC yes 118289262
chr1 51824184 51824195 CEBPA JASPAR yes 118289263
chr1 51824204 51824218 EBF1 JASPAR yes 118289264
chr1 51824205 51824216 EBF1 JASPAR yes 118289265
chr1 51824206 51824217 EBF1 JASPAR yes 118289266
chr1 51824246 51824249 MYB TRANSFAC yes 118289267
chr1 51824254 51824265 CEBPB JASPAR yes 118289268
chr1 51824260 51824275 FOXP1 JASPAR yes 118289269
chr1 51824267 51824281 SPI1 JASPAR yes 118289270
chr1 51824286 51824290 TEAD2 TRANSFAC yes 118289271
chr1 51824287 51824297 MSC JASPAR yes 118289272
chr1 51824296 51824306 HOXA13 JASPAR yes 118289273
chr1 51824296 51824306 HOXB13 JASPAR yes 118289274
chr1 51824296 51824306 HOXD13 JASPAR yes 118289275
chr1 51824296 51824307 HOXA10 JASPAR yes 118289276
chr1 51824297 51824306 CDX1 JASPAR yes 118289277
chr1 51824297 51824308 CDX2 JASPAR yes 118289278
chr1 51824304 51824319 MEF2A JASPAR yes 118289279
chr1 51824305 51824320 MEF2C JASPAR yes 118289280
chr1 51824333 51824345 NHLH1 JASPAR yes 118289281
chr1 51824334 51824344 MSC JASPAR yes 118289282
chr1 51824334 51824344 NHLH1 JASPAR yes 118289283
chr1 51824334 51824344 TFAP4 JASPAR yes 118289284
chr1 51824347 51824359 PROX1 JASPAR yes 118289285
chr1 51824364 51824384 RREB1 JASPAR yes 118289286
chr1 51824365 51824386 IRF1 JASPAR yes 118289287
chr1 51824366 51824381 FOXP1 JASPAR yes 118289288
chr1 51824367 51824378 FOXP2 JASPAR yes 118289289
chr1 51824367 51824379 FOXC2 JASPAR yes 118289290
chr1 51824369 51824389 RREB1 JASPAR yes 118289291
chr1 51824369 51824390 IRF1 JASPAR yes 118289292
chr1 51824370 51824391 IRF1 JASPAR yes 118289293
chr1 51824371 51824386 FOXP1 JASPAR yes 118289294
chr1 51824375 51824396 IRF1 JASPAR yes 118289295
chr1 51824376 51824382 TCF4 TRANSFAC yes 118289296
chr1 51824376 51824391 FOXP1 JASPAR yes 118289297
chr1 51824376 51824397 IRF1 JASPAR yes 118289298
chr1 51824377 51824388 FOXP2 JASPAR yes 118289299
chr1 51824377 51824389 FOXC2 JASPAR yes 118289300
chr1 51824377 51824392 STAT2 JASPAR yes 118289301
chr1 51824377 51824398 IRF1 JASPAR yes 118289302
chr1 51824378 51824393 FOXP1 JASPAR yes 118289303
chr1 51824380 51824395 FOXP1 JASPAR yes 118289304
chr1 51824381 51824396 FOXP1 JASPAR yes 118289305
chr1 51824382 51824397 FOXP1 JASPAR yes 118289306
chr1 51824383 51824398 FOXP1 JASPAR yes 118289307
chr1 51824384 51824399 FOXP1 JASPAR yes 118289308
chr1 51824385 51824400 FOXP1 JASPAR yes 118289309
SNP sites on vista1572[chr1:51823993-51824400]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 51824004 rs114323350 T C no 305323
chr1 51824074 rs368763046 TC T
GATA3 INSM1 MEF2A
305324
chr1 51824105 rs114944984 A G
IRF7 POU4F1 POU4F2 POU4F3
305325
chr1 51824157 rs72910221 G T
TCF4
305326
chr1 51824166 rs540454812 A C no 305327
chr1 51824177 rs373380179 ACT A
NFE
305328
chr1 51824344 rs565091496 T G
MSC NHLH1 TFAP4
305329
chr1 51824381 rs112532451 G T
FOXC2 FOXP1 FOXP2 IRF1 RREB1 STAT2 TCF4
305330
chr1 51824391 rs535906091 T G
FOXP1 IRF1 STAT2
305331
Genes possibly regulated by vista1572[chr1:51823993-51824400]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 51752930 51810788 - TTC39A ENSG00000085831.11 51810788 0.84 1.0 688 86795
Expression level of Genes
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miRNAs possibly regulated by vista1572[chr1:51823993-51824400]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results