EnhancerDB
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  3. vista1573[chr1:51886085-51886464]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1573[chr1:51886085-51886464]
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Tissue distribution of vista1573
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Transcription factor that possibly regulate vista1573[chr1:51886085-51886464]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 51886099 51886102 MYB TRANSFAC yes 118289310
chr1 51886103 51886118 MEF2A JASPAR yes 118289311
chr1 51886104 51886119 MEF2A JASPAR yes 118289312
chr1 51886105 51886117 MEF2A JASPAR yes 118289313
chr1 51886105 51886117 MEF2B JASPAR yes 118289314
chr1 51886105 51886117 MEF2D JASPAR yes 118289315
chr1 51886106 51886116 MEF2A JASPAR yes 118289316
chr1 51886119 51886123 NFE TRANSFAC yes 118289317
chr1 51886128 51886139 DMRT3 JASPAR yes 118289318
chr1 51886148 51886152 YY1 TRANSFAC yes 118289319
chr1 51886180 51886184 YY1 TRANSFAC yes 118289320
chr1 51886182 51886190 GATA3 JASPAR yes 118289321
chr1 51886192 51886196 YY1 TRANSFAC yes 118289322
chr1 51886198 51886213 MEF2A JASPAR yes 118289323
chr1 51886199 51886214 MEF2C JASPAR yes 118289324
chr1 51886200 51886212 MEF2A JASPAR yes 118289325
chr1 51886200 51886212 MEF2B JASPAR yes 118289326
chr1 51886200 51886212 MEF2D JASPAR yes 118289327
chr1 51886201 51886211 MEF2A JASPAR yes 118289328
chr1 51886202 51886206 YY1 TRANSFAC yes 118289329
chr1 51886212 51886230 MAFF JASPAR yes 118289330
chr1 51886214 51886217 MYB TRANSFAC yes 118289331
chr1 51886219 51886231 TEAD1 JASPAR yes 118289332
chr1 51886221 51886231 TEAD1 JASPAR yes 118289333
chr1 51886221 51886231 TEAD4 JASPAR yes 118289334
chr1 51886234 51886247 POU2F2 JASPAR yes 118289335
chr1 51886234 51886248 POU1F1 JASPAR yes 118289336
chr1 51886235 51886247 POU3F1 JASPAR yes 118289337
chr1 51886235 51886247 POU3F2 JASPAR yes 118289338
chr1 51886242 51886246 YY1 TRANSFAC yes 118289339
chr1 51886243 51886251 FEV JASPAR yes 118289340
chr1 51886272 51886284 TEF JASPAR yes 118289341
chr1 51886288 51886291 MYB TRANSFAC yes 118289342
chr1 51886302 51886311 HIC2 JASPAR yes 118289343
chr1 51886311 51886314 MYB TRANSFAC yes 118289344
chr1 51886349 51886355 MYC TRANSFAC yes 118289345
chr1 51886354 51886357 MYB TRANSFAC yes 118289346
chr1 51886367 51886382 HSF1 JASPAR yes 118289347
chr1 51886368 51886381 HSF1 JASPAR yes 118289348
chr1 51886380 51886391 FOXB1 JASPAR yes 118289349
chr1 51886380 51886391 FOXC1 JASPAR yes 118289350
chr1 51886380 51886392 FOXC2 JASPAR yes 118289351
chr1 51886388 51886392 TEAD2 TRANSFAC yes 118289352
chr1 51886399 51886414 NFYB JASPAR yes 118289353
chr1 51886401 51886411 SREBF1 JASPAR yes 118289354
chr1 51886401 51886417 NFYA JASPAR yes 118289355
chr1 51886406 51886410 H1TF2 TRANSFAC yes 118289356
chr1 51886406 51886410 NFE TRANSFAC yes 118289357
chr1 51886406 51886410 SRF TRANSFAC yes 118289358
chr1 51886438 51886453 HSF1 JASPAR yes 118289359
chr1 51886446 51886460 SPI1 JASPAR yes 118289360
chr1 51886446 51886460 SPIC JASPAR yes 118289361
SNP sites on vista1573[chr1:51886085-51886464]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 51886418 rs76991305 A C no 305383
Genes possibly regulated by vista1573[chr1:51886085-51886464]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 51752930 51810788 - TTC39A ENSG00000085831.11 51810788 0.84 1.0 688 24703
chr1 51819935 51985000 - EPS15 ENSG00000085832.12 51985000 0.6 0.99 689 1464
Expression level of Genes
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miRNAs possibly regulated by vista1573[chr1:51886085-51886464]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results