EnhancerDB
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  3. vista1575[chr1:51986075-51986410]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1575[chr1:51986075-51986410]
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Tissue distribution of vista1575
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Transcription factor that possibly regulate vista1575[chr1:51986075-51986410]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 51983479 51986499 POLR2A UCSC Txn Factor no Conserved 107803200
chr1 51985898 51986593 GATA1 UCSC Txn Factor no Conserved 107803204
chr1 51986019 51986375 RCOR1 UCSC Txn Factor no Conserved 107803216
chr1 51986052 51986378 JUND UCSC Txn Factor no Conserved 107803223
chr1 51986082 51986217 EP300 UCSC Txn Factor no Conserved 107803236
chr1 51986091 51986101 SREBF2 JASPAR yes 118289393
chr1 51986112 51986126 GATA2 JASPAR yes 118289394
chr1 51986116 51986124 GATA3 JASPAR yes 118289395
chr1 51986116 51986124 GATA5 JASPAR yes 118289396
chr1 51986182 51986196 JUN JASPAR yes 118289397
chr1 51986184 51986195 BATF JASPAR yes 118289398
chr1 51986185 51986196 FOSL2 JASPAR yes 118289399
chr1 51986185 51986196 JUNB JASPAR yes 118289400
chr1 51986185 51986196 NFE2L2 JASPAR yes 118289401
chr1 51986186 51986197 FOS JASPAR yes 118289402
chr1 51986186 51986197 FOSL1 JASPAR yes 118289403
chr1 51986186 51986197 JUND JASPAR yes 118289404
chr1 51986187 51986198 FOSL2 JASPAR yes 118289405
chr1 51986187 51986198 JUNB JASPAR yes 118289406
chr1 51986187 51986201 JUN JASPAR yes 118289407
chr1 51986198 51986206 GATA3 JASPAR yes 118289408
chr1 51986245 51986249 YY1 TRANSFAC yes 118289409
chr1 51986276 51986288 YY1 JASPAR yes 118289410
chr1 51986279 51986285 YY1 JASPAR yes 118289411
chr1 51986289 51986293 YY1 TRANSFAC yes 118289412
chr1 51986297 51986312 RUNX2 JASPAR yes 118289413
chr1 51986298 51986307 RUNX2 JASPAR yes 118289414
chr1 51986298 51986308 RUNX3 JASPAR yes 118289415
chr1 51986298 51986309 RUNX1 JASPAR yes 118289416
chr1 51986309 51986313 NFE TRANSFAC yes 118289417
chr1 51986323 51986337 POU1F1 JASPAR yes 118289418
chr1 51986325 51986329 YY1 TRANSFAC yes 118289419
chr1 51986331 51986335 YY1 TRANSFAC yes 118289420
chr1 51986370 51986389 REST JASPAR yes 118289421
SNP sites on vista1575[chr1:51986075-51986410]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 51986097 rs72674581 G T
EP300 GATA1 JUND POLR2A RCOR1 SREBF2
305926
chr1 51986326 rs372905055 C T
GATA1 JUND POLR2A POU1F1 RCOR1 YY1
305927
chr1 51986401 rs75576050 A G
GATA1 POLR2A
305928
Genes possibly regulated by vista1575[chr1:51986075-51986410]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 51819935 51985000 - EPS15 ENSG00000085832.12 51985000 0.6 0.99 689 98925
chr1 52042851 52254889 + OSBPL9 ENSG00000117859.14 52042851 0.67 0.99 690 43559
Expression level of Genes
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miRNAs possibly regulated by vista1575[chr1:51986075-51986410]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results