EnhancerDB
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  3. vista1590[chr1:52507951-52508154]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1590[chr1:52507951-52508154]
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Tissue distribution of vista1590
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Transcription factor that possibly regulate vista1590[chr1:52507951-52508154]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 52507951 52507972 IRF1 JASPAR yes 118290012
chr1 52507953 52507964 FOXP2 JASPAR yes 118290013
chr1 52507957 52507972 FOXP1 JASPAR yes 118290014
chr1 52507957 52507977 RREB1 JASPAR yes 118290015
chr1 52507957 52507978 IRF1 JASPAR yes 118290016
chr1 52507958 52507979 IRF1 JASPAR yes 118290017
chr1 52507959 52507979 RREB1 JASPAR yes 118290018
chr1 52507962 52507974 IRF1 JASPAR yes 118290019
chr1 52507962 52507977 STAT2 JASPAR yes 118290020
chr1 52507963 52507978 FOXP1 JASPAR yes 118290021
chr1 52507963 52507984 IRF1 JASPAR yes 118290022
chr1 52507966 52507980 IRF7 JASPAR yes 118290023
chr1 52507983 52507989 TCF1 TRANSFAC yes 118290024
chr1 52507995 52507999 H1TF2 TRANSFAC yes 118290025
chr1 52507995 52507999 NFE TRANSFAC yes 118290026
chr1 52507995 52507999 SRF TRANSFAC yes 118290027
chr1 52508007 52508015 GATA3 JASPAR yes 118290028
chr1 52508014 52508018 H4TF2 TRANSFAC yes 118290029
chr1 52508038 52508044 SOX10 JASPAR yes 118290030
chr1 52508056 52508068 HES7 JASPAR yes 118290031
chr1 52508056 52508068 PKNOX2 JASPAR yes 118290032
chr1 52508057 52508067 HEY2 JASPAR yes 118290033
chr1 52508057 52508067 ID4 JASPAR yes 118290034
chr1 52508057 52508067 TCF4 JASPAR yes 118290035
chr1 52508058 52508067 SNAI2 JASPAR yes 118290036
chr1 52508058 52508069 NRF1 JASPAR yes 118290037
chr1 52508059 52508064 USF2 TRANSFAC yes 118290038
chr1 52508065 52508086 ZNF263 JASPAR yes 118290039
chr1 52508090 52508094 YY1 TRANSFAC yes 118290040
chr1 52508107 52508115 FOXL1 JASPAR yes 118290041
chr1 52508123 52508141 IRF2 JASPAR yes 118290042
chr1 52508124 52508145 IRF1 JASPAR yes 118290043
chr1 52508126 52508141 PRDM1 JASPAR yes 118290044
chr1 52508126 52508141 STAT2 JASPAR yes 118290045
chr1 52508127 52508141 STAT1 JASPAR yes 118290046
chr1 52508128 52508140 IRF1 JASPAR yes 118290047
chr1 52508128 52508142 IRF7 JASPAR yes 118290048
chr1 52508128 52508142 IRF8 JASPAR yes 118290049
chr1 52508128 52508143 IRF9 JASPAR yes 118290050
chr1 52508130 52508151 IRF1 JASPAR yes 118290051
chr1 52508132 52508147 PRDM1 JASPAR yes 118290052
chr1 52508132 52508147 STAT2 JASPAR yes 118290053
chr1 52508135 52508150 FOXP1 JASPAR yes 118290054
chr1 52508136 52508151 FOXP1 JASPAR yes 118290055
chr1 52508137 52508152 FOXP1 JASPAR yes 118290056
chr1 52508138 52508153 FOXP1 JASPAR yes 118290057
chr1 52508139 52508154 FOXP1 JASPAR yes 118290058
SNP sites on vista1590[chr1:52507951-52508154]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 52508021 rs113949736 AC A no 308970
Genes possibly regulated by vista1590[chr1:52507951-52508154]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 52373628 52456436 - RAB3B ENSG00000169213.6 52456436 0.83 1.0 692 48485
chr1 52485803 52521843 - TXNDC12 ENSG00000117862.7 52521843 0.67 1.0 693 86311
chr1 52497775 52499488 - KTI12 ENSG00000198841.3 52499488 0.72 0.99 694 91537
chr1 52521797 52556388 + BTF3L4 ENSG00000134717.13 52521797 0.68 0.99 695 86357
chr1 52608046 52812358 + ZFYVE9 ENSG00000157077.10 52608046 0.68 0.99 696 108
Expression level of Genes
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miRNAs possibly regulated by vista1590[chr1:52507951-52508154]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results