EnhancerDB
  1. Home
  2. Enhancers
  3. vista1592[chr1:52675788-52676068]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1592[chr1:52675788-52676068]
Back to top
Tissue distribution of vista1592
Back to top
Transcription factor that possibly regulate vista1592[chr1:52675788-52676068]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 52675791 52675796 GATA2 JASPAR yes 28891199
chr1 52675791 52675796 GATA2 JASPAR yes 118290076
chr1 52675796 52675801 GATA1 TRANSFAC yes 28891200
chr1 52675796 52675801 GATA1 TRANSFAC yes 118290077
chr1 52675808 52675815 NKX3-1 JASPAR yes 28891201
chr1 52675808 52675815 NKX3-1 JASPAR yes 118290078
chr1 52675823 52675834 HOXC13 JASPAR yes 28891202
chr1 52675823 52675834 HOXC13 JASPAR yes 118290079
chr1 52675837 52675843 ZNF354C JASPAR yes 28891203
chr1 52675837 52675843 ZNF354C JASPAR yes 118290080
chr1 52675841 52675852 NFE2L2 JASPAR yes 28891204
chr1 52675841 52675852 NFE2L2 JASPAR yes 118290081
chr1 52675851 52675862 FOS JASPAR yes 28891205
chr1 52675851 52675862 FOS JASPAR yes 118290082
chr1 52675852 52675863 FOSL2 JASPAR yes 28891206
chr1 52675852 52675863 JUNB JASPAR yes 28891207
chr1 52675852 52675863 FOSL2 JASPAR yes 118290083
chr1 52675852 52675863 JUNB JASPAR yes 118290084
chr1 52675853 52675864 BATF JASPAR yes 28891208
chr1 52675853 52675864 BATF JASPAR yes 118290085
chr1 52675854 52675864 POU6F2 JASPAR yes 28891209
chr1 52675854 52675864 POU6F2 JASPAR yes 118290086
chr1 52675855 52675865 EMX1 JASPAR yes 28891210
chr1 52675855 52675865 HOXB3 JASPAR yes 28891211
chr1 52675855 52675865 NOTO JASPAR yes 28891212
chr1 52675855 52675865 EMX1 JASPAR yes 118290087
chr1 52675855 52675865 HOXB3 JASPAR yes 118290088
chr1 52675855 52675865 NOTO JASPAR yes 118290089
chr1 52675856 52675864 NKX6-1 JASPAR yes 28891213
chr1 52675856 52675864 NKX6-2 JASPAR yes 28891214
chr1 52675856 52675864 NKX6-1 JASPAR yes 118290090
chr1 52675856 52675864 NKX6-2 JASPAR yes 118290091
chr1 52675858 52675862 YY1 TRANSFAC yes 28891215
chr1 52675858 52675862 YY1 TRANSFAC yes 118290092
chr1 52675891 52675900 NFIX JASPAR yes 28891216
chr1 52675891 52675900 NFIX JASPAR yes 118290093
chr1 52675891 52675901 NFIA JASPAR yes 28891217
chr1 52675891 52675901 NFIA JASPAR yes 118290094
chr1 52675893 52675899 NFIC JASPAR yes 28891218
chr1 52675893 52675899 NFIC JASPAR yes 118290095
chr1 52675894 52675906 SRF JASPAR yes 28891219
chr1 52675894 52675906 SRF JASPAR yes 118290096
chr1 52675895 52675899 H1TF2 TRANSFAC yes 28891220
chr1 52675895 52675899 NFE TRANSFAC yes 28891221
chr1 52675895 52675899 SRF TRANSFAC yes 28891222
chr1 52675895 52675899 H1TF2 TRANSFAC yes 118290097
chr1 52675895 52675899 NFE TRANSFAC yes 118290098
chr1 52675895 52675899 SRF TRANSFAC yes 118290099
chr1 52675901 52675905 TEAD2 TRANSFAC yes 28891223
chr1 52675901 52675905 TEAD2 TRANSFAC yes 118290100
chr1 52675905 52675916 HOXC11 JASPAR yes 28891224
chr1 52675905 52675916 HOXC12 JASPAR yes 28891225
chr1 52675905 52675916 HOXC11 JASPAR yes 118290101
chr1 52675905 52675916 HOXC12 JASPAR yes 118290102
chr1 52675906 52675916 HOXC10 JASPAR yes 28891226
chr1 52675906 52675916 HOXD11 JASPAR yes 28891227
chr1 52675906 52675916 HOXC10 JASPAR yes 118290103
chr1 52675906 52675916 HOXD11 JASPAR yes 118290104
chr1 52675926 52675930 YY1 TRANSFAC yes 28891228
chr1 52675926 52675930 YY1 TRANSFAC yes 118290105
chr1 52675926 52675940 JUN JASPAR yes 28891229
chr1 52675926 52675940 JUN JASPAR yes 118290106
chr1 52675927 52675937 GSX1 JASPAR yes 28891230
chr1 52675927 52675937 GSX2 JASPAR yes 28891231
chr1 52675927 52675937 HOXB3 JASPAR yes 28891232
chr1 52675927 52675937 POU6F1 JASPAR yes 28891233
chr1 52675927 52675937 GSX1 JASPAR yes 118290107
chr1 52675927 52675937 GSX2 JASPAR yes 118290108
chr1 52675927 52675937 HOXB3 JASPAR yes 118290109
chr1 52675927 52675937 POU6F1 JASPAR yes 118290110
chr1 52675928 52675936 NKX6-1 JASPAR yes 28891234
chr1 52675928 52675936 NKX6-2 JASPAR yes 28891235
chr1 52675928 52675936 NKX6-1 JASPAR yes 118290111
chr1 52675928 52675936 NKX6-2 JASPAR yes 118290112
chr1 52675928 52675938 POU6F2 JASPAR yes 28891236
chr1 52675928 52675938 POU6F2 JASPAR yes 118290113
chr1 52675928 52675939 BATF JASPAR yes 28891237
chr1 52675928 52675939 BATF JASPAR yes 118290114
chr1 52675929 52675940 FOSL2 JASPAR yes 28891238
chr1 52675929 52675940 JUNB JASPAR yes 28891239
chr1 52675929 52675940 FOSL2 JASPAR yes 118290115
chr1 52675929 52675940 JUNB JASPAR yes 118290116
chr1 52675930 52675941 FOS JASPAR yes 28891240
chr1 52675930 52675941 FOSL1 JASPAR yes 28891241
chr1 52675930 52675941 JUND JASPAR yes 28891242
chr1 52675930 52675941 FOS JASPAR yes 118290117
chr1 52675930 52675941 FOSL1 JASPAR yes 118290118
chr1 52675930 52675941 JUND JASPAR yes 118290119
chr1 52675931 52675940 JDP2 JASPAR yes 28891243
chr1 52675931 52675940 JDP2 JASPAR yes 118290120
chr1 52675931 52675942 JUNB JASPAR yes 28891244
chr1 52675931 52675942 JUNB JASPAR yes 118290121
chr1 52675932 52675939 JUN TRANSFAC yes 28891245
chr1 52675932 52675939 JUN TRANSFAC yes 118290122
chr1 52675932 52675943 BATF JASPAR yes 28891246
chr1 52675932 52675943 BATF JASPAR yes 118290123
chr1 52675948 52675952 YY1 TRANSFAC yes 28891247
chr1 52675948 52675952 YY1 TRANSFAC yes 118290124
chr1 52675948 52675963 STAT1 JASPAR yes 28891248
chr1 52675948 52675963 STAT1 JASPAR yes 118290125
chr1 52675950 52675961 STAT1 JASPAR yes 28891249
chr1 52675950 52675961 STAT1 JASPAR yes 118290126
chr1 52675974 52675989 RUNX2 JASPAR yes 28891250
chr1 52675974 52675989 RUNX2 JASPAR yes 118290127
chr1 52675988 52675994 PEA3 TRANSFAC yes 28891251
chr1 52675988 52675994 PEA3 TRANSFAC yes 118290128
chr1 52675997 52676003 LEF1 TRANSFAC yes 28891252
chr1 52675997 52676003 TCF4 TRANSFAC yes 28891253
chr1 52675997 52676003 LEF1 TRANSFAC yes 118290129
chr1 52675997 52676003 TCF4 TRANSFAC yes 118290130
chr1 52676000 52676006 GATA1 TRANSFAC yes 28891254
chr1 52676000 52676006 GATA1 TRANSFAC yes 118290131
chr1 52676031 52676037 MYC TRANSFAC yes 28891255
chr1 52676031 52676037 MYC TRANSFAC yes 118290132
chr1 52676052 52676058 JUN TRANSFAC yes 28891256
chr1 52676052 52676058 JUN TRANSFAC yes 118290133
chr1 52676056 52676059 MYB TRANSFAC yes 28891257
chr1 52676056 52676059 MYB TRANSFAC yes 118290134
chr1 52676059 52676063 YY1 TRANSFAC yes 28891258
chr1 52676059 52676063 YY1 TRANSFAC yes 118290135
SNP sites on vista1592[chr1:52675788-52676068]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 52675796 rs528672306 A C
GATA1 GATA2
309727
chr1 52675829 rs569057888 A T
HOXC13
309728
chr1 52675918 rs191314201 G A no 309729
chr1 52675947 rs182457859 T A no 309730
chr1 52676013 rs148941980 G A no 309731
chr1 52676056 rs143807581 G A
JUN MYB
309732
Genes possibly regulated by vista1592[chr1:52675788-52676068]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 52608046 52812358 + ZFYVE9 ENSG00000157077.10 52608046 0.68 0.99 696 32258
Expression level of Genes
Back to top
miRNAs possibly regulated by vista1592[chr1:52675788-52676068]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results