EnhancerDB
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  3. vista1593[chr1:52796099-52796229]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1593[chr1:52796099-52796229]
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Tissue distribution of vista1593
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Transcription factor that possibly regulate vista1593[chr1:52796099-52796229]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 52795555 52796336 POLR2A UCSC Txn Factor no Conserved 107803655
chr1 52795988 52796570 STAT1 UCSC Txn Factor no Conserved 107803668
chr1 52796107 52796205 STAT5A UCSC Txn Factor no Conserved 107803674
chr1 52796111 52796121 REL JASPAR yes 28893717
chr1 52796111 52796121 REL JASPAR yes 118290136
chr1 52796114 52796118 YY1 TRANSFAC yes 28893718
chr1 52796114 52796118 YY1 TRANSFAC yes 118290137
chr1 52796114 52796125 ELF5 JASPAR yes 28893719
chr1 52796114 52796125 ELF5 JASPAR yes 118290138
chr1 52796114 52796126 EHF JASPAR yes 28893720
chr1 52796114 52796126 ELF1 JASPAR yes 28893721
chr1 52796114 52796126 EHF JASPAR yes 118290139
chr1 52796114 52796126 ELF1 JASPAR yes 118290140
chr1 52796114 52796127 ELF1 JASPAR yes 28893722
chr1 52796114 52796127 ELF1 JASPAR yes 118290141
chr1 52796114 52796128 SPIC JASPAR yes 28893723
chr1 52796114 52796128 SPIC JASPAR yes 118290142
chr1 52796115 52796123 FEV JASPAR yes 28893724
chr1 52796115 52796123 FEV JASPAR yes 118290143
chr1 52796125 52796137 POU2F1 JASPAR yes 28893725
chr1 52796125 52796137 POU2F1 JASPAR yes 118290144
chr1 52796125 52796138 POU3F3 JASPAR yes 28893726
chr1 52796125 52796138 POU3F3 JASPAR yes 118290145
chr1 52796125 52796139 POU1F1 JASPAR yes 28893727
chr1 52796125 52796139 POU1F1 JASPAR yes 118290146
chr1 52796126 52796138 POU3F1 JASPAR yes 28893728
chr1 52796126 52796138 POU3F2 JASPAR yes 28893729
chr1 52796126 52796138 POU3F1 JASPAR yes 118290147
chr1 52796126 52796138 POU3F2 JASPAR yes 118290148
chr1 52796126 52796141 FOXP1 JASPAR yes 28893730
chr1 52796126 52796141 FOXP1 JASPAR yes 118290149
chr1 52796127 52796136 POU3F4 JASPAR yes 28893731
chr1 52796127 52796136 POU5F1B JASPAR yes 28893732
chr1 52796127 52796136 POU3F4 JASPAR yes 118290150
chr1 52796127 52796136 POU5F1B JASPAR yes 118290151
chr1 52796130 52796138 FOXO3 JASPAR yes 28893733
chr1 52796130 52796138 FOXO3 JASPAR yes 118290152
chr1 52796135 52796141 SOX10 JASPAR yes 28893734
chr1 52796135 52796141 SOX10 JASPAR yes 118290153
chr1 52796138 52796154 ZNF143 JASPAR yes 28893735
chr1 52796138 52796154 ZNF143 JASPAR yes 118290154
chr1 52796142 52796157 STAT1 JASPAR yes 28893736
chr1 52796142 52796157 STAT1 JASPAR yes 118290155
chr1 52796144 52796155 STAT1 JASPAR yes 28893737
chr1 52796144 52796155 STAT3 JASPAR yes 28893738
chr1 52796144 52796155 STAT1 JASPAR yes 118290156
chr1 52796144 52796155 STAT3 JASPAR yes 118290157
chr1 52796145 52796153 STAT6 TRANSFAC yes 28893739
chr1 52796145 52796153 STAT6 TRANSFAC yes 118290158
chr1 52796157 52796162 SP1 TRANSFAC yes 28893740
chr1 52796157 52796162 SP1 TRANSFAC yes 118290159
chr1 52796159 52796164 TFAP2A TRANSFAC yes 28893741
chr1 52796159 52796164 TFAP2A TRANSFAC yes 118290160
chr1 52796159 52796165 MZF1 JASPAR yes 28893742
chr1 52796159 52796165 MZF1 JASPAR yes 118290161
chr1 52796159 52796172 NFKB1 JASPAR yes 28893743
chr1 52796159 52796172 NFKB2 JASPAR yes 28893744
chr1 52796159 52796172 NFKB1 JASPAR yes 118290162
chr1 52796159 52796172 NFKB2 JASPAR yes 118290163
chr1 52796160 52796170 NFKB1 JASPAR yes 28893745
chr1 52796160 52796170 RELA JASPAR yes 28893746
chr1 52796160 52796170 REL JASPAR yes 28893747
chr1 52796160 52796170 NFKB1 JASPAR yes 118290164
chr1 52796160 52796170 RELA JASPAR yes 118290165
chr1 52796160 52796170 REL JASPAR yes 118290166
chr1 52796160 52796171 NFKB1 JASPAR yes 28893748
chr1 52796160 52796171 NFKB1 JASPAR yes 118290167
chr1 52796161 52796171 NFKB1 JASPAR yes 28893749
chr1 52796161 52796171 NFKB1 JASPAR yes 118290168
chr1 52796162 52796179 BCL6B JASPAR yes 28893750
chr1 52796162 52796179 BCL6B JASPAR yes 118290169
chr1 52796163 52796178 STAT1 JASPAR yes 28893751
chr1 52796163 52796178 STAT1 JASPAR yes 118290170
chr1 52796165 52796176 STAT1 JASPAR yes 28893752
chr1 52796165 52796176 STAT3 JASPAR yes 28893753
chr1 52796165 52796176 STAT1 JASPAR yes 118290171
chr1 52796165 52796176 STAT3 JASPAR yes 118290172
chr1 52796182 52796187 ETS2 TRANSFAC yes 28893754
chr1 52796182 52796187 ETS2 TRANSFAC yes 118290173
chr1 52796183 52796197 SPIC JASPAR yes 28893755
chr1 52796183 52796197 SPIC JASPAR yes 118290174
chr1 52796184 52796192 EHF JASPAR yes 28893756
chr1 52796184 52796192 EHF JASPAR yes 118290175
chr1 52796185 52796203 SRF JASPAR yes 28893757
chr1 52796185 52796203 SRF JASPAR yes 118290176
chr1 52796186 52796191 ETS2 TRANSFAC yes 28893758
chr1 52796186 52796191 ETS2 TRANSFAC yes 118290177
chr1 52796193 52796211 SRF JASPAR yes 28893759
chr1 52796193 52796211 SRF JASPAR yes 118290178
chr1 52796195 52796211 SRF JASPAR yes 28893760
chr1 52796195 52796211 SRF JASPAR yes 118290179
chr1 52796198 52796210 SRF JASPAR yes 28893761
chr1 52796198 52796210 SRF JASPAR yes 118290180
chr1 52796208 52796211 MYB TRANSFAC yes 28893762
chr1 52796208 52796211 MYB TRANSFAC yes 118290181
chr1 52796208 52796219 FLI1 JASPAR yes 28893763
chr1 52796208 52796219 FLI1 JASPAR yes 118290182
chr1 52796210 52796217 SPI1 JASPAR yes 28893764
chr1 52796210 52796217 SPI1 JASPAR yes 118290183
chr1 52796210 52796218 EHF JASPAR yes 28893765
chr1 52796210 52796218 FEV JASPAR yes 28893766
chr1 52796210 52796218 EHF JASPAR yes 118290184
chr1 52796210 52796218 FEV JASPAR yes 118290185
chr1 52796215 52796234 RFX2 JASPAR yes 28893767
chr1 52796215 52796234 RFX2 JASPAR yes 118290186
chr1 52796219 52796235 RFX3 JASPAR yes 28893768
chr1 52796219 52796235 RFX4 JASPAR yes 28893769
chr1 52796219 52796235 RFX5 JASPAR yes 28893770
chr1 52796219 52796235 RFX3 JASPAR yes 118290187
chr1 52796219 52796235 RFX4 JASPAR yes 118290188
chr1 52796219 52796235 RFX5 JASPAR yes 118290189
SNP sites on vista1593[chr1:52796099-52796229]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 52796143 rs202073323 GT G
POLR2A STAT1 STAT5A ZNF143
309940
chr1 52796208 rs574107101 G A
FLI1 MYB POLR2A SRF STAT1
309941
Genes possibly regulated by vista1593[chr1:52796099-52796229]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 52811395 52831865 - CC2D1B ENSG00000154222.10 52831865 0.62 1.0 697 64364
chr1 52838501 52870131 - ORC1 ENSG00000085840.8 52870131 0.91 0.99 698 26098
chr1 52870236 52886511 + PRPF38A ENSG00000134748.12 52870236 0.78 0.99 699 25993
Expression level of Genes
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miRNAs possibly regulated by vista1593[chr1:52796099-52796229]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results