EnhancerDB
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  3. vista1595[chr1:52999324-52999688]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1595[chr1:52999324-52999688]
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Tissue distribution of vista1595
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Transcription factor that possibly regulate vista1595[chr1:52999324-52999688]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 52999334 52999349 STAT1 JASPAR yes 118290224
chr1 52999336 52999347 STAT1 JASPAR yes 118290225
chr1 52999336 52999347 STAT3 JASPAR yes 118290226
chr1 52999341 52999355 STAT1 JASPAR yes 118290227
chr1 52999341 52999356 STAT2 JASPAR yes 118290228
chr1 52999345 52999350 ETS2 TRANSFAC yes 118290229
chr1 52999349 52999364 JUND JASPAR yes 118290230
chr1 52999350 52999363 JUN JASPAR yes 118290231
chr1 52999423 52999441 RARA JASPAR yes 118290232
chr1 52999451 52999462 CEBPB JASPAR yes 118290233
chr1 52999489 52999502 ZBTB18 JASPAR yes 118290234
chr1 52999491 52999501 ID4 JASPAR yes 118290235
chr1 52999491 52999501 TCF3 JASPAR yes 118290236
chr1 52999491 52999501 TCF4 JASPAR yes 118290237
chr1 52999493 52999502 ZEB1 JASPAR yes 118290238
chr1 52999494 52999502 TBX5 JASPAR yes 118290239
chr1 52999502 52999518 T JASPAR yes 118290240
chr1 52999506 52999514 TBX5 JASPAR yes 118290241
chr1 52999506 52999515 ZEB1 JASPAR yes 118290242
chr1 52999506 52999519 ZBTB18 JASPAR yes 118290243
chr1 52999507 52999517 FIGLA JASPAR yes 118290244
chr1 52999507 52999517 ID4 JASPAR yes 118290245
chr1 52999507 52999517 TCF3 JASPAR yes 118290246
chr1 52999507 52999517 TCF4 JASPAR yes 118290247
chr1 52999508 52999517 SNAI2 JASPAR yes 118290248
chr1 52999509 52999514 USF2 TRANSFAC yes 118290249
chr1 52999528 52999533 TFAP2A TRANSFAC yes 118290250
chr1 52999528 52999534 MZF1 JASPAR yes 118290251
chr1 52999563 52999573 SP1 JASPAR yes 118290252
chr1 52999565 52999570 SP1 TRANSFAC yes 118290253
chr1 52999579 52999589 SREBF1 JASPAR yes 118290254
chr1 52999588 52999599 CEBPB JASPAR yes 118290255
chr1 52999589 52999600 CEBPA JASPAR yes 118290256
chr1 52999608 52999619 CEBPA JASPAR yes 118290257
chr1 52999609 52999619 CEBPB JASPAR yes 118290258
chr1 52999609 52999619 CEBPD JASPAR yes 118290259
chr1 52999609 52999619 CEBPE JASPAR yes 118290260
chr1 52999637 52999651 SPI1 JASPAR yes 118290261
chr1 52999637 52999651 SPIC JASPAR yes 118290262
chr1 52999638 52999651 ELF1 JASPAR yes 118290263
chr1 52999641 52999662 ZNF263 JASPAR yes 118290264
chr1 52999642 52999647 ETS2 TRANSFAC yes 118290265
chr1 52999649 52999663 STAT1 JASPAR yes 118290266
chr1 52999650 52999664 TCF7L2 JASPAR yes 118290267
chr1 52999650 52999665 LEF1 JASPAR yes 118290268
chr1 52999654 52999660 TCF4 TRANSFAC yes 118290269
chr1 52999663 52999668 MYB TRANSFAC yes 118290270
chr1 52999670 52999688 NR3C1 JASPAR yes 118290271
SNP sites on vista1595[chr1:52999324-52999688]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 52999383 rs116657708 T C no 310110
chr1 52999400 rs113837672 G A no 310111
chr1 52999417 rs115410959 A G no 310112
Genes possibly regulated by vista1595[chr1:52999324-52999688]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 52873954 53019159 - ZCCHC11 ENSG00000134744.9 53019159 0.76 0.99 700 80529
chr1 53068044 53074723 + GPX7 ENSG00000116157.5 53068044 0.84 0.89 701 31644
chr1 53099016 53135355 + FAM159A ENSG00000182183.10 53099016 0.97 0.94 702 672
Expression level of Genes
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miRNAs possibly regulated by vista1595[chr1:52999324-52999688]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results