EnhancerDB
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  3. vista1596[chr1:53020482-53020832]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1596[chr1:53020482-53020832]
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Tissue distribution of vista1596
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Transcription factor that possibly regulate vista1596[chr1:53020482-53020832]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 53020494 53020505 FOXA1 JASPAR yes 118290272
chr1 53020494 53020509 FOXA1 JASPAR yes 118290273
chr1 53020495 53020501 JUN TRANSFAC yes 118290274
chr1 53020495 53020506 FOXB1 JASPAR yes 118290275
chr1 53020495 53020506 FOXC1 JASPAR yes 118290276
chr1 53020495 53020507 FOXC2 JASPAR yes 118290277
chr1 53020496 53020507 FOXP2 JASPAR yes 118290278
chr1 53020498 53020505 FOXD2 JASPAR yes 118290279
chr1 53020498 53020505 FOXI1 JASPAR yes 118290280
chr1 53020498 53020505 FOXL1 JASPAR yes 118290281
chr1 53020498 53020505 FOXO4 JASPAR yes 118290282
chr1 53020498 53020505 FOXO6 JASPAR yes 118290283
chr1 53020498 53020505 FOXP3 JASPAR yes 118290284
chr1 53020498 53020506 FOXD1 JASPAR yes 118290285
chr1 53020498 53020506 FOXG1 JASPAR yes 118290286
chr1 53020498 53020506 FOXO3 JASPAR yes 118290287
chr1 53020503 53020507 YY1 TRANSFAC yes 118290288
chr1 53020504 53020512 FEV JASPAR yes 118290289
chr1 53020507 53020517 POU6F2 JASPAR yes 118290290
chr1 53020508 53020518 EMX1 JASPAR yes 118290291
chr1 53020508 53020518 EMX2 JASPAR yes 118290292
chr1 53020508 53020518 EVX1 JASPAR yes 118290293
chr1 53020508 53020518 EVX2 JASPAR yes 118290294
chr1 53020508 53020518 GBX1 JASPAR yes 118290295
chr1 53020508 53020518 GBX2 JASPAR yes 118290296
chr1 53020508 53020518 GSX1 JASPAR yes 118290297
chr1 53020508 53020518 HOXA2 JASPAR yes 118290298
chr1 53020508 53020518 HOXB2 JASPAR yes 118290299
chr1 53020508 53020518 HOXB3 JASPAR yes 118290300
chr1 53020508 53020518 LHX2 JASPAR yes 118290301
chr1 53020508 53020518 LHX6 JASPAR yes 118290302
chr1 53020508 53020518 MEOX1 JASPAR yes 118290303
chr1 53020508 53020518 MEOX2 JASPAR yes 118290304
chr1 53020508 53020518 NOTO JASPAR yes 118290305
chr1 53020508 53020518 POU6F1 JASPAR yes 118290306
chr1 53020509 53020517 DLX6 JASPAR yes 118290307
chr1 53020509 53020517 EN1 JASPAR yes 118290308
chr1 53020509 53020517 LBX1 JASPAR yes 118290309
chr1 53020509 53020517 PAX4 JASPAR yes 118290310
chr1 53020509 53020517 PDX1 JASPAR yes 118290311
chr1 53020509 53020517 VAX1 JASPAR yes 118290312
chr1 53020509 53020517 VAX2 JASPAR yes 118290313
chr1 53020509 53020517 VSX1 JASPAR yes 118290314
chr1 53020509 53020517 VSX2 JASPAR yes 118290315
chr1 53020513 53020520 NKX3-1 JASPAR yes 118290316
chr1 53020550 53020556 SOX10 JASPAR yes 118290317
chr1 53020564 53020575 FLI1 JASPAR yes 118290318
chr1 53020565 53020575 ERF JASPAR yes 118290319
chr1 53020565 53020575 ETS1 JASPAR yes 118290320
chr1 53020565 53020576 ETV2 JASPAR yes 118290321
chr1 53020565 53020578 ELF1 JASPAR yes 118290322
chr1 53020571 53020575 NFE TRANSFAC yes 118290323
chr1 53020582 53020596 SPI1 JASPAR yes 118290324
chr1 53020586 53020592 MZF1 JASPAR yes 118290325
chr1 53020591 53020599 CEBPA TRANSFAC yes 118290326
chr1 53020601 53020610 ZEB1 JASPAR yes 118290327
chr1 53020609 53020620 CDX2 JASPAR yes 118290328
chr1 53020611 53020620 CDX1 JASPAR yes 118290329
chr1 53020611 53020621 HOXA13 JASPAR yes 118290330
chr1 53020618 53020631 SCRT2 JASPAR yes 118290331
chr1 53020618 53020633 SCRT1 JASPAR yes 118290332
chr1 53020622 53020632 MSC JASPAR yes 118290333
chr1 53020634 53020637 MYB TRANSFAC yes 118290334
chr1 53020636 53020642 SOX10 JASPAR yes 118290335
chr1 53020646 53020650 LFA1 TRANSFAC yes 118290336
chr1 53020661 53020674 EOMES JASPAR yes 118290337
chr1 53020670 53020680 TEAD1 JASPAR yes 118290338
chr1 53020670 53020680 TEAD4 JASPAR yes 118290339
chr1 53020672 53020686 IRF7 JASPAR yes 118290340
chr1 53020685 53020692 JUN TRANSFAC yes 118290341
chr1 53020685 53020692 SP1 TRANSFAC yes 118290342
chr1 53020688 53020698 GABPA JASPAR yes 118290343
chr1 53020688 53020700 ELF1 JASPAR yes 118290344
chr1 53020690 53020696 ETS1 JASPAR yes 118290345
chr1 53020690 53020696 SPI1 JASPAR yes 118290346
chr1 53020712 53020726 NR2F1 JASPAR yes 118290347
chr1 53020726 53020730 NFE TRANSFAC yes 118290348
chr1 53020735 53020748 SMAD2 JASPAR yes 118290349
chr1 53020742 53020752 MAX JASPAR yes 118290350
chr1 53020742 53020754 HES5 JASPAR yes 118290351
chr1 53020742 53020754 PKNOX1 JASPAR yes 118290352
chr1 53020742 53020754 PKNOX2 JASPAR yes 118290353
chr1 53020742 53020754 TGIF1 JASPAR yes 118290354
chr1 53020742 53020754 TGIF2 JASPAR yes 118290355
chr1 53020742 53020762 TP53 JASPAR yes 118290356
chr1 53020743 53020753 CLOCK JASPAR yes 118290357
chr1 53020743 53020753 NEUROG2 JASPAR yes 118290358
chr1 53020764 53020768 LFA1 TRANSFAC yes 118290359
chr1 53020778 53020792 MTF1 JASPAR yes 118290360
chr1 53020792 53020803 GATA1 TRANSFAC yes 118290361
chr1 53020804 53020811 NFATC2 JASPAR yes 118290362
chr1 53020805 53020819 STAT1 JASPAR yes 118290363
chr1 53020805 53020820 STAT2 JASPAR yes 118290364
chr1 53020817 53020830 SMAD2 JASPAR yes 118290365
chr1 53020818 53020823 SP1 TRANSFAC yes 118290366
SNP sites on vista1596[chr1:53020482-53020832]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 53020530 rs182363620 C A no 310192
chr1 53020722 rs530060869 A G
NR2F1
310193
Genes possibly regulated by vista1596[chr1:53020482-53020832]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 52873954 53019159 - ZCCHC11 ENSG00000134744.9 53019159 0.76 0.99 700 98677
chr1 53068044 53074723 + GPX7 ENSG00000116157.5 53068044 0.84 0.89 701 52788
chr1 53099016 53135355 + FAM159A ENSG00000182183.10 53099016 0.97 0.94 702 21816
Expression level of Genes
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miRNAs possibly regulated by vista1596[chr1:53020482-53020832]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results