EnhancerDB
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  3. vista1599[chr1:53101245-53101408]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1599[chr1:53101245-53101408]
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Tissue distribution of vista1599
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Transcription factor that possibly regulate vista1599[chr1:53101245-53101408]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 53101249 53101253 NFE TRANSFAC yes 28898928
chr1 53101249 53101253 NFE TRANSFAC yes 118290532
chr1 53101251 53101265 IRF7 JASPAR yes 28898929
chr1 53101251 53101265 IRF7 JASPAR yes 118290533
chr1 53101252 53101267 PRDM1 JASPAR yes 28898930
chr1 53101252 53101267 PRDM1 JASPAR yes 118290534
chr1 53101253 53101265 IRF1 JASPAR yes 28898931
chr1 53101253 53101265 IRF1 JASPAR yes 118290535
chr1 53101257 53101263 TCF4 TRANSFAC yes 28898932
chr1 53101257 53101263 TCF4 TRANSFAC yes 118290536
chr1 53101295 53101305 HOXD11 JASPAR yes 28898933
chr1 53101295 53101305 HOXD11 JASPAR yes 118290537
chr1 53101295 53101306 HOXC11 JASPAR yes 28898934
chr1 53101295 53101306 HOXC12 JASPAR yes 28898935
chr1 53101295 53101306 HOXC11 JASPAR yes 118290538
chr1 53101295 53101306 HOXC12 JASPAR yes 118290539
chr1 53101336 53101347 USF1 JASPAR yes 28898936
chr1 53101336 53101347 USF1 JASPAR yes 118290540
chr1 53101337 53101347 SREBF2 JASPAR yes 28898937
chr1 53101337 53101347 TFE3 JASPAR yes 28898938
chr1 53101337 53101347 TFEB JASPAR yes 28898939
chr1 53101337 53101347 TFEC JASPAR yes 28898940
chr1 53101337 53101347 SREBF2 JASPAR yes 118290541
chr1 53101337 53101347 TFE3 JASPAR yes 118290542
chr1 53101337 53101347 TFEB JASPAR yes 118290543
chr1 53101337 53101347 TFEC JASPAR yes 118290544
chr1 53101337 53101348 USF1 JASPAR yes 28898941
chr1 53101337 53101348 USF2 JASPAR yes 28898942
chr1 53101337 53101348 USF1 JASPAR yes 118290545
chr1 53101337 53101348 USF2 JASPAR yes 118290546
chr1 53101339 53101352 NR2F1 JASPAR yes 28898943
chr1 53101339 53101352 NR2F1 JASPAR yes 118290547
chr1 53101342 53101350 NR4A2 JASPAR yes 28898944
chr1 53101342 53101350 NR4A2 JASPAR yes 118290548
chr1 53101378 53101381 MYB TRANSFAC yes 28898945
chr1 53101378 53101381 MYB TRANSFAC yes 118290549
chr1 53101381 53101392 RUNX1 JASPAR yes 28898946
chr1 53101381 53101392 RUNX1 JASPAR yes 118290550
chr1 53101382 53101392 RUNX3 JASPAR yes 28898947
chr1 53101382 53101392 RUNX3 JASPAR yes 118290551
chr1 53101383 53101392 RUNX2 JASPAR yes 28898948
chr1 53101383 53101392 RUNX2 JASPAR yes 118290552
chr1 53101388 53101398 NOTO JASPAR yes 28898949
chr1 53101388 53101398 NOTO JASPAR yes 118290553
chr1 53101403 53101406 MYB TRANSFAC yes 28898950
chr1 53101403 53101406 MYB TRANSFAC yes 118290554
chr1 53101405 53101411 SOX10 JASPAR yes 28898951
chr1 53101405 53101411 SOX10 JASPAR yes 118290555
SNP sites on vista1599[chr1:53101245-53101408]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 53101329 rs574144569 A C no 310539
Genes possibly regulated by vista1599[chr1:53101245-53101408]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 52873954 53019159 - ZCCHC11 ENSG00000134744.9 53019159 0.76 0.99 700 17914
chr1 53068044 53074723 + GPX7 ENSG00000116157.5 53068044 0.84 0.89 701 66799
chr1 53099016 53135355 + FAM159A ENSG00000182183.10 53099016 0.97 0.94 702 97771
chr1 53152508 53164038 - SELRC1 ENSG00000162377.4 53164038 0.77 0.99 703 37370
chr1 53192126 53293014 + ZYG11B ENSG00000162378.8 53192126 0.58 0.99 704 9282
Expression level of Genes
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miRNAs possibly regulated by vista1599[chr1:53101245-53101408]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results