EnhancerDB
  1. Home
  2. Enhancers
  3. vista1600[chr1:53102258-53102490]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1600[chr1:53102258-53102490]
Back to top
Tissue distribution of vista1600
Back to top
Transcription factor that possibly regulate vista1600[chr1:53102258-53102490]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 53102437 53102753 EBF1 UCSC Txn Factor no Conserved 107803726
chr1 53102437 53102753 EBF1 UCSC Txn Factor no Conserved 107803727
chr1 53102252 53102266 STAT1 JASPAR yes 28899047
chr1 53102252 53102266 STAT1 JASPAR yes 118290556
chr1 53102252 53102267 PRDM1 JASPAR yes 28899048
chr1 53102252 53102267 STAT2 JASPAR yes 28899049
chr1 53102252 53102267 PRDM1 JASPAR yes 118290557
chr1 53102252 53102267 STAT2 JASPAR yes 118290558
chr1 53102314 53102321 JUN TRANSFAC yes 28899050
chr1 53102314 53102321 SP1 TRANSFAC yes 28899051
chr1 53102314 53102321 JUN TRANSFAC yes 118290559
chr1 53102314 53102321 SP1 TRANSFAC yes 118290560
chr1 53102328 53102332 YY1 TRANSFAC yes 28899052
chr1 53102328 53102332 YY1 TRANSFAC yes 118290561
chr1 53102340 53102344 NFE TRANSFAC yes 28899053
chr1 53102340 53102344 NFE TRANSFAC yes 118290562
chr1 53102340 53102354 NR2F1 JASPAR yes 28899054
chr1 53102340 53102354 NR2F1 JASPAR yes 118290563
chr1 53102341 53102346 GATA2 JASPAR yes 28899055
chr1 53102341 53102346 GATA2 JASPAR yes 118290564
chr1 53102357 53102370 EOMES JASPAR yes 28899056
chr1 53102357 53102370 EOMES JASPAR yes 118290565
chr1 53102359 53102370 TBX2 JASPAR yes 28899057
chr1 53102359 53102370 TBX2 JASPAR yes 118290566
chr1 53102360 53102370 TBX21 JASPAR yes 28899058
chr1 53102360 53102370 TBX21 JASPAR yes 118290567
chr1 53102373 53102389 SOX4 JASPAR yes 28899059
chr1 53102373 53102389 SOX4 JASPAR yes 118290568
chr1 53102388 53102392 YY1 TRANSFAC yes 28899060
chr1 53102388 53102392 YY1 TRANSFAC yes 118290569
chr1 53102396 53102411 TP53 JASPAR yes 28899061
chr1 53102396 53102411 TP53 JASPAR yes 118290570
chr1 53102426 53102430 NFE TRANSFAC yes 28899062
chr1 53102426 53102430 NFE TRANSFAC yes 118290571
chr1 53102426 53102431 GATA1 TRANSFAC yes 28899063
chr1 53102426 53102431 GATA1 TRANSFAC yes 118290572
chr1 53102426 53102432 GATA3 JASPAR yes 28899064
chr1 53102426 53102432 GATA3 JASPAR yes 118290573
chr1 53102432 53102443 NFKB1 JASPAR yes 28899065
chr1 53102432 53102443 NFKB1 JASPAR yes 118290574
chr1 53102482 53102486 NFE TRANSFAC yes 28899066
chr1 53102482 53102486 NFE TRANSFAC yes 118290575
chr1 53102490 53102510 TP63 JASPAR yes 28899067
chr1 53102490 53102510 TP63 JASPAR yes 118290576
chr1 53102490 53102510 TP63 JASPAR yes 118290577
SNP sites on vista1600[chr1:53102258-53102490]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
Genes possibly regulated by vista1600[chr1:53102258-53102490]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 52873954 53019159 - ZCCHC11 ENSG00000134744.9 53019159 0.76 0.99 700 16901
chr1 53068044 53074723 + GPX7 ENSG00000116157.5 53068044 0.84 0.89 701 65786
chr1 53099016 53135355 + FAM159A ENSG00000182183.10 53099016 0.97 0.94 702 96758
chr1 53152508 53164038 - SELRC1 ENSG00000162377.4 53164038 0.77 0.99 703 38452
chr1 53192126 53293014 + ZYG11B ENSG00000162378.8 53192126 0.58 0.99 704 10364
Expression level of Genes
Back to top
miRNAs possibly regulated by vista1600[chr1:53102258-53102490]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results