EnhancerDB
  1. Home
  2. Enhancers
  3. vista1602[chr1:53107017-53107249]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1602[chr1:53107017-53107249]
Back to top
Tissue distribution of vista1602
Back to top
Transcription factor that possibly regulate vista1602[chr1:53107017-53107249]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 53107022 53107025 MYB TRANSFAC yes 118290750
chr1 53107042 53107046 YY1 TRANSFAC yes 118290751
chr1 53107042 53107053 FOXA1 JASPAR yes 118290752
chr1 53107053 53107068 HSF1 JASPAR yes 118290753
chr1 53107054 53107067 HSF1 JASPAR yes 118290754
chr1 53107054 53107067 HSF2 JASPAR yes 118290755
chr1 53107054 53107067 HSF4 JASPAR yes 118290756
chr1 53107087 53107099 PBX1 JASPAR yes 118290757
chr1 53107093 53107098 ATF1 TRANSFAC yes 118290758
chr1 53107100 53107105 TFAP2A TRANSFAC yes 118290759
chr1 53107100 53107106 MZF1 JASPAR yes 118290760
chr1 53107100 53107113 NFKB2 JASPAR yes 118290761
chr1 53107101 53107112 NFKB1 JASPAR yes 118290762
chr1 53107101 53107114 NFKB1 JASPAR yes 118290763
chr1 53107101 53107114 NFKB2 JASPAR yes 118290764
chr1 53107102 53107113 NFKB1 JASPAR yes 118290765
chr1 53107103 53107113 NFKB1 JASPAR yes 118290766
chr1 53107103 53107113 RELA JASPAR yes 118290767
chr1 53107103 53107113 REL JASPAR yes 118290768
chr1 53107103 53107114 NFKB1 JASPAR yes 118290769
chr1 53107104 53107114 REL JASPAR yes 118290770
chr1 53107108 53107118 ZNF740 JASPAR yes 118290771
chr1 53107115 53107127 TAL1 JASPAR yes 118290772
chr1 53107117 53107129 TAL1 JASPAR yes 118290773
chr1 53107130 53107150 RREB1 JASPAR yes 118290774
chr1 53107133 53107153 RREB1 JASPAR yes 118290775
chr1 53107135 53107155 RREB1 JASPAR yes 118290776
chr1 53107154 53107160 PEA3 TRANSFAC yes 118290777
chr1 53107158 53107172 SPI1 JASPAR yes 118290778
chr1 53107158 53107172 SPIC JASPAR yes 118290779
chr1 53107159 53107173 STAT1 JASPAR yes 118290780
chr1 53107163 53107168 ETS2 TRANSFAC yes 118290781
chr1 53107177 53107182 ETS2 TRANSFAC yes 118290782
chr1 53107184 53107204 ESR1 JASPAR yes 118290783
chr1 53107186 53107197 USF1 JASPAR yes 118290784
chr1 53107186 53107197 USF2 JASPAR yes 118290785
chr1 53107187 53107205 ESR1 JASPAR yes 118290786
chr1 53107189 53107204 ESR2 JASPAR yes 118290787
chr1 53107202 53107216 TLX1 JASPAR yes 118290788
chr1 53107209 53107214 SP1 TRANSFAC yes 118290789
chr1 53107210 53107225 TFAP2A JASPAR yes 118290790
chr1 53107210 53107225 TFAP2C JASPAR yes 118290791
SNP sites on vista1602[chr1:53107017-53107249]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 53107044 rs12084668 A G
FOXA1 YY1
310591
chr1 53107136 rs114161312 T A
RREB1
310592
chr1 53107165 rs528094165 A G
ETS2 SPI1 SPIC STAT1
310593
Genes possibly regulated by vista1602[chr1:53107017-53107249]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 52873954 53019159 - ZCCHC11 ENSG00000134744.9 53019159 0.76 0.99 700 12142
chr1 53068044 53074723 + GPX7 ENSG00000116157.5 53068044 0.84 0.89 701 61027
chr1 53099016 53135355 + FAM159A ENSG00000182183.10 53099016 0.97 0.94 702 91999
chr1 53152508 53164038 - SELRC1 ENSG00000162377.4 53164038 0.77 0.99 703 43211
chr1 53192126 53293014 + ZYG11B ENSG00000162378.8 53192126 0.58 0.99 704 15123
Expression level of Genes
Back to top
miRNAs possibly regulated by vista1602[chr1:53107017-53107249]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
Back to top
No results