EnhancerDB
  1. Home
  2. Enhancers
  3. vista1607[chr1:53403571-53403705]
View enhancers around input chromosomal region
Back to top

Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1607[chr1:53403571-53403705]
Back to top
Tissue distribution of vista1607
Back to top
Transcription factor that possibly regulate vista1607[chr1:53403571-53403705]
Back to top
Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 53403574 53403585 FOXH1 JASPAR yes 118290950
chr1 53403575 53403581 ZNF354C JASPAR yes 118290951
chr1 53403576 53403593 BCL6B JASPAR yes 118290952
chr1 53403588 53403603 MEF2A JASPAR yes 118290953
chr1 53403589 53403604 MEF2C JASPAR yes 118290954
chr1 53403590 53403602 MEF2A JASPAR yes 118290955
chr1 53403590 53403602 MEF2B JASPAR yes 118290956
chr1 53403590 53403602 MEF2D JASPAR yes 118290957
chr1 53403591 53403601 MEF2A JASPAR yes 118290958
chr1 53403594 53403598 YY1 TRANSFAC yes 118290959
chr1 53403615 53403625 SP1 JASPAR yes 118290960
chr1 53403616 53403626 SP1 JASPAR yes 118290961
chr1 53403619 53403624 SP1 TRANSFAC yes 118290962
chr1 53403632 53403647 HSF1 JASPAR yes 118290963
chr1 53403633 53403646 HSF1 JASPAR yes 118290964
chr1 53403633 53403646 HSF2 JASPAR yes 118290965
chr1 53403633 53403646 HSF4 JASPAR yes 118290966
chr1 53403634 53403649 STAT1 JASPAR yes 118290967
chr1 53403635 53403650 STAT1 JASPAR yes 118290968
chr1 53403636 53403647 STAT1 JASPAR yes 118290969
chr1 53403636 53403647 STAT3 JASPAR yes 118290970
chr1 53403637 53403648 STAT1 JASPAR yes 118290971
chr1 53403637 53403648 STAT3 JASPAR yes 118290972
chr1 53403641 53403648 NFATC2 JASPAR yes 118290973
chr1 53403646 53403664 ESR2 JASPAR yes 118290974
chr1 53403648 53403658 SP1 JASPAR yes 118290975
chr1 53403648 53403663 ESR2 JASPAR yes 118290976
chr1 53403648 53403668 ESR1 JASPAR yes 118290977
chr1 53403649 53403653 LFA1 TRANSFAC yes 118290978
chr1 53403654 53403664 NFKB1 JASPAR yes 118290979
chr1 53403654 53403665 NFKB1 JASPAR yes 118290980
chr1 53403658 53403669 EBF1 JASPAR yes 118290981
chr1 53403659 53403665 MZF1 JASPAR yes 118290982
chr1 53403671 53403675 TEAD2 TRANSFAC yes 118290983
chr1 53403673 53403676 MYB TRANSFAC yes 118290984
SNP sites on vista1607[chr1:53403571-53403705]
Back to top
chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 53403672 rs148505157 T TATAAG
TEAD2
311590
chr1 53403672 rs370227459 T TATAAG
TEAD2
311591
Genes possibly regulated by vista1607[chr1:53403571-53403705]
Back to top
Details of Genes
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 53308183 53360670 + ZYG11A ENSG00000203995.5 53308183 0.94 0.96 705 4612
chr1 53361656 53392884 - ECHDC2 ENSG00000121310.12 53392884 0.86 1.0 706 89313
chr1 53392901 53517375 + SCP2 ENSG00000116171.12 53392901 0.91 0.98 707 89330
Expression level of Genes
Back to top
miRNAs possibly regulated by vista1607[chr1:53403571-53403705]
Back to top
Details of miRNAs
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
chr1 53406042 53406062 + hsa-miR-1273g-3p MIMAT0022742 53392957 0.0026611886642700405 0.622344 0.676023 46
Expression level of miRNAs
Back to top