EnhancerDB
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  3. vista1608[chr1:53482500-53482782]
View enhancers around input chromosomal region
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Input Chromosomal region, for example: chr1:1000-10000 to view the enhancers around this region

Chromosome characteristics of vista1608[chr1:53482500-53482782]
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Tissue distribution of vista1608
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Transcription factor that possibly regulate vista1608[chr1:53482500-53482782]
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Chrom. Start End TF Name Source Predicted site? Tissue/Cell line id More
chr1 53482511 53482523 HLF JASPAR yes 118290985
chr1 53482512 53482524 HNF1B JASPAR yes 118290986
chr1 53482518 53482522 YY1 TRANSFAC yes 118290987
chr1 53482521 53482541 ESR1 JASPAR yes 118290988
chr1 53482524 53482542 ESR2 JASPAR yes 118290989
chr1 53482525 53482542 ESR1 JASPAR yes 118290990
chr1 53482525 53482543 ESR2 JASPAR yes 118290991
chr1 53482526 53482541 ESR2 JASPAR yes 118290992
chr1 53482526 53482546 ESR1 JASPAR yes 118290993
chr1 53482535 53482552 RARA JASPAR yes 118290994
chr1 53482538 53482542 YY1 TRANSFAC yes 118290995
chr1 53482560 53482575 HNF4G JASPAR yes 118290996
chr1 53482561 53482575 NR2F1 JASPAR yes 118290997
chr1 53482561 53482576 HNF4A JASPAR yes 118290998
chr1 53482571 53482583 TEAD1 JASPAR yes 118290999
chr1 53482574 53482582 TEAD3 JASPAR yes 118291000
chr1 53482610 53482616 HiNF-A TRANSFAC yes 118291001
chr1 53482610 53482626 SOX8 JASPAR yes 118291002
chr1 53482619 53482632 ATF4 JASPAR yes 118291003
chr1 53482620 53482631 CEBPA JASPAR yes 118291004
chr1 53482621 53482632 CEBPB JASPAR yes 118291005
chr1 53482622 53482633 CEBPB JASPAR yes 118291006
chr1 53482623 53482634 CEBPA JASPAR yes 118291007
chr1 53482638 53482647 SRY JASPAR yes 118291008
chr1 53482640 53482649 SOX9 JASPAR yes 118291009
chr1 53482647 53482662 NR2C2 JASPAR yes 118291010
chr1 53482655 53482663 NR4A2 JASPAR yes 118291011
chr1 53482657 53482661 ESR1 TRANSFAC yes 118291012
chr1 53482662 53482666 YY1 TRANSFAC yes 118291013
chr1 53482685 53482689 YY1 TRANSFAC yes 118291014
chr1 53482694 53482704 GSX2 JASPAR yes 118291015
chr1 53482695 53482703 BARX1 JASPAR yes 118291016
chr1 53482697 53482712 HNF1A JASPAR yes 118291017
chr1 53482712 53482724 GRHL1 JASPAR yes 118291018
chr1 53482713 53482723 TFCP2 JASPAR yes 118291019
chr1 53482726 53482739 POU2F2 JASPAR yes 118291020
chr1 53482739 53482745 LEF1 TRANSFAC yes 118291021
chr1 53482739 53482745 SOX10 JASPAR yes 118291022
chr1 53482747 53482751 TEAD2 TRANSFAC yes 118291023
chr1 53482749 53482752 MYB TRANSFAC yes 118291024
chr1 53482761 53482765 YY1 TRANSFAC yes 118291025
chr1 53482763 53482775 DBP JASPAR yes 118291026
chr1 53482763 53482775 HLF JASPAR yes 118291027
chr1 53482765 53482773 GMEB2 JASPAR yes 118291028
chr1 53482765 53482776 NFIL3 JASPAR yes 118291029
SNP sites on vista1608[chr1:53482500-53482782]
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chrom Position dbSNP ID Reference Allele Alternative Allele is SNP in TFBS id More
chr1 53482526 rs17107576 T C
ESR1 ESR2
311723
chr1 53482557 rs146201087 G A no 311724
chr1 53482662 rs17107579 A C
NR2C2 NR4A2 YY1
311725
Genes possibly regulated by vista1608[chr1:53482500-53482782]
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Details of Genes
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand Gene Name Ensembl ID TSS TSI of Normal tissues TSI of Cancer tissues Distance between enhancer and TSS id More
chr1 53361656 53392884 - ECHDC2 ENSG00000121310.12 53392884 0.86 1.0 706 10384
chr1 53392901 53517375 + SCP2 ENSG00000116171.12 53392901 0.91 0.98 707 10401
chr1 53527854 53551174 + PODN ENSG00000174348.9 53527854 0.89 1.0 708 54928
Expression level of Genes
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miRNAs possibly regulated by vista1608[chr1:53482500-53482782]
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Details of miRNAs
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom Start End Strand miRNA Name miRBase ID TSS Score TSI of Normal tissues TSI of Cancer tissues id More
Expression level of miRNAs
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No results